Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0026200 |
| Transcript ID | LotjaGi3g1v0026200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein, putative; TAIR: AT1G17630.1 Pentatricopeptide repeat (PPR-like) superfamily protein; Swiss-Prot: sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containing protein At1g17630; TrEMBL-Plants: tr|A0A151SUC1|A0A151SUC1_CAJCA Putative pentatricopeptide repeat-containing protein family; Found in the gene: LotjaGi3g1v0026200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:2853310..2866268) extracted from Lotus japonicus Gifu genome v1.2.
ACCAATTCAAACTGCGAACACCCCTAGATGAGGTAATAACAGCTTCCACTCTCCAAATAGTGTTATTTCTTGTTCTAATC TCAATAGAACCTCAGTCCTCAACCCTCAAGCTTCATGCTCAATGCAGCCCCTGTGCGCTTCCTCTGTTCTTCCTCTCTAC GTTTCCGACCCCATTTTCTCACTCGTTCATTCTCCCTCTCCACCGCAACCCACTCCCCCACCGCACCACCACACCCCACC ACCGAAGATTTCTTCATCACCCTTCTTCAACAATGCTCCACTCTCCAACAAGCTCGCCAACTCCACTCCCAAACCATCCT CACCGCCGCGTATCGCAAACCCTTCTTAGCAGCCAAGCTCATAGCTCTCTATGCGCGCTTTGGGTCTGTCTCTCATGCTC AGAAAGTCTTCAATGCTGTCCCATTTGAGCGTCTTGATCACATTCCTCTGTGGAATTCGATTATCAGAGCTAATGTCTCT CATGGGTACTTCGAATTTGCTATTGAAATTTATGTTGGAATGCGAAAATTTGGATTTTTCCCTGATGGGTTCACTCTCCC GTTGATAATTGAGGCTTGTTCGCATCTGGGTAGCTCTAGTCTCTGCAGGATTGTTCATTGTCATGCTTTGGAACTGGGTT TTCGGAATCATCTCCATGTGGTGAATAAATTGGTGGGGATGTATGGGAAGCTTGGGCGAATGGAGGATGCCTGCCAGTTG TTTGATGGAATGCCTGTGAGAACTATTTTGTCGTGGAATACTATGGTTTCGGGTTATGCGTTCAACCATGATTGTGTTGG TGCTTCTAGGATTTTTAAGCGGATGGAGTTGGAAGATTTGCGGCCGAATTCGGTAACGTGGACCTCGCTGTTGTCGAGCC ATAAGAGATGTGGGCTTTATGATGAAACTCTTGAGTTGTTTAAGTTGATGAGGACTAGGGGATGTGAAATCAGTGCTGAA GCGCTAGCTGTGGTGATATCTGTGTGTGCTGATGTGGTTGAAGTTGACCGGAGCAGAGAAATCCATGGTTATGTTATTAA AGGTGGATATGAAGATTATTTGTTTGTGAAAAATGCACTGATAGACACTTACAGAAAGCATAAACATTTGGGGGATGCAC ATAATGTATTTTTTGACATAAAGAACAAGAACCTAGAAAGTTGGAATGCTTTGATATCGTCATATGCTGAATCCGGATTA TGTGAAGAGGCTCATGCAGTACTCTTGCAGCTGGAGAAATCACTTGATGGTCATCAGCCACTAAGGCCCAATGTCATAAG TTGGAGTGCTGTGATTAGTGGTTTTGCTTCTAAGGGGTGTGGTGAGGAGTCACTGGAACTTTTCAGGAGAATGCAGCTTG CCAAAGTAAAGCCCAACTGTGTGACATTTTCCACTGTTTTGTCAGTTTGTGCTGAATTAGCAGCACTAAACCTTGGCAGG GAGCTCCATGGTTATGCCGTTAGGAATCTAATGGATGACAATATTTTGGTCGGAAATGGTCTGATTAACATGTACATGAA GTGTGGGGATTTCAAGAAAGGACATTTAGTGTTTGATAACATTGAGGGTAGAGATCTAATCTCATGGAACTCTTTAATAA GCGGTTATGGAATGCATGGGCTTGGTGACAATGCTTTAACTACTTTTGATGAGATGATTAAGGCGGGAATGAAGCCGGAC