Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0029400.6

Overview

Field Value
Gene ID LotjaGi3g1v0029400
Transcript ID LotjaGi3g1v0029400.6
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description CTC-interacting domain 4; TAIR: AT1G54170.1 CTC-interacting domain 3; Swiss-Prot: sp|Q8L793|CID3_ARATH Polyadenylate-binding protein-interacting protein 3; TrEMBL-Plants: tr|I1M589|I1M589_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0029400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:3218345..3227062) extracted from Lotus japonicus Gifu genome v1.2.

TATCAGTTTGTTTCTGTTTGGTTTTATTTTTCGGGTGTTTCTTTCTTTCTTTCTGCTTCGTCGCTCGCGCTCATTGTTTT TGTTTTTGTTTTATTTTTGCACCTTAACACACTCTCTCTCGATCACACCACCGATCACCAAACTCCTCCTCCGCCTCCTT CTCCGGCCACCGCGCTCCTCAATCAACCTTCTCAAGGCTTCAATCTTCAGCTCATCCTTTCAACCTCTACTGCAATCAAC CAATTAGGTCGTGATCGAGCTCTTACAGGTACGCAATTCGTTGTTTCAATTCATCTCTCACTCACTATTCTCCATTCATC CTCGTTGATTGGTCCTCTGTGTTGGCTATTCATTTTATATATATATATATATATATATATATATATGCTTTGATCCTATT GTTACTGCTCTGCAACTTAGGGTTTTCGCCTTAGAAGGTGTTATAGATTCCCATTAGGGCGTAAAATAACTTCTGCAAGA TAGGAATATCAAATTCTAAGTCATAATCCTACATAGAGAGGCTTCAAAATGACCAAACATACAATAGCATTTACATGAAT AAGGGACATCAGTTTCTGAATTTTCTCTATATTTTGGGAATTGAAATAATGATAATTCCTATTAATAATTCTCTATAGTC CTTCCTACAACGCGTTTGATAAGAGTTTCGAGCAGGCTGGCACTGTCGGGTGTTTATGCCTGATAATATATATAGATTGG GGACCCGGAACGGATGAGGGAATGTCCCAAATTGGCAAGCTCTCCTAAAGTCTAATACTTTAGTTGTTCCCAATTCCCAA AGTCTAATACTTTAGGAAGAAGGAAAGAAGCTTGCTGCTGTGTTATAATTTTTGCAACATAGCTAATGTTATGCGCCTTT CATTTGTATAATTCGTCTCCAGATTTCCTTATTTTGTTCTCAAGAAGCCTTATACTGTCTATTGAAAATTCTATAACTTT ACTTGTAGAGTGCTCTTGCTTAGAGATATAGGATTCTGCTTGGAGGTGATATAGTACTCACTACTCAGTTTAGGAAGGGT CATGGGAAGAAGGGAGTGAGGGTAGCCAGTGTTTTGACTTTTAGGCTGCATTTGGAATTGGGAGGAGGGGTAACACCTAA AAAATTTAGTCCAAGTAATTTTTTGTTTATTTTAATGTGTAACATAAGCCTCACTGAGAGCCATTCAGTTCTGGCAGTTA CAGTCATGCCTATGGGAGGGTGTATTCCCACCCCCCGTCCCAACCTCAAGTTTTCCATTGAGTCTGGTTTTGTTTCGTTT ATTTTTTAATATAATATGTTGAGGCATTTGAAGCATTTATTTAATGTGTTAACATAAGCTTCCTAATTATCAAACAGATA TGATAGTTACAATTACAAGCTATTTTTTAACTTGTAAAGTTTGATAGATTTGTATCTTATTCAATