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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0026600 |
| Transcript ID | LotjaGi3g1v0026600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cell-wall invertase; TAIR: AT3G13790.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q43089|INV1_PEA Beta-fructofuranosidase, cell wall isozyme; TrEMBL-Plants: tr|I1MCZ9|I1MCZ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0026600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:2914225..2919273) extracted from Lotus japonicus Gifu genome v1.2.
CAAAGGTTGAAATTGAATTAAATTTTAACCAAATGGTATATGATCCGAATCTATAAATACAGTATGGGAGAGCATAAGTT TCACACACCTCACCTCATTCTCTTAAACTCCACCATGACTATCTCTTCAATTTTCTTGGTAGCTCTATTCTCTCTCATTT ATGGCAATGCTGTTCTTCCTATTGAAGCTACCCACCATGTTTATAATCTTCAGAGTTTATCTACTTATTCCTCTAAACAA CCTTATAGAACTGCTTATCACTTTCAACCTCTCAAGAATTGGATAAATGGTATGTTTTCTACAAACTTGTCTTAAATCTT CTTTCTTACCCTTCTTTTCCTTACTTTCAACAACAGTTGGGAAATGTTTTATACCTCTAACTATTTTCTACTTTGCTTGT TCTTGTCACTTGACATGTTATGCTGAAATGGACAACTTACAGACCCAAATGGTGAGTTAAATTCTCTGTTGCACTCCAAT TATGCTCTATATTTCTTTTAAGTTTCCTTCAAACACTCCCTATTTTGCATCCCATCACTTCTTTTACCTTGAGTGTAGTA AAAAAGGTCCAAATTCTTTTTAGCAGGGATAAAGCATGCATGGTACTATTTAGAAGTTTATACCGTTGTGTTTTGTACTT TTCCATACATGAATGTATGTTTGATTCCACGTTTGTGAGTTTTAGAATCAATTTTCATTCACCAGAATCATATTTAGATA TTTGGCAATCGAGTTAAAGAGTTGATCTTAGTCCCAAAATCAATTTTGCAAAGAAGCTAGAGAGGGTAGTTATGCAGTGG ATATAATCCATTATGAAATTTCATGACTAGATTTAAGAACATTACCTAATAGAAATTAATGTTTTTATAAGCTTATCCAA ACATAAACCACTTCACTTTAAACTCACTTTTACTTTAACAAATTTTACTAAAATCTAAAGTCAGACTTTTTATTGGCTAA AAATGATCGTATATGTGTCTTTTTCTGCAGGACCATTGTGGTATGGAGGACTATACCATATGTTTTATCAATACAATCCT AAAGGAGCAGTTTGGGGAAATATTGTCTGGGCCCACTCTGTATCAGAGGATCTTGTGAATTGGAGGCCATTAGATCATGC CATCTCCCCTTCTCAGCCAGCAGATATCAATGGATGTTGGTCAGGTTCAGCAACAATTCTTCCTGGAGGCAAACCAGCCA TGTTATACACAGGAATTGACCCCAACAAACACCAAGTTCAAAACTTAGCCATCCCCAAAAACATGTCTGACCCATTACTT AGGGAATGGGTTAAGTCACCAAAAAATCCCTTAATGGCACCTACCATTGCTAACAAGATAAATTCAAGCTCATTTAGAGA CCCTACCACTGCTTGGCTAGGAAAAGATGGGTACTGGAGGGTGCTGATTGGAAGCAAAACTAACACAAGGGGTGAGGCAA TTATGTACAAGAGCAAAAACTTTGTTAATTGGGTTCAAGCCAAATACCCTCTTCATTCAGCTGAAGGCACTGGAATGTGG GAGTGCCCTGATTTCTATCCAGTGCTGAATAAGATCCCATTTGCCTTTGGTCTTGATACTTCTGTGAATGGTAATGATGT TAGACATGTGCTCAAGGTTAGTTTGGATGATACAAAACATGATCACTATTTGATTGGGAGTTATGACACTGCCAAGGATA