CACGTCACATTTGTTACTGCTCTATCTGCTTGCAGTCATGCTGGACTTGTGGCTGCAGGTCGCAACCTTTTTTATCAGAT GGTTAGAGAGTTTAGAATTGAGCCTACTGTAGAGCACTATGCATGCTTGGTTGATCTCCTTGGTCGTGCTGGACTTTTGC AGGAAGCAAATGATATTGTGCGAAACATGCCAATTGAACCTAATGAGTATATTTGGGGAGCTCTGCTAAACTCATGTAGA ACGCACAAAGATACAAAAATTGTAGAAGAAACAGCATCACAAATTTTGACCCTGAACTCACAAATAACTGGGAGCTTCAT GCTGCTGTCCAATATATACGCAGCAAATGGAAGATGGGAGGATTCCGCCAGGGTTAGGATCTCGGCAAAGAAAAAGGGTT TGAAAAAAACACCTGGTCAGAGTTGGATAGAGGTCAGAAAGAAAGTTTATACATTCTCAGCAGGGAACATAGTCCATTTA GGACTGGATGAAGTTTATGTGATCCTTGAGGAATTGGCACTTCAAATGGCGAATGAAAATTATGAACTCAATAGTTGCTT TAATCAAGAATGTATTTACGACCAATCAGAGCTCGTACTTGTTGCAAACTGAAAGGTTAGATATTATCACTTCTACTTTT AGCATTTTTAGTAACACTTCTTAACTCACAATGTTGTAAATGTTGCTCATAGATTGGTTCGAGAAAAGTGGGTCTCAAAA TTGTGCACTGTCCTGATTTTCGAATATGCCCTGCGCTCTCCAGGGTCAACCACTGATTCCTCTGACCATCCCCCTCACTG TCGATTTTATAACTCTTGACATTCAAAGTCCTTCTCCAATTACTACATGACGTGACTTTGCGTAATGTGGTTGTGTTTTA AACACAAGGTAGTCAATAGCTTCTTAAGTTATCATGTTTTTTGTTGTGATACATATTTCTATTTCTATGTATTGGTAGGA TTCAAGAACTTGATTTAATATTACCTGCTAACTTTCTTTCTTGTTTCATTTTAGATATCCAAGGGCTGCTGGAGAATTAT GGCCTCGAGAGGGTTCTTGATACTCTGGTCATTGAGGTTAGACCTAGTAGTTATTATACTCCAGTCTTTAAATGTATATA TATTCACATTTAATGCAAGTTTACTTTCAACTGCTACAATTATGTTTTTGTTTTAAAAATTTGTTTTAATTACTGTAACA TTACACGATCATATTGCTATAAGGTTGTTGAAGTTCTCTAGTCACGTTGATAAGTTTCTGAGCTGTTTAGATAATCGAAT TGTTGATTAAATTATAGACTTATAAATGGAACGAGTTCGATTTATCACTAATGTGGTACAAATTCTTCTCCATATATCTT AACCACAGTTCATGTGTGCAAGCTGTTCTTCATGCATATTTATTTATTGCTTTGGTTTAAGAACTATAAGCTTAAAGCTC TTGAGGTTAAAATTTTATCCAAGTTCTTATTTAGGATGTATCTTAACCATTTAAAACGTGAACTTTGAATATGCCCTGCA GTTCACTGTTGATTACCTGACAAAGCTTCTAGATATTTTCAAGAAGGTCTGCTGGATGCTCAAATCAGGTGGACTGGCTA TAATGAGGTCATAATCTTCTCATCTATAGCAGTTTTATAAAATCTAATAATGGAAAGAAAATTTGTTATGAAGCACTTTA CAATAAAATCACCATTCTCTTGGATATATATTCATATTCATCAGCATACAATTGGTGAAAGATAAGGTTGCCAAAGTGAA GGGTGTTTATAATGAAAAAATGATACAAATTCGGAAGGAAATAGTAGATTTTGTTGTGTACTAAAAGATTACAGCATTCT TAACTTCACTAAAAAATTAGGCTTAAATATGTTTTTAGTCATTACATTTGTGAGTATTTTAATCCCTCCCATTTTTGTAT GGTTTATGTCCCTTATATTTTTAGTCCCTCTATTTATGCGAGGACCAATCGTTTGCCCCATTTTATATCAATGTTGGTTG GCTATTCCCTTTGCCCAATTTTAAGAATATCCCACCCTGATTTGTTTTTCAGTGGCCTGTGAACTCTTTTGCTGGCACCG ATCGTTTGCTTTGCTTTCGTGGGATGAAGCTGGTGTCTATGTATGGGAAAGAAGAAAGTTGTTTTCAATGATGTGCTGAT CCCACCAGATAGAGTGGTAGAGGAAGCTCAACGAAACGGGTTGCCCAAGGCTTTGCCATAGCTGTCCCCCCTTTACTATC TTCCACAGGGGTCACTTGACAAGGGGATGAGGCTGGAGAGGAAGGGTGGAAACCACCGGCTCAAGGCTCAATCAATGTAA ACTTTGGCGCCTCCTTTAAGGCGGGAGTAGGAGCAGGGTTTGGGTTGATAGCACGCAATGGGTCGGGCCAAGTTTTGGCT ATTGCGACAAATCTCATAGTCGATGTCTCCTCTCCTGTGGTGGCTCAGGCATATGCTGCTTTCGGTGGGCTATTGAACTA ACAATGGATTTAGGCTTTAGCGGAGTAATCTTCGAGAACGATTGCTAGGTGCTTCATTGTGCGTGGATTTCAAAGCTGAA TAGCCCTCCGTACCTCTCCTTCATTGTGCAAGACTATTGGTTCTTGTCTTTCGGTTTTAACTCTTGTAGTTTTGTTTATG TTAAGCGTCAATGTAACGCGGTGGCGACTCTTGTAGATTTGTTGCCTTACCTGACCACAGATGTACCTACTTTTTACTAG ATGACAAGCTAATAATGCTAGCTTATCAACTTCTTTTTTATCTCTCCTTTTTCATATCACCTTAACATCATTTCTCTCAT TTTTTTTCTGAGTGGTGTGAATTTTTTTTGTCTTAACTAACTTATCCTCACATATCTCTATCGCCCACGGTCAGCATGAG AGAAATTTTGGTATGAATGAAGTTTTATTGGTATTAAAGGGTGAATTTCCTTTTTTTCATTTTAAGGTGACAGTACTAGA GATGTTGGTGATAACCATACAACATTCTTGTGATTCACATGCATGGTTTCACAGCCACCGAGAAATATCACCGTTGTGTG ACTACGACATACACTTTTCTTTCTCTCAAACCATCACAAGAAAACCGCTTAAACCTTCCTACACTTTCTTCAACTTCTCC ATTAATTCCTCCATCCATAATCACCATGCTTCTTCTTCATAAGCTTCCAAATATCTTCACTTCTTTATTCAACTTCCCAC AATATGGCAACAACCAATGGAGAATTAGCATCACCAAGGGTCCAATACCCACTTGACTCTTCCTCCTACAAGCTCCTTGA TGAGATAGGTGCTGGCACCAGCGCCATTGTCTACAAGGCCATCTGCCTCCCCATGAACTCTGCACCGGTCGCGATCAAGT CGATTGATCTCGACCGGTCGCGCCTGAACTTTGATGACGTTCGTCGCGAAGCCAAGGCGCTGTCTCTGCTCTCTCACCCT AACGTCCTGAGAGCTCATTGCTCATTTGCCGTAGACCGCCGTCTCTGGGTGGTGATGCCATTCATGGCTGGAGGGTCCTT GCAGTCCATCATCTCTCACTCGTTCCCGGATGGCTTGGCGGAACCGTGCATTGCGGTGGTTCTCAAAGAGACCCTCAACG CTCTCTCTTACCTTCATGGCCAGGGCCACCTTCACAGAGACATCAAAGCTGGTAATTCTTTTATTTTATTTTATTCTAAA ACTGGAATTCAGAACTATATAATTAGAAGTTATTATGTGAACGTAATTATGATTATATTTCAACTTATAGAAAAAAAAAC TAAGATACATATATGCTTTTCTTGATCGATTAAAATGATGTCACTGGTCGTAAGGTTAGTTATTTATATTCATTGAACTT AAAAAAAAATGTTCACTTTGTTGGTGTAGTCAGCAAATAGTTTGAATTTGTATAATTCAATTTTGTATTTTAAGATTTAA TTCTGCCTAGTGTAACCAACAAGTTTTTAGTACAACTGACTTGAGGGTTCCGAGAATCGAGAGGATTAGTCTCATAACTA TTAGATTGGATGTGGGGATACCTTGACAATACTAAAAAAAAACATTGCTTTTGTAAAGATAGAGTATTAAAAATGCATTA CTACTCATCTTAGAGTACTAAATTTTTTGCTACATATCACGAATAAGCTTAAGAGTAATGATACATAAAACCTATAGAAA ACTCCAAAGATCCAATAGACATACATGTTAGTGGAGATTACAAACCCGCTAACATTTTCAAAATTGAGGGACTAAGCTAA GAAAAGGAAAATGTGTCCTTCACAACTATTCCATCTCCACCATTTAGAGAGATAGGAAAAGAAGAGAAATAAATGCAATA TATGATTTGGGATGTGATTGGAACAAAAGAGATATGAAAAAAATTGAGTATAAATGAGATGCATGAGAAGTTGAGCCTGA ATATGGAAGTTGCTAAAAGAAATGAAAGTGAACCAAAATTACACATAAACAAAAACTATAGTAGTGAGACCAGAAGTGCC TGTCATATGTTGATCTTTCTTTGATCAATTGTGTTAAAACAATTGAAAAATGGATTGAATTACACTTATTTTCAACTTGA