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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0024000 |
| Transcript ID | LotjaGi3g1v0024000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Inorganic pyrophosphatase 2; TAIR: AT1G17710.1 Pyridoxal phosphate phosphatase-related protein; Swiss-Prot: sp|Q9FZ62|PPSP2_ARATH Inorganic pyrophosphatase 2; TrEMBL-Plants: tr|A0A0L9TA82|A0A0L9TA82_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0024000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:2646340..2647777) extracted from Lotus japonicus Gifu genome v1.2.
GAGCATTTGGAAACACCTATTGCCATTAGGAATCTCATTCTTAGAAGAAGAAGATAATGGCTGGAATTGTGGTTGTTTTC GACTTCGACAAAACGATCATTGACTGTGATAGTGATAACTGGGTTGTTGATGAATTGGGTTTCACTGATTTGTTCAATAA CCTCCATTCCACCATGCCATGGAACACTCTCATGGTAACCTTTTAAAGATTTGCTTTAAACTTGTTTTGTTTTCTTCAGA TTAAGTCATGTACTCTTTTTTTAGTGCTCTGTTTTCTGATGATAGGCTCTTGGTTTTGGTTTTTATTTACAGAATAGGAT GATGATGGAACTTCATTCTCATGGGAAAACAATTGAAGACATTGAGCAAGTTTTGCAAAGGATTCCTATACACCCTAGAA TCATCCCTGCCATTAAAGCTGCTAGGAATATGGGGTACATACATGTCTTTTAATTCTCTTTTTTTCTCATTTGATTTTTA TAAAAGAGTTGGTGTATTCAAGATTTTAACACCAGGGCCAAAAGAAAATATGAAAAAAATTACAAAATATTTTGAGATTT TGGACTTAGAATAAAAAAAATTCTATATAAAAATACATATGATCAATAAAGAAATTGATTTTCTTAGGTTGTCATGGCCC TTTTAGATATGCCTCGGTCTTGTATTCTTTTCTTCTTGGAATCAAGAAACGCATGGTAACATTAATTTGTAATTTTCAGG TGTGATTTGAGGATCGTTAGCGATGCCAACACGTTCTTCATTGAGACAATTTTGAAACACTTAGGAATAAGGGAGTGCTT CTCAGAGATCAACACTAACCCAAGTTATGTTGATGATGAAGGAAGGTTGACAATTTTGCCTTACCATGTGCACGGATGCT GTAATCCTTGCCCTCCAAACATGTGCAAGGTATCTATCAATCATACATATTTTTTCCAAAGTGATTTTATAGAGTTTTTC TATCATATTATTTGGTCTCTAATTCAAATCTTAACCATTAATCACAGGGTCTAATCATAAAGAGAATCCAAGATACAATA TCACATGAGGAAAACAAGAGGTTCATCTATCTTGGTGATGGTGCTGGAGATTATTGCCCAAGTTTGAAGCTTAAAGACAA AGACTTTGTGATGCCAAGGAAGAATTTTCCTGTGTGGGACTTGATATGCAAAGACCCTTCATGTATTAAAGCTGAAATCC ATGAGTGGAGCGATGGAGAAGAGTTCGAACAAGTTTTGCTGCACCTAATCAACAAAATCTCCATGCATGACGACATTGCT CAATTCATGTCATCTAATTGCAAGCTTAAAGCAATATTCCCTCAAGTTCTTCCAGTTCAACAATAATTTCTCTGTTTAAT ATTCTTTGCAAAAGTTACAACGATTTTGTTTTCTTTTACAAATTAATTGATTTAATATATATTATTCAGTTTAACGAA
CDS sequence (LotjaGi3g1v0024000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGGAATTGTGGTTGTTTTCGACTTCGACAAAACGATCATTGACTGTGATAGTGATAACTGGGTTGTTGATGAATT GGGTTTCACTGATTTGTTCAATAACCTCCATTCCACCATGCCATGGAACACTCTCATGAATAGGATGATGATGGAACTTC ATTCTCATGGGAAAACAATTGAAGACATTGAGCAAGTTTTGCAAAGGATTCCTATACACCCTAGAATCATCCCTGCCATT AAAGCTGCTAGGAATATGGGGTGTGATTTGAGGATCGTTAGCGATGCCAACACGTTCTTCATTGAGACAATTTTGAAACA CTTAGGAATAAGGGAGTGCTTCTCAGAGATCAACACTAACCCAAGTTATGTTGATGATGAAGGAAGGTTGACAATTTTGC CTTACCATGTGCACGGATGCTGTAATCCTTGCCCTCCAAACATGTGCAAGGGTCTAATCATAAAGAGAATCCAAGATACA ATATCACATGAGGAAAACAAGAGGTTCATCTATCTTGGTGATGGTGCTGGAGATTATTGCCCAAGTTTGAAGCTTAAAGA CAAAGACTTTGTGATGCCAAGGAAGAATTTTCCTGTGTGGGACTTGATATGCAAAGACCCTTCATGTATTAAAGCTGAAA TCCATGAGTGGAGCGATGGAGAAGAGTTCGAACAAGTTTTGCTGCACCTAATCAACAAAATCTCCATGCATGACGACATT GCTCAATTCATGTCATCTAATTGCAAGCTTAAAGCAATATTCCCTCAAGTTCTTCCAGTTCAACAATAA
Protein sequence (LotjaGi3g1v0024000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGIVVVFDFDKTIIDCDSDNWVVDELGFTDLFNNLHSTMPWNTLMNRMMMELHSHGKTIEDIEQVLQRIPIHPRIIPAI KAARNMGCDLRIVSDANTFFIETILKHLGIRECFSEINTNPSYVDDEGRLTILPYHVHGCCNPCPPNMCKGLIIKRIQDT ISHEENKRFIYLGDGAGDYCPSLKLKDKDFVMPRKNFPVWDLICKDPSCIKAEIHEWSDGEEFEQVLLHLINKISMHDDI AQFMSSNCKLKAIFPQVLPVQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 253 | 253 | 3.7E-147 | – | |
| PANTHER | 1 | 253 | 253 | 3.7E-147 | ||
| PIRSF | 1 | 235 | 235 | 7.2E-96 | ||
| Gene3D | 2 | 188 | 187 | 4.8E-26 | ||
| TIGRFAM | 4 | 195 | 192 | 5.9E-60 | ||
| Pfam | 4 | 231 | 228 | 1.1E-98 | ||
| TIGRFAM | 5 | 183 | 179 | 9.5E-33 | – | |
| SUPERFAMILY | 5 | 201 | 197 | 1.14E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphatase activity | Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate. |
Expression pattern of LotjaGi3g1v0024000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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