ACTTCATTCCTGATAAGGGGTTTGAGGATAACAAATCTGTCTTGAGATATGATTATGGGAAATACTATGCCTCAAAAACT TTTTTTGATGATGGAAAGAACAGAAGGATCTTGTTGGGTTGGGTTAATGAATCCTCAAGTGTTGCAGATGATATCAAGAA AGGATGGTCTGGAATCCACGTAAGTTGGACCTATACATATGTTATATTTGATATATCTATTTGTTCATTTTTCAAATGCA ACATAATATTTGATAGATATCGGATTTAGATTTCTTGCAATTGAATTTCCTAACTTCCACTGTAGTCTTTCATAATTGTT CAGATTAAAAGAGATGTTTATACACTTGAAACTAGACTTTAAAATCTAGTTTTAATTGTATGGTTAATAGCAGTGAAATT AGAAAAATCTGACTATAGAAAAGTCACATTTATATATAGCACGTTTCATTTTGTGGTGAGAAACCCTCTATAATCAATTC TAGAGAGAAGCTACAAAGTATAGCTATAGCTTCCGTACTTACTGTGTTTTGAATTGTGAGTAACTCCACACATACTATAA ATGCTAAGGCACTCAATAATTCAAGAAAGTTAGTTTATTGAGCATGACTTGTGATATGTATGGTTTAATATTTACATAAG TCGGCATAACATAAAGCCATGAAGTGAGACATGCAGGAGCTAGGTTAGGCTCCACATAAATTCATGTTGACCCAATTTTT TTAATATAAAAAAGTGGGGTAACTTTCTTGAATAATTCACCTGTATTTTTCAGACTATTCCAAGGGCTATCTGGCTTCAT AAATCAGGAAAACAGTTGGTGCAATGGCCGGTTGTGGAAATTGAGAAACTACGTATGAACCCAGTCTATTGGCCAGCCAA AAAGGTCAAGGGAGGTGAACTGCTTCAAGTTGCTGGTGTTAATGCAGTACAGGTAAGAGTAGTAATATTATTATTAATAG ATTGTTTGAATCTTTTGGTTCACATTGCTAAATGCTAATCCACAGAAGCATGTTTTCATCATCAGAGTTTAGCTCATGTT TAGGTGAAATTCAATTCTTACTTTAAAATGCAAAATCACATTGAAGTCAGAGTAAAAACAAAACCAAGAAATTGATTTGA GCATTTCTCACAATATCGACATTTCTCACATCACTTTAAATGCGCTTTTCTTACCTTCTCCAAATTTTTTTATCCATACT CTGCCTTTGCATTCGACTCCTGTTTTAATCCGAATTAATTCTTAAGCGCAGAAGCTAGTTTTAGCTTCTAGCTTCTCTCA AAAATTGATTTTAATTTTAGAATGAATTCAAAAAGATTTTCAATCATCCACAAAATGTCCCTTATATATATAAAATAGGG TTGGTATATGCTTTTTTTTTCTTCCTCTTTTCATATTAATGAATTATTTAATTTATTATTTTGGCAGTCTGATGTTGAAA TTTCATTTGAAGTAAATGAGATTGGGAAGGCCGAAGTATTGGACCATTGGATTGATCCCCAAATTCTGTGTAGTAGAAAG GGTGCAGCCGTAAAAGGAGCTGTGGGACCATTTGGTCTGCTGGTGTTTGCTTCACAAGGCTTGAAAGAATACACAGCAGT GTTTTTCAGAATATTCAAATACCAACATCAAAATTTGGTTCTCATGTGTAGTGACCAAAGCAGGTTTGTCCTCTTTAACT ATATCCATTTAATTTGTGCCAATTTTCACCAAAATTTGAGATAGATGATGTTTGGTTTGGACTATTCTTTCTCTGATATG GATGCAAATGTAATGACAGGTCTTCTTTGAATAAAGATAACGATATGACCACTTATGGAACTTTTCTAGATGTTGACCCG CTTCATGAGAAGTTGTCACTAAGAACTTTGGTAAGTTATATAACAAGGAAAATGAAAATTCCATTTCATTGGATCAATTT AGTGATCCACCAAAAGTTGCTAATGTTAAAGGTATTAGATGTATACGACAGAAAAAATTATTTAGTTTACATATATATAC GTACATGGTTCACCAATCAGTTTTAAAAATTTAAGAGCAAGTTTTGCTAACATAATTTTAGTAAATTATTGTACAAGTTT AAATAATGATGTGACAAGTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA TATATATATATATATATGCACACATTATTGTCATTTAGTTTATGTAAAAAAATTATGAAAAACAAATTGATCATTTCAAA