ATTGTTGTTAATAATATCATTGATCTACCTTGAATGTGGCAATACCATGAACCAAGTCAGACAACTCCATTATCAGTCCA TTTCTTATTTCCAATCTACTTTCCTTTGATCAGGTAACATCCTGGTAGACTCAAACGGATCAGTGAAGCTAGCAGATTTT GGTGTCTCAGCCTCCATTTACGAATCCATGAGTGGCTGCGGACCCAGTTCATCATCTTCTTCATCTCTCATGTTAACCGA TCTCGCCGGAACACCATATTGGATGGCCCCTGAGGTCATTCACTCCCACAAAGGCTACAGTTTCAAAGCAGACATCTGGT CATTCGGCATAACAGCTCTTGAGCTTGCACATGGAAGACCACCACTCTCTCACCTTCCACCTTCCAAGTCCATGATGCTC AAAATCACCAAAAGGTTCAAGTTTTCTGATCTTGACAAGCACAGAAAGGAAAGTGGTAAAAACAAGTTTTCAAAGGCTTT CAGAGACATGGTTGCTTCTTGTCTTGATCAGGATCCTTCTAAGAGACCAACTGCAGAGAAATTGCTGAAGCATGCGTTCT TCAAGAACTGTAAGACTCCAGAGTTTCTCGTGAAGAATGTGTTGCAGGGGTTGCCGAGTGTTGAGAAGAGGTATAGAGAG AGTAAGGCTATGAATGATGATGATGATGAAGAGAATGAAGCAGAGATGAAACAGAGTGCGAAACAGAGGAGGATCAGTGG TTGGAACTTCAATGAAGTTGGATTGGAGTTGGAGCCAGTTTTCCCCAATTGTGATTATTTGAATTCCCCTAAGGATGATC CATCTAAACAAGTTCAATTTGAAGTTGAGCCCGTGATCCAAGACATGGGTGGAAAATTAGAAGAGCATGCTGAAAACCCA ACTGATCCTGGTGAGGTTGAAGTGGAAAAGACTACATTGGTGGAAAAAGTAGTTGGTGGTGTTGAGGTTGTGAACAATGG TGAATCCATGTTGGCTACTTTGAATGTGTTGAAAGGGAGCTTGGAACAGGAGCTGGGACAGGTCAAGTTTCTGATGAATC TGATAAGAGAAGGTGGAGAGGAGATTCAAGATGGTGATGGTGAGGGGAAAGAGATTTCTAGGCTGAGGAATGAGTTGGAA AATGAGAGGAAGAAGAACTTGGAGTTGGAGTTGCAGCTAGAGGATTTCAAGCTTCAGCTTTCTTCTGCTTAATTCTAAAA TCTAATTATTGAAGGTCTCAAAACAGTTAACATCTAATTAAACCAGAACATGTGATTCTGTGTATAAGACTATGTCTCTG AACCTGACAAGTTGTATTTGTATAAATAATTGCTTAGGTTGTAGCTTTTGAGTACTTACTACTTGCTTTAGCAATGCCTC CTTATGAGTGATTGATGAACTCTTATAATTGAAAAATACATAATTGCTTAGTGTAATAATTGTCAATATGATGACATATG ATAATGAGCACGTTTTGAATTTTACATTTTATTAATTAGCATGGAGAGTTCAACACAATACTCAGAGATACTAGAGAGGG CAGGAGAAAGTTCCCCACATATATATATAGTTATATACAACTCATTATATATATTCACAGTCAATTTTTTTCATCACTCA TTTCACCTCCCCTTTAGAGAAAGATGAGAGTGTGAGATATAGGAAAATAAAATTGCTGATAGGAAGAGAAAGTTATGGTA AACAAATCTGTGCTTTTACTCTGAGAGCAGGGGATAGAACATCAGTACAAAATGTTGAGGTAATGCTTATATAAACAAAC AACTCTTAGGAGTACAAAAAGAAAACCGTGTCACTAAAGTTGGACACAATGTGGAGGAAGTACTCTTAAGAGTTCCTGTA AAAACGAGCATATAATTTCTACAATCTCTAACACCCTAGCTAGTTTGATTTGTAGGAACAAATGAACAAAATTGTTTCAC CTTTCTGATCAGGGTTGAGTTTGTTGAATGCAATCAGCAAAACCTTCTACCTTGTCAATCTTAAATAAAACCACTTCATC ATCACTGCATAGTTGAGTAAAATAATACATCATGTTAGAAACTGTCATGAATTGATTGAAACAGAACAGAATATATAAAT AGCAATAAACCATCATTATCTGCATTTTTCATACTCTCCAAAACAACCCTCTCAAGTAAGAATTCATCAATGAAGCATCC AAGCATATATTATCAAATAGACTAGAACTCATTGATCACAACTTCCTAATTTAGCCAATAGTACACAATAAAGCTAAGAA