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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0023900 |
| Transcript ID | LotjaGi3g1v0023900.7 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; TAIR: AT1G51690.1 protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform; Swiss-Prot: sp|Q38821|2ABA_ARATH Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform; TrEMBL-Plants: tr|A0A068TPF8|A0A068TPF8_COFCA Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Found in the gene: LotjaGi3g1v0023900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:2631482..2640344) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTGCTCACATGTTATAGCGATGGTGAAACTTTCATATCAGCCGATGATTTGCGAATAAATCTCTGGAACCTGGAAAT TAGCAATCAAAGTTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACAGGTAAGCTTGGTGAAAAATTTT ATCCTGCAGTATAAACATCTTTTTCGGTACCTTGGTAAAACACCAAAACTAATTATTTTAGAGTTGAAGAAGGTATGGCA AGTTGGCAACATGTAAGTTGTAGTGTATTGACAAGTGGGTGCTCAAGGCCCACCCTATCTGAATAACTCATCCTATCTCA ACTCTCAAGCCATTCAGGATTTCAGGTTATTCTGGACCTGGTTCATCTTGAATTTTGGGCTGGTTCCAGGCTCAAATTAA TGTCCTGAAGTAAATATCAGGCTGGGGACTGTTTACCCATTTGGATAGATCCAACCCTGATTGATGCTCTATATTTGTTT GTAATTTACAATTTTTTACATTAACCATATCAACTTTTTCAATATTAGAAGAAACTAGTTGCTTTAAGGTGATTGAAAAA ATCACTTGTCCTTTAGCCTAGGTTTGGATTGGTGGAATGAGTTGGGGAGGAATGGAGTGCATAGTAGTCAATAGTGCGCT ATAGCGGTGTAGCGGAGCGGAGCAGCTCCTTGCCGCTATTGAAATGAAATAGCGGCGCACTTCACAATAGCGGCCGTAGC GGCGTGAATAGCGGCCAAAATAGCGGCAGATCGCGGCCGGGAAATAGTGGCGCTATATGGACAAAGGGAAAAATGACTTA AGCCCCTCGGTTTTAAAATTGTTGGGAAACCTTTTTAGGACTTCTCAGGACTATTTTATGTCAACCTTGAAAGAATGAAG CTTCATTCTTCATTCAGATTTGCAAATCCGACTTCTTTACCTTGCTTTTGAGTGGTTTTTAGATGTGTGTTATTGTTCAA GACTTATGATTTTTATTTCTATTATGAATGTTATGAATTTTAGGCAATATTTGACATTTTTTGGCATTTATATGTATATA GTAGTATACTATTAATTATATATAAAAAATATGAATAGCGGCCATCCCGCTATGCGCTATCCCGCTATCCCACTTTTGGG GTCGGCCGCTACGCACCGCTATCCGGGATTGACTACTATGATGGAGTGGAACCGTGTTGGTTTCCATTGTTTCGATTTTA AATTAGGGTCACAAGGGGGGTAGGGGGCGATGAACCCTAATTTTTTTGTTGATGTTATTACAATATTATCTTTTCATCCT TACACGCTGTTCTAACCAAATTCTTGTCTTGACGTAGTTGCATTTTGTTGCCTCTGGCCATTTCCTTAGAAGATGTTCTT GACCTTTCTCCACTGAAACTGTTTTATGGCATGATGTGGTTGACTTTTATGTCTTGAGTGATCCTCCAACTTTTTTGTCC AGCATAAAATATTATTAATTTCAGTAATTAATTAACTATTTTTCCAACGTATAGTTACATTTGGAGTAGTCGAAAACAAC ATTCCTTTTTCTTTAGACATTGAACTTATAATGTGATGAATTCTCGGCATCATGTTATGTTACTGATGTGTGTTGACTGC TGCATGGGCATTTGCATTTGAAAGTGCACATAGCCACAAACGAAAATACATTTTGCTTTCGTAGAACATAAATCTGCCAC TTTTATTTAGAAACCTTATAGTTGGTTATTTTGGTTAATTTGGAACATATAAAAGTTTACATCTAAGATCTATTCCAAGG GTATCCACCTGGCTTTTTTTCTTTTCCAACTATGCACCTAACTTTCTTCCTCCAACTTTTGGTCTGCCTTGATCACAGGC AGAAGAGGATCTATAGTCTTGGTGCTTATGGAAACAACGTTCTAAATTCCAGCTAAACATCATATGATTAAAAATTTCTT TATCAAAGGCATAATTGCAAGCATATAACTTTCTTTTGAAGGGCAATATAGGAATATAAAAGTTATAATTCATTCCGTTT TTTTCCACTTCTGAAATGATGGATTCATTTCATCATAAAATATCCAAACAAGGGAGTGAACCGTTTACTTCTTTCTGTTT CGCGCTGTTTTGTTCTATACCATCCCTTCCTATTTTATTTCATTATTTTCCATCAATCCAAACATACCACAACAACAACC AAACCTTTTCGACTAGGTAGGGTCGATTCCATGGATCAAGCTGTAGTACTACCCTCCATCTGGTCAACCCTCCCAATTGG TGCGTTTGTGGGTCATCTCATTACATGATTGAACCACTTAAGGCAAAACGCTACCATGTTTTGTACATTGGGGATTACCT AATTTTTTTCTCTAAAAACTTTTTTTCTTATTCTATGTGTTATTGTATATACACTGATCCACCGTATCATTCTCATCTCT GAGGCATTGATTTTACCGCTCAACATTCAGCCCCATGCCGCATTGCAGGTGTTATAGTTGTACGGTAAAATGTCCCTTTA AGTTTGAGTGGCACTTTCTATCACAAATAACACTCGACGAATTCCTTCATTTTGTCCACCTGGCTTGGATCTTACGGTTG ACATATCTCCTTTTCATTTTGTATGATAGATCCAAGGTATTTAAAATACGATACTAGTGGTATTATATAATCTCCAAATT TCACATCTATGTTTAACTTATTGTGTCACTTGCTAAACGTACGTTCCATATACTCGATTTTACTTCTAATTAGGAGAAAA CTATTGTTTCCAATGCTTGTCTCCATGACTCTAGTCCTTCATTTTTTTCATCCCTCGATTCTCCAGCTAAGACTGTATCA TCTGCAAAAAGCAGCACTGAGGCATCATCTCTTTGATATGTTCATTATGCATGTCAAAATGTCAATAACTGAGTTGAAAA GATAAATGCTCAAAGTTGACCCTTGATGCGCCCCACGGTATGGGGAAATTATTAGTATTCTCACACTACACTAGCCGTGG CCCCTCATACGTTTCTTTGATTGCTTAATGTTAGCAATCATAATTTTTCTGTTTTAAAGCTTTCCATTAAACCCCTCTAG GTACTCTATCATATGCCTTTCCAAATCTATGAAAAGTTGAAAAACATTTGGTGGTCTTTCCAATTTATCTAATCTATCTC TATTAATCTTCTTAACAAGTAGTCAAGCTTCCATGGTTGATCTCCCCGACATAAGACCAAATTGATTTTCTGTGATGTGG GTCTTTTGTCTTAATCTCCTTTCATTCAGTTTTTTTTAAAGCTTTATAGAATGACTAGTAAATTTTATCCATCAATAAGT TGGGTAGCTTTGTATGTCACTTTTGTTTTTAAAAGTTGGCAACTTGGCATAAAAGTACTCCATTCATTCGACATGCTCTT GGACTTCACAATCATGTGTAACAGTTGTGTGAGTCATCTAGTAAGTAGTATCTTTTTCTCCTAGTCCCTGCCATACCTCA ACAGGTATGTTATCTGGTCCAACCGCCTTACTATTGTTCATCTTCGTTGAAGCTTCCTCTACCTCCAATTCTCTTATTCT TCAATAATAGGAGTAATTTTGATCCTCCCTTCTAGTGTTAAGGCTATAATGTTCAGTGTACTCATGTCCTTCACGAAAAT GTTGATGAAAAGGCCTCCTCCATCTTTCCTTGATATCTTGTGCTGTGAAAATTACTATTCATTCACCATCCTTAATACAT