TTCGGAATTTATAAAGGAGACGTGCACTACTAATTAAACTTTTTTAAGAAAAAATAGTAATCACTATTACTCACATTCAC ATACATGATACATGTGTGTTTGTCATTATTTTTTTTTAAAAGGTGTTTGTCATTATTATACTTCTAGTATTTTGTTTAAA TTTGTATTATGGTATACTACCAAACTATCAATAATAATATATAGCCATTTGTTTAAATTATCTACATTCTCTTTCAATTT TTTTTATCTACATTCACGTGTTTTTTTTTAATTGTAAAACATATGCGTATAATTTGTGATCAAATGACATCATATACACT GTCGATTATTCTCCTCAAGTCCTACCCAGCCAACACTTTTGTTTCTTTACATGAAGTTTTCTGTAGAAATGTTAATATAT ATCCTATAATTGAATAAATTTCTTATAAATTTTATTAATAAAACTTCCACGGATATTCTAAACTTTTTGGATACGGAATA CGGTAATAGTGACAAAACATGAACAGGTCAACAGTGATTGGCTTCTCTTTCCCTAATCCATTTAACCATTTTGGTTATGT GATGCTAAACTATAGTAAACACTCACTTCAAAATAAAATATGTAGATAATTTTATTATATAAATTAATATGAAAATTCGT TTACATTGTTCAATCATTTAATATTTTGACCTGCTAATTCTGAGTTTCTCCTATTCATAGATTGATCACTCAGTAGTAGA GAGTTTTGGTGGAGAAGGAAAGGCATGCATCACAGCCAGAGTTTACCCCACATTAGCAATCAATGATAAGGCAAAGCTAT ATGCATTCAATTATGGAACTACCGCTGTGAAGATCACAAGATTGAGTGCTTGGAGCATGAAGAAAGCAAAAGACAACTGA AACGAATCAAAACAATAAAGACCAGAAGAAGAAATTGATTTAGTGTTCATGATAATAAATGTTTATGTTCTTTTATTGGT GCCTCATATTTCATTATTGTACTATTAAAACAGGTTTTGTGTGTTATTCATCTCATACAATGTAATGTATGATAAGAAAT AGAAGAAAATTATTTTTGTCCACAATTCGTATATAGTAGTATCAACTTTTAGCTATAAAAATGGCAGAGTATGGAGAAAT TTAAGAGAG
CDS sequence (LotjaGi3g1v0026600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCCGAATCTATAAATACAGTATGGGAGAGCATAAGTTTCACACACCTCACCTCATTCTCTTAAACTCCACCATGAC TATCTCTTCAATTTTCTTGGTAGCTCTATTCTCTCTCATTTATGGCAATGCTGTTCTTCCTATTGAAGCTACCCACCATG TTTATAATCTTCAGAGTTTATCTACTTATTCCTCTAAACAACCTTATAGAACTGCTTATCACTTTCAACCTCTCAAGAAT TGGATAAATGACCCAAATGGACCATTGTGGTATGGAGGACTATACCATATGTTTTATCAATACAATCCTAAAGGAGCAGT TTGGGGAAATATTGTCTGGGCCCACTCTGTATCAGAGGATCTTGTGAATTGGAGGCCATTAGATCATGCCATCTCCCCTT CTCAGCCAGCAGATATCAATGGATGTTGGTCAGGTTCAGCAACAATTCTTCCTGGAGGCAAACCAGCCATGTTATACACA GGAATTGACCCCAACAAACACCAAGTTCAAAACTTAGCCATCCCCAAAAACATGTCTGACCCATTACTTAGGGAATGGGT TAAGTCACCAAAAAATCCCTTAATGGCACCTACCATTGCTAACAAGATAAATTCAAGCTCATTTAGAGACCCTACCACTG CTTGGCTAGGAAAAGATGGGTACTGGAGGGTGCTGATTGGAAGCAAAACTAACACAAGGGGTGAGGCAATTATGTACAAG AGCAAAAACTTTGTTAATTGGGTTCAAGCCAAATACCCTCTTCATTCAGCTGAAGGCACTGGAATGTGGGAGTGCCCTGA TTTCTATCCAGTGCTGAATAAGATCCCATTTGCCTTTGGTCTTGATACTTCTGTGAATGGTAATGATGTTAGACATGTGC TCAAGGTTAGTTTGGATGATACAAAACATGATCACTATTTGATTGGGAGTTATGACACTGCCAAGGATAACTTCATTCCT GATAAGGGGTTTGAGGATAACAAATCTGTCTTGAGATATGATTATGGGAAATACTATGCCTCAAAAACTTTTTTTGATGA