TGAGTCCCTTCTAATTATAAATTTCAAAAATTCAAACTCAACACAACATGCAATATTTGGTACTAATTCTATGTTTGAAT ATGAGTTGAATTAACGCAAAAGCATTTATTCCAACCCATCAAAGAAGTTTCGTTCATTTTTTTTGTCTCAAAATGAGTGC TAATGCTAATTAGCACCAACACTAACATGCATTCAATTGAACTCACTACATTCAATGCACCCATCCCATACATTCAATGC AGCCGCCACACATCCAAAAAACAACTAAGTTTAACAGAAATTCTGAAGAAGAAAAATAGTACTATTTTCCAGCTTCAAAT TGCAAATTTCATTCCAAAAATCATGGTTTTCAATAAGGTCCCAACAAAAACTCTATAAAAAAAGTAATGCAAGAACTCAA ATACAAACCTGCACCACACCAAGGTTATTTCATTTTTTTATTCAGTTCAAGAACATTCTTCTGATCATCATTCTCGTCTC CTTCTTGTTCTTTGTTATCATCCTGAAACATCAATGGTATCTCATCTTGAAAACCAGGGTGATTTTGTTGTGGCTGTGGC ATCATTTCTTGAATGAATGGCCTTCTGTAATATTCGAGCAGTGTTCGAAACTCATTCAGCTCGTTCTGGCGCTGCGCAAT CTCAGAATCCAGGTGCTGTATGTATCTGTAACAGCCCCCAACAAGGTCCCTGGCTCGAACATCAGACTGGTACCGAATTG CGGTCATGGCGTCGTCTCGGGTTCGGGGGTCCATATTCTTGATGATGCTGATCATTTTGCTGACGGTGAAGAGTCGAAGC GCGTTGGCGAACTGTCCCCGGCGGCTTTGAGGGAAATACGGTGCTAGAATACAATCGGCGGTGCATTTTTTGCGCAAGTA ACTGCAAGCAGCGCAAGCGTTTTTGTTGTAGGCGCCGCTGGCAGTTCTTATAATAGTGGCGGTGTTGTCGTTGTTGGCGG CGATGCTGGGAGTTCTTGAAGTAGTGGCGGCGGTGTTGTCATTGTTGGCGATGGTGCTGGCAATTCTTGAATTAGTGGCG GTGTTGTCAATGTTGGTGGCGGTGTTGTCGTTGTTGGCGGCGGGGCTGACAGTTCTTGAAGGGGAGGTGTTGTCGTTGTC GTTTTCCATTTGTGGCACTTGTCTTACATTTTTTCATTGGTTGGTTGGTGCGTGAGAGAGGCACCGTTTGCGGCGGCTAT GGCGGCTAGAAACCTGCTGCAAATTTGGAAGGGATGTAATTGCTGATTTTTCTGGCGGTTCTCTCTCTTTTCCTTCTTTG TTGGAGAGTGTAGTAAACTAGTAATAAATTTGGGGAGAAAATATAGAGCAGAGGAACAAAAGGATAGCAGAGATCTTAAT GGGTTCTGTTTGAGAGAGGTGAAATGGATTTTTTTTTAAGCTAACTAGTGATTTATGAAAGATTAGATAATTATTAAGTT GAAAAGTAGCTTTTAAACTCCCGTCAAAAAAAAAAGTAGCTTGCTAACTTACTAATAAATAAATAAAACTTACTATTAAA TTAAATTAATTTTTTTTACAGTAAATTAAATGAAACTTACTATTGAATTCTATTTAAAAAAAAAACTATTGAATGTAAAA ACTAACTTACTATTAAGATTTAATATATCTACTAAAAAAAAACTAACGAGATTTAAGATATCTACTAAAAAAAACTATTG ATTTAGGATTTCGCCGGATCTTACTGGAAACTGATTGTCTACAACTTTTCAAGGCTTGAAAAGCGAAGGAGGCCGGCAGA TCATATCTTAGTTCTATTATTTCAGATTGTCGTTTATTAGTTTCTGCTTTTGATTATGTTAGTCTTAGTTTTGTTAGACG CACGAGTAACACTGTTGCGGACTTTTTGGCTAGGAACGCTGCAACCTATGCTGGTTTTGTATGGGTTGAAGAGGTTCCTG ATGCCGCTCTTCCTTTCATTATTTCTGATGTAACTCTTCTGGAGCCAATTGACATTTAATAGAATTGCAGTTTACTTTCA AAAAAAAAAAAGATAGTGCTCACTCGGGTGGACAATTTTTTTTGTCCACCGGTGTTCTAGGTTTAAACACCATTGAATTC AAGTATTTTAGAATATATTTTAATTGAATGGTTAAGATTAAGTGAATAATAAAAGGGTACAAATGTAAATTAATAACCCC TGGTCCCTCTTCTTCTCTATCTTCTAGATAAGGTTGGTGGCTTCCAACCTACACTTCTCTCTCTCTCTCTCTCAGCCGCC