TGTCACCTGGTTTAAATCTGTTGTTTTTGTTTCCTAACTTTTAACAAATCTGTAGATATTGTGTTCCCTTTAGTGCCTAA CGGTTGGTATAAATAAACTATCATATACTCTTGCTTTAACTTCACATACTGCCAATGTTAAATATTTATCTGTATACATC TGACTACATAGATGAATGTTAAGTGGTGTGCCAACCCAAACTATATTTTTAGTGCTGTATAATTTTTTTACTTTGGTACT ATATTTTCCTTTCTTAAATCATATTGTGGTTCATTGCTGAATGTGTGCAACACTACAACTTTCACAAGATGTAATTTCGT GCAAGTGCCAAGTATTAGAATTTAAGCTACATCGACATCACCACAAAACCTTAAGGCACTTAAGGACATGGCTGAGTGGA TCCTTTAACTTGTATACAATTGTACACTGTACACAATTGCTTATCTATACAATATGAGATTTCATTTTATTCGCACTTGT AACTCTAATGCCAAGTAGCCTGTTCAAAGTGTTCAATATCTGTTAAGATTTAGTTTATTATTAGTCTTATCTCATAGAGA TATAGTTAAGATTTGTTTATCTATTTTAGATTAGCATCTATTTAAATAGAGATAGGTTTAGATAGATTTCGTTTGTTTTA ATCTCTTTGTTAGTCTATATATATTGTAGTCTGGAAAAGTATTATGAATGAAATACACATAAATAATTTTCATCAAATTC AAGTTGGTATCAGAGCAAGTTTCGATCCTACCGCTGTGAGGGGGCTCCTCCCCCGTGAGCCCCCTCATGGTGACTTTCCA AATCTCTTGGATTTATTTTTCGTACATTGCTTCCGCTTGTTAGTTCTAGCCGTTTTCTTACGGCCTCGTTTCTTTCTGAT TATGGTCCCCTTTGTCTTGGAACCCTAGTAATGTTCAACCACTATCAAATCAACGTCCTTCCACGTGCTGCCTTCCCAGC CGTCGTTCGTGACGCTGCTTCCACAGAAAGGTTCGCCATGTTCTCTTGGTTCTTGCGTTCTTGTCAGCCACAGTCACGGT GATTTGGTCTGTTTCACCGCCGTTTTCGATTTTGCCTAGATTCAGAGTATTGATAGATGTTTTTGGAGCCCCTTGCTCTT TATCGTGTGATTTCAGGTTATCTCTTTTGTTACTTCTGCAAATAAAATTGAAGAAAAAGTTGGAGAAGGAAAATGTTCTA GTTATTCCCTTGATGAAGTTGCCGCAATGATATGCAGCACCATATCACTGTATGGAGTTAAGGTTACTAACGTTTTTCAA GATCTAGAAGAATCAAATTTCCTCCGGCCCTACATGAGTAAAGCCATTGAAGATATATTTAAAGCATGTGTGGCTTTGGA ATTGAAAGAAGCTGCGTCTCAGATTTCTGTTTCTGCACTCTGATTACTGCAATCAGAGATTATAAGGATTTATGTTCTTG GAGCCTCTTGCTCTTGTACGTTTGTTCGTCTTGCTTGGTGGTATTTTTCTGCTCTTATTTGAGCCTCTGGTTGTTGTCCT TGTTTGTTGGGTTGGAATGTGTGATTTCAGATGCTGAATTTTCGGTGTGGAAACCACAAAAAGATCCTTACATCTGTGGT GATTTCTCAAAATCAGTTTTTCATAATTCATGTGAAGTATTCACACAGAGTAAGCGGTGAAGGGCAATTTTAAGTCTCTA CAATTTCTGATTACCGCATTGCATTGTGTGCTCCGTTTGTGTGTGAATTTCTCTCTCCGGCAGCAGCGATTTCTCGAGTT AATTATATTTGTTACAAGCTATGCATATGATATATATGCTCTAGCTTGAGGGGAAGTGTTGTGTGAATTTCTCTCTCCGG CAGCAGCGGCTTCTCGAGTTAATACTATTTGTTACAAGCTATGCATATGATATATATGATCTAGCTTGAGGGGAAGTGTT AGATATTGTTAAATATCTTAGAGACTACAGTCAGCCACCGCCGCCGGATTCCAAGCCACGCGCCTCCCATCTCTCTGCGT GTGAAGTCCACGCGCTGCTATCTCCGCTGCTTTGTTTTCGCTGGTCCTCTTTGTGTATCAGCCAGGTTGCGCCGCTCTCT CCGCTGCTTTGTTCTTGCTGGTGCCGCTATCTCCACTGCTTTGTTTTCGCTGGTCCTCTTTGTGTATCAGCCAGGTTGCG