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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0021400 |
| Transcript ID | LotjaGi3g1v0021400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histidine phosphotransfer protein; TAIR: AT3G16360.2 HPT phosphotransmitter 4; Swiss-Prot: sp|Q6F303|PHP5_ORYSJ Pseudo histidine-containing phosphotransfer protein 5; TrEMBL-Plants: tr|G7IHZ9|G7IHZ9_MEDTR Histidine phosphotransfer protein; Found in the gene: LotjaGi3g1v0021400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:2237412..2239735) extracted from Lotus japonicus Gifu genome v1.2.
CCCACTTCCAAATCATGCATTTCCCACCTTCTTAGCTTTCAACTTCATCTTTATACTCTCCCTGTCCCTTCAGCTTCTTC ATTCTCTCTGACATATACATTTCTAACATTATAATGGACAGAAACAATTCCCGTAGACAAGTTGCTGCAGTGAAACAGTC CCTCTTTGATCAGGTTCTTACCCATTTTTTGAGCTTTTTACTCAGTGCACCTGAATGTGTTTGGATTTCTGTTAGCAAAT CCAAATACACATTCATTATGAGCAATTTATTCAACTTGAAGAAATGCAAGATGATTAGAAGGAAATTTTCTGAGATTTTG AATACTTTTCCATTGCAGGGTCATCTGGATGAGCAGTTTATTCAACTTGAAGAATTGCAGGATGATGCTAACCCAAATTT TGTTGAGGAAATAGTGACTCTTTACTACCGCGATTCATCAAGACTTGTATCAAGCTTGGAGCATACACTGTAAGTTGATT AATTTCATATCATACATCTTATGTTTTTCTTTACATTCTCTGTTTTATTGTTTCTGTTCATGTTATTTAAAGTTGGTATC ATATTTGTGCTTGTGGCAGGGAGAGGAACCCAGTGGATTTCAATAAGCTGGACACAATTATGCATCAGTTTAAAGGAAGC AGCTCAAGGTAAACAATTAAACATGGCACAATTAACAGAAATTTGAGTTGAGTTAATTACTATTATCATAAGGTGCATCT ATGCATAATAACTATGTTGCTTCATTATGTTTTGCAGCATAGGGGCCAAAAAGGTGAAAGCAGAATGCACTCTGTTTAGT CAATATTGCAAGGCAGGAAATGCAGAAGGGTAATCTACCTTGCACTTAATCTCCCTTTACTAACAATCACACTAGCATTT CTTCAAGGCCCCCTTTTCTTTTACCTCTTAATCTTATATACTACATATAAAATTTGAAAAAATTTAAAATTCCTAAATAA CATTGATTTTTAAATACCATAATGGTACATCCACCCTATCTCCACTTAATTTTTATATTTAGCTATTTCTTTATGCGTTT TTGTCGCATCATATCATCTATCATATTTTTCACTTTCACAAATAGTTTTCCTATCCTAAATAGTGATGTAGAAGTGTTGT TTTGTGTGAATGTGCAGATGCAGGAAGAGCTTCCAACAAATGAAGAAAGAATATTCAGCACTGAGAAAGAAACTTGAAAC TTATTTTCAGGTGAAAAAAAGAGAATATATTTATATTTAAATTTGTTGTTTTGTGTAGTTTGGTAACTAAGTAAGTTCCT TTTTTTGCCTTGTGCAGCTAGCTAGGCAAGCTGGTCCCTTGGACAGAGCATGTCGCCCCAAGTGAAGAGCTTATAATTAT TCAAAATGATTGACTGACATATCATTTCGCAAGACATCATTCCGGCATACAACTTAAAGACGGTTTTTAACCTCTAAAAA ACAAGTGTAATTGGTGAATTTTGTGACCGTAGAAAAATTACATGTTCACCGCTAGAATTGGAAAGGCAACATAGCCTGTT AGAGAATATTATATGCTTCCAAATATCAGTTTTGTTTTCAAATGTTGTAAGAATCTTGAGTTTATACTATCACTATTATT ACAGAACTTTACATGGTACATCAATTTACAAGTCCCATAACTGTGATTTTTCTGTATCCTTTAATTTGGTGTCAATCATC AAAGCCCTTTTCTCGTATCAAAACTCAAAATTATTTGAAAAACAGAAGGGACACTGCCGTACCCAAAGCAAGCAACATAG CTATTGAAGAGACCCAATAAACAAGAAACAAACACGCATGCTTGTCTGCTAAAACCTTGTCTAAACTAGATGCCTTCTCT TTAGTGAATCTCCTTAAAAAGGACAGTTTAATAAAATATCTTATTTTTATTTTTTCATAACACCACACCATTATTTATTA TGTTCCATAATTTAACTATTTTTTTAAATTTAATTCAACAATTATAAAAAAAATTAAATAAACTCCACCATATATCTTGC ACTTTTATATTTTATTATTTACTCATTTATCTACTATGATTAGGAACAATATGTCTTATTAGTTTGTAATGGAAGACATT TTTGTTCTCATTTTAATCAAACAAAATATGGGAATAGATGGAGTGACAACCCTCGGAGGAGTCGTCTAAAGAGATTTCGG CAACTAGGGATGGTTCAGACTTGGTCATATTGACGATGCACCAATGGAAAGGCCAACTAGGGCGCAGAGGTGGAGTTGAG AAGACATAGCTGAGCGGAAATCCAGCACCGAGAAGACGATGTTGAGGTGTCATTTAAGATGATGTAGAAAAGCCACATCA TAAG
CDS sequence (LotjaGi3g1v0021400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAGAAACAATTCCCGTAGACAAGTTGCTGCAGTGAAACAGTCCCTCTTTGATCAGGGTCATCTGGATGAGCAGTT TATTCAACTTGAAGAATTGCAGGATGATGCTAACCCAAATTTTGTTGAGGAAATAGTGACTCTTTACTACCGCGATTCAT CAAGACTTGTATCAAGCTTGGAGCATACACTGGAGAGGAACCCAGTGGATTTCAATAAGCTGGACACAATTATGCATCAG TTTAAAGGAAGCAGCTCAAGCATAGGGGCCAAAAAGGTGAAAGCAGAATGCACTCTGTTTAGTCAATATTGCAAGGCAGG AAATGCAGAAGGATGCAGGAAGAGCTTCCAACAAATGAAGAAAGAATATTCAGCACTGAGAAAGAAACTTGAAACTTATT TTCAGCTAGCTAGGCAAGCTGGTCCCTTGGACAGAGCATGTCGCCCCAAGTGA
Protein sequence (LotjaGi3g1v0021400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDRNNSRRQVAAVKQSLFDQGHLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLVSSLEHTLERNPVDFNKLDTIMHQ FKGSSSSIGAKKVKAECTLFSQYCKAGNAEGCRKSFQQMKKEYSALRKKLETYFQLARQAGPLDRACRPK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 149 | 149 | 5.8E-81 | – | |
| PANTHER | 1 | 149 | 149 | 5.8E-81 | – | |
| Gene3D | 1 | 144 | 144 | 4.8E-48 | ||
| SUPERFAMILY | 7 | 139 | 133 | 9.94E-34 | ||
| ProSiteProfiles | 38 | 133 | 96 | 11.836 | ||
| Pfam | 44 | 127 | 84 | 5.9E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. |
Expression pattern of LotjaGi3g1v0021400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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