GCCGCTACACTTCTCTCTCTCTGTGTCGCTGTTGATGATGCTATTAGTTTCCCTCCCACGATGTTCTTTGATGCCTTTGT TCCTGGTCCTATTCCCTCCGTGAGGCAAGGCGGAGCACAGAGTGGCTCCAATTCGTCATCTGTTGATATAACCCTTGGTC CATCAATGGACAAATAACAAATGTGTCCCCCTAGTGGGCACCTTAAGATAGCTCACTTATGATAAGTTTGCTTGAAATTT AAAAGGCCAAAAGAATGGCATGGGTGGAGGGGTTAATTAATTACTCTATCTCTCAAAAAAAAAAGTTTCATAGTAACTGT CACTTAAAATTTTAAGAGAGTGTTATAAGGCCCATATAAGAAAAATAATAGGAGGAATAAAAATATATTTTAAAGGGAAA GTACATATATTAAAATTTTAACAATATTATTTGTATTTCTTAATATATGTATTTCTTCTTTTTCTTAACAGTTATTTTAA AACAAAAGAAGTACATGAGTCAAACAATAAATATTTGAATAACCTATTAATCTCTTTTTTTTAATTTGAGATGCATTATC ATGACTCTTTCACTTTTAGCTTTAAAAAAATTTGTCTAAAGGTTTATTTTTAGGATTTAATGTGTAAAGAATGGGTACAC ATGCACTAAATCATATCTCTCCAAATTGCTTATAATTACTTTTAAATTCAAATTTAAATATCACATGATAACTTGATGGA TTTTAATTTGAGAAAAAGAATGATGCACCGACGGTGTAAATTTTTTTTACACCGATGCTTCTGCTATTGCAGCCGCAGGG ATTGAGCTTCCGTCCGTGGTTGGTTGCTCAGATTCATCACTCGAATCATGTGCTGTCCTGTGCGATACAGTGGGGAGGTG GCTTTCAGGTTTTGCAAGCTCATATGGGTCCGGGGATGCTTTTCTGGCAGAGTTATGCGCGTTGAGGGAAGGACTTGAAC ATGCTTGGGATTTGGGATTCCGCAAGGTTCGCTGCTTCTTTGGCTGTTCAGAATTGGTTGTTGTTGTTGTGAATGGTGAT CAGGATGGGAGATTACTGTGAGTCACATACCGCGCGAAAGGAACATGGTAGCGGACGAGTTAGCAAAGTATGCAACCCGG GTTGGGTATAGAAGACAGATTTGGAGGAACCCACCCTCTAACATCGTGCCTCTTCTATGCCAAGATGTGCTTGTTTAGTT TTTTTGTCTGTTTTTAATTTTCCTATGTAAAAAAATAAAACTAACTTACTAGTTACTATATCTACTGAGTTCAAATGATT TTTTACTATATATACCAAAAAAAAATATTGAGATTTAAGATTGCTCACAGCTGATAAGTTGGCTTGAAGTTTAAAAGGCC AAAAAATGGTTTTTTTTTTGTTAACATTTCTTTTGGTTACAGCCAAAAAATGGTATGGGTTGAGGGGTTAATTAATTACT CTATCTCTATTTAAATAATTGTTTAATTTGAAAAAATTAATTCATAATAACTCTCTGCTTAAAGTTTTAAGAAAATATTA ATTGATATTTTTCCATAAAATACTCATATGAGAAGAATAAGTGAGGATGAATAAAAATACATTTCAATGGGCAAGGTAGG AAAATAAATCCTATTTTAAAATTTTAACAATATTATTTGCATGTCTTAATATATGTATTTCTTCTTTTTTCTTAACAACT ATTTTTTTATAGGAAAATGTTAGTTCTTAGTAATGTTAGTAAATTAATCCTCTTCAGAGTTCGAACTTGGACCATTCACC CTCCCAAACCCTTGTGTCCCCTAGCTCTTACTACTTGAACTCTTAAGAGTTATTTAAAACGAAAGGAGTATTTGAGTTAA ACAAGATTAAAAGATATTTAAAATACATTATCATGACTCTTTCGCTTTTAGATTTTTAAAAAATTTGTAACCAGATGAGG GGTGGTGTGTGCTATGAATGACAGATATAGAGACAACAGCTCACTTGTTTCTTCATTGCAAGGCTATTTGGATCGTATAG TGTGGGATATGGTTCCTTATGCATTGGTTTGGACGGTATGGATGGAACGGAATGGTGTGGTTTTCAACAATAAAGAGTTT TGCATGGTGGCGGGAGTGCCCTTATAGCGTAGCTCAGTTTGTCATGTGTTAAGGGAGTGTAACGAGGTAGTGGATTTCTT GGCTAAGAGTGGGAGAGAAGGGCTGGTATCTTATAATTTGATCAGGTAACATCCTGGTAGACTCAAACGGATCAGTGAA
CDS sequence (LotjaGi3g1v0026200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCAATGCAGCCCCTGTGCGCTTCCTCTGTTCTTCCTCTCTACGTTTCCGACCCCATTTTCTCACTCGTTCATTCTC CCTCTCCACCGCAACCCACTCCCCCACCGCACCACCACACCCCACCACCGAAGATTTCTTCATCACCCTTCTTCAACAAT GCTCCACTCTCCAACAAGCTCGCCAACTCCACTCCCAAACCATCCTCACCGCCGCGTATCGCAAACCCTTCTTAGCAGCC AAGCTCATAGCTCTCTATGCGCGCTTTGGGTCTGTCTCTCATGCTCAGAAAGTCTTCAATGCTGTCCCATTTGAGCGTCT TGATCACATTCCTCTGTGGAATTCGATTATCAGAGCTAATGTCTCTCATGGGTACTTCGAATTTGCTATTGAAATTTATG TTGGAATGCGAAAATTTGGATTTTTCCCTGATGGGTTCACTCTCCCGTTGATAATTGAGGCTTGTTCGCATCTGGGTAGC TCTAGTCTCTGCAGGATTGTTCATTGTCATGCTTTGGAACTGGGTTTTCGGAATCATCTCCATGTGGTGAATAAATTGGT GGGGATGTATGGGAAGCTTGGGCGAATGGAGGATGCCTGCCAGTTGTTTGATGGAATGCCTGTGAGAACTATTTTGTCGT GGAATACTATGGTTTCGGGTTATGCGTTCAACCATGATTGTGTTGGTGCTTCTAGGATTTTTAAGCGGATGGAGTTGGAA GATTTGCGGCCGAATTCGGTAACGTGGACCTCGCTGTTGTCGAGCCATAAGAGATGTGGGCTTTATGATGAAACTCTTGA GTTGTTTAAGTTGATGAGGACTAGGGGATGTGAAATCAGTGCTGAAGCGCTAGCTGTGGTGATATCTGTGTGTGCTGATG TGGTTGAAGTTGACCGGAGCAGAGAAATCCATGGTTATGTTATTAAAGGTGGATATGAAGATTATTTGTTTGTGAAAAAT GCACTGATAGACACTTACAGAAAGCATAAACATTTGGGGGATGCACATAATGTATTTTTTGACATAAAGAACAAGAACCT AGAAAGTTGGAATGCTTTGATATCGTCATATGCTGAATCCGGATTATGTGAAGAGGCTCATGCAGTACTCTTGCAGCTGG AGAAATCACTTGATGGTCATCAGCCACTAAGGCCCAATGTCATAAGTTGGAGTGCTGTGATTAGTGGTTTTGCTTCTAAG GGGTGTGGTGAGGAGTCACTGGAACTTTTCAGGAGAATGCAGCTTGCCAAAGTAAAGCCCAACTGTGTGACATTTTCCAC TGTTTTGTCAGTTTGTGCTGAATTAGCAGCACTAAACCTTGGCAGGGAGCTCCATGGTTATGCCGTTAGGAATCTAATGG ATGACAATATTTTGGTCGGAAATGGTCTGATTAACATGTACATGAAGTGTGGGGATTTCAAGAAAGGACATTTAGTGTTT GATAACATTGAGGGTAGAGATCTAATCTCATGGAACTCTTTAATAAGCGGTTATGGAATGCATGGGCTTGGTGACAATGC TTTAACTACTTTTGATGAGATGATTAAGGCGGGAATGAAGCCGGACCACGTCACATTTGTTACTGCTCTATCTGCTTGCA GTCATGCTGGACTTGTGGCTGCAGGTCGCAACCTTTTTTATCAGATGGTTAGAGAGTTTAGAATTGAGCCTACTGTAGAG CACTATGCATGCTTGGTTGATCTCCTTGGTCGTGCTGGACTTTTGCAGGAAGCAAATGATATTGTGCGAAACATGCCAAT TGAACCTAATGAGTATATTTGGGGAGCTCTGCTAAACTCATGTAGAACGCACAAAGATACAAAAATTGTAGAAGAAACAG CATCACAAATTTTGACCCTGAACTCACAAATAACTGGGAGCTTCATGCTGCTGTCCAATATATACGCAGCAAATGGAAGA TGGGAGGATTCCGCCAGGGTTAGGATCTCGGCAAAGAAAAAGGGTTTGAAAAAAACACCTGGTCAGAGTTGGATAGAGGT CAGAAAGAAAGTTTATACATTCTCAGCAGGGAACATAGTCCATTTAGGACTGGATGAAGTTTATGTGATCCTTGAGGAAT TGGCACTTCAAATGGCGAATGAAAATTATGAACTCAATAGTTGCTTTAATCAAGAATGTATTTACGACCAATCAGAGCTC GTACTTGTTGCAAACTGA