TGGAAAGAACAGAAGGATCTTGTTGGGTTGGGTTAATGAATCCTCAAGTGTTGCAGATGATATCAAGAAAGGATGGTCTG GAATCCACACTATTCCAAGGGCTATCTGGCTTCATAAATCAGGAAAACAGTTGGTGCAATGGCCGGTTGTGGAAATTGAG AAACTACGTATGAACCCAGTCTATTGGCCAGCCAAAAAGGTCAAGGGAGGTGAACTGCTTCAAGTTGCTGGTGTTAATGC AGTACAGTCTGATGTTGAAATTTCATTTGAAGTAAATGAGATTGGGAAGGCCGAAGTATTGGACCATTGGATTGATCCCC AAATTCTGTGTAGTAGAAAGGGTGCAGCCGTAAAAGGAGCTGTGGGACCATTTGGTCTGCTGGTGTTTGCTTCACAAGGC TTGAAAGAATACACAGCAGTGTTTTTCAGAATATTCAAATACCAACATCAAAATTTGGTTCTCATGTGTAGTGACCAAAG CAGGTCTTCTTTGAATAAAGATAACGATATGACCACTTATGGAACTTTTCTAGATGTTGACCCGCTTCATGAGAAGTTGT CACTAAGAACTTTGATTGATCACTCAGTAGTAGAGAGTTTTGGTGGAGAAGGAAAGGCATGCATCACAGCCAGAGTTTAC CCCACATTAGCAATCAATGATAAGGCAAAGCTATATGCATTCAATTATGGAACTACCGCTGTGAAGATCACAAGATTGAG TGCTTGGAGCATGAAGAAAGCAAAAGACAACTGA
Protein sequence (LotjaGi3g1v0026600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIRIYKYSMGEHKFHTPHLILLNSTMTISSIFLVALFSLIYGNAVLPIEATHHVYNLQSLSTYSSKQPYRTAYHFQPLKN WINDPNGPLWYGGLYHMFYQYNPKGAVWGNIVWAHSVSEDLVNWRPLDHAISPSQPADINGCWSGSATILPGGKPAMLYT GIDPNKHQVQNLAIPKNMSDPLLREWVKSPKNPLMAPTIANKINSSSFRDPTTAWLGKDGYWRVLIGSKTNTRGEAIMYK SKNFVNWVQAKYPLHSAEGTGMWECPDFYPVLNKIPFAFGLDTSVNGNDVRHVLKVSLDDTKHDHYLIGSYDTAKDNFIP DKGFEDNKSVLRYDYGKYYASKTFFDDGKNRRILLGWVNESSSVADDIKKGWSGIHTIPRAIWLHKSGKQLVQWPVVEIE KLRMNPVYWPAKKVKGGELLQVAGVNAVQSDVEISFEVNEIGKAEVLDHWIDPQILCSRKGAAVKGAVGPFGLLVFASQG LKEYTAVFFRIFKYQHQNLVLMCSDQSRSSLNKDNDMTTYGTFLDVDPLHEKLSLRTLIDHSVVESFGGEGKACITARVY PTLAINDKAKLYAFNYGTTAVKITRLSAWSMKKAKDN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 20 | 41 | 22 | - | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| PANTHER | 27 | 597 | 571 | 0.0 | – | |
| PANTHER | 27 | 597 | 571 | 0.0 | – | |
| Phobius | 42 | 597 | 556 | - | – | |
| SUPERFAMILY | 65 | 396 | 332 | 9.11E-105 | ||
| SMART | 74 | 551 | 478 | 9.2E-237 | ||
| Pfam | 74 | 395 | 322 | 4.0E-109 | ||
| ProSitePatterns | 74 | 87 | 14 | - | ||
| Gene3D | 79 | 405 | 327 | 5.0E-230 | ||
| CDD | 80 | 384 | 305 | 5.14119E-167 | – | |
| SUPERFAMILY | 395 | 593 | 199 | 2.22E-34 | ||
| Pfam | 398 | 590 | 193 | 1.9E-28 | ||
| Gene3D | 406 | 592 | 187 | 5.0E-230 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0026600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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