CCGCTCTCTCCGCTGCTTTGTTCTCGCTGGTCCTCTTTGTGTATCAGCCAGGTTTGGTTTTAAGGATCCTCTGTTTTGAC GTGTGTTGTGCCAACTCTCATTGTTGGCCAAGTTTGGTTTGGTTTGGTTTGGTTTAGATTTTTAACTCTGTTTTGACGCT CAGGTTCCACATTGGTTTTTGAGACTTGAGTTGTTGTTTGCGTCTCATTGCTCGAGATGCTCTTATTATATTGATCTTGG CTGACTTTATGCAATTTGGTTTTGAAGGTGATAGTGTCACCTTCGTTTGTTTTGTCTCGATTGTTTGGTTTTCTGGTTTT AGGGCTTCAGCTGCGAGTTGCGCTGACCCACTCTCTAGTTGAGAGTTATTGGTGTTGGTTTCAGGGCTTCAGCTGCGAGT TGCGCTGGCCCATTCTCTAATGTTTGAGAGTTATCTGTGTCAAAGTTGACACCATTGTTTGTCTTAGAAGCCATCAATCG ATCGACCTCAAGTATGTTTTATTTCTGTGTGGTTGTTGTTGGTGAGTTGTTGCTTCAGCCTTGTTTTGTTTCGGGCGTAT TGTTGCTGGTTTTTCGCCCTTGTTTTCTGGCTCAGCTACCCTACGACACTCCAGAAGAATTGGTTTTTGTCTTGCATCAA TTTCAGCCAGATCAAGTATGAGAAGTTGTCTTTTGCCTGCCCATGGATTTAGCAGAAGTTCGAAAGGTTATTCAATTTCA AGTATAAGAAGTTGTCTTTTGCCGCCATGGATTTACTAGAAGTTTGAAAGGTTATTCAATTCAAAGATTCGCCAAGACCG TCATTATTAAGGGATATCTATTAAGATAATTTTCTTCTTGGGTTAGATTTGTTACAAGCTTCAAGCTAAGTAAGCTTTTG CTTGAGGGGGAGTGTTCAAAGTGTTCAATATCTGTTAAGATTTAGTTTATTATTAGTCTTATCTCATAGAGATATAGTTA AGATTTGTTTATCTATTTTAGATTAGCATCTATTTAAATAGAGATAGGTTTAGATAGATTTCGTTTGTTTTAATCTCTTT GTTAGTCTATATATATTGTAGTCTGGAAAAGTATTATGAATGAAATACACATAAATAATTTTCATCAAATTCAAGTAGCT CTGGTTTACTAGTTTAGTTTAGGGTTTCAGCCATCGTAGGCTAACCCTTATTTTTACCAGTTAGAATTCCGGAAGCAACC ACCGGCCGCCACCACTGCTGTTGGCTGCTGCTACCATAGTCCGCTGCTGCCACCACTGTGTCGTGATCAGCCGCCACCGC CAGCCGCTGCCGTCGCTGCCGGTCGCCGCTGACAATTTTTCTGGGTTTGCTTGTTTTTATTCCAGGATTCCTCTTCTGTG GTTCGTTTCTGTGTTTGAGGTCTCTTGTTTCTGTTTTTTGGCCTGTTCCAGTCAGTGAGCCTTTCGTTTGAAGTGTGTTT GGATTTGTTTGGTTGCGGTTGTTTTCCCTGTCTCTGTTTGTTCTTTTTCTTCATGGAGGATTTGCTGAAGGATAAGTCTC CCAAGGGTGAGAAGAAGAGTCTCATCTCATTTGCTTTTTCTGGGACTCCTGTTATCACTTCTGAGAAGTTGAATGAGGCA AATTATCTAGATTGGTCCAATGCTGTTGAGATCTGGTTTTTGGGTCAAGGTTTGTCCGAGCACCTTACTAAAAAGTGTGC TGATATTGATGCTTCTGAGAAGAAGGAATGGGAGAAGGCTGATTATCAACTTGTTTCTTTATTATACCAGGCAATTGAAC CTAGACTGATTGTTCACTTTCGTCCCTACAAAACATGTTATGATGTGTGGAAAAAGGCACAGGACATCTATGCTAATGAT ATTCAGCGGTTGTATGATTCAGTACGTAATTTGGCAAATCTCCAGATGACTGATCTTAATTTGCCGTCTTACCTGAATAA GGCACAATCTACCATTGTGGAGCTGAAGTCAATGCTGGTTAATGACGATTTGAAGAAGGTGCTGGAGAAACTTGACAATA TGTTCATGGTGTTTGTTTTGCATGGTCTCCATAAGGATCTGGAATCTGTTCGAAACCAGACCCTTACTAATCCCAATATT CCTACAGCGGAGATAGCAGCGCGTGGACTTCACACGCAGAGAGATGGGAGGCGCGTGGCTTGGAATCCGGCGGCGGTGGC TGACTGTAGTCTCTAAGATATTTAACAATATCTAACACTTCCCCTCAAGCTAGATCATATATATCATATGCATAGCTTGT AACAAATAGTATTAACTCGAGAAGCCGCTGCTGCCGGAGAGAGAAATTCACACAACATAGCCGAACCTACTTTTTTCTCT TTAGACTTGCTTTTCAGATTATGTATTGTCTAATCTTGGGGTCAGCCTGGCCCTAGTCCAGCCCAACCTTGACTTAGAGG TTAGCCAGTTCTATTAGGTTAAAGTTGGTTGGATGTTTGTTACAGTGAGGGGATTTGCAAGCAATAGGATGGACTTCTGT TGTTTCAAGGCTAAATTGATGGCTGTTCAAGTGCTGTGAACACTTGATTTGGGCTTTCATGTGTTTTAGGGAAAAGTGAA GAAAGAATCATTTGTATTCACTTTTTGCTGACAAACCCCCTTATTTTATAGTTTTGGTTGAGCCATGATCCTTTATTATT ATTATTGCAGAGGTTATAACATCAGCAGAATTCCACCCTACACATTGTAATATGTTGGCGTATAGCAGTTCAAAGGGTTC AATTCGTCTGGTTGACTTGCGCCAATCAGCTTTATGCGATTCTCATTCCAAACTGTAAGCACATCTTTTGTTTATGCTCT TTTGTGGGAATCGTATTGATACCTCCTATCAAATGAGTATGTCACTCCTCCCATAAGGCTTACAGTTTTTATCAAATTTT GAGATGGTAGGAAAGTTACAGGAAAGATGATTTATATTCTTGTTTGTGTGGACAATCAAAATGGGGCTAATGTAGAAAAG CATTTATGTACTGTCTTATACCTTACAGACTGTAACAGGCAATACCCTTTGGTGCAGATTTGA
CDS sequence (LotjaGi3g1v0023900.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGCTCACATGTTATAGCGATGGTGAAACTTTCATATCAGCCGATGATTTGCGAATAAATCTCTGGAACCTGGAAAT TAGCAATCAAAGTTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACAGAGGTTATAACATCAGCAGAAT TCCACCCTACACATTGTAATATGTTGGCGTATAGCAGTTCAAAGGGTTCAATTCGTCTGGTTGACTTGCGCCAATCAGCT TTATGCGATTCTCATTCCAAACTGCAATACCCTTTGGTGCAGATTTGA
Protein sequence (LotjaGi3g1v0023900.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLTCYSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLVDLRQSA LCDSHSKLQYPLVQI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 91 | 91 | 6.0E-9 | ||
| PANTHER | 6 | 88 | 83 | 2.0E-54 | – | |
| PANTHER | 6 | 88 | 83 | 2.0E-54 | ||
| SUPERFAMILY | 6 | 85 | 80 | 3.0E-9 | ||
| PRINTS | 24 | 51 | 28 | 7.5E-29 | ||
| PRINTS | 52 | 80 | 29 | 7.5E-29 | ||
| PRINTS | 81 | 95 | 15 | 7.5E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Protein phosphatase type 2A complex | A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Protein phosphatase regulator activity | Modulates the activity of a protein phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a protein substrate molecule. |
Expression pattern of LotjaGi3g1v0023900.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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