Protein sequence (LotjaGi3g1v0026200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLNAAPVRFLCSSSLRFRPHFLTRSFSLSTATHSPTAPPHPTTEDFFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAA KLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELE DLRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKN ALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASK GCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVF DNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVE HYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGR WEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENYELNSCFNQECIYDQSEL VLVAN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 33 | 33 | - | – | |
| Gene3D | 30 | 172 | 143 | 6.4E-11 | ||
| PANTHER | 30 | 160 | 131 | 9.6E-127 | – | |
| ProSiteProfiles | 109 | 143 | 35 | 9.021 | ||
| TIGRFAM | 113 | 144 | 32 | 0.0023 | ||
| Pfam | 113 | 141 | 29 | 0.0018 | ||
| ProSiteProfiles | 144 | 178 | 35 | 5.031 | ||
| PANTHER | 166 | 292 | 127 | 9.6E-127 | – | |
| Gene3D | 173 | 307 | 135 | 1.9E-24 | ||
| ProSiteProfiles | 179 | 209 | 31 | 7.366 | ||
| TIGRFAM | 183 | 206 | 24 | 0.0018 | ||
| Pfam | 184 | 207 | 24 | 0.023 | ||
| ProSiteProfiles | 210 | 244 | 35 | 9.098 | ||
| Pfam | 213 | 239 | 27 | 0.0016 | ||
| ProSiteProfiles | 245 | 279 | 35 | 11.444 | ||
| TIGRFAM | 247 | 280 | 34 | 9.3E-7 | ||
| Pfam | 247 | 277 | 31 | 1.4E-6 | ||
| PANTHER | 284 | 373 | 90 | 9.6E-127 | – | |
| Gene3D | 312 | 445 | 134 | 2.4E-26 | ||
| ProSiteProfiles | 315 | 345 | 31 | 5.47 | ||
| ProSiteProfiles | 346 | 376 | 31 | 8.901 | ||
| Pfam | 349 | 375 | 27 | 4.5E-4 | ||
| Pfam | 385 | 433 | 49 | 5.9E-10 | ||
| ProSiteProfiles | 386 | 420 | 35 | 10.83 | ||
| PANTHER | 387 | 438 | 52 | 9.6E-127 | – | |
| TIGRFAM | 388 | 422 | 35 | 3.3E-6 | ||
| ProSiteProfiles | 421 | 451 | 31 | 5.119 | ||
| PANTHER | 438 | 653 | 216 | 9.6E-127 | – | |
| Gene3D | 456 | 678 | 223 | 1.3E-37 | ||
| ProSiteProfiles | 456 | 486 | 31 | 6.401 | ||
| Pfam | 461 | 486 | 26 | 1.3 | ||
| Pfam | 487 | 534 | 48 | 1.3E-9 | ||
| ProSiteProfiles | 487 | 521 | 35 | 12.233 | ||
| TIGRFAM | 489 | 522 | 34 | 7.2E-8 | ||
| ProSiteProfiles | 522 | 557 | 36 | 7.848 | ||
| ProSiteProfiles | 558 | 588 | 31 | 6.665 | ||
| ProSiteProfiles | 624 | 658 | 35 | 6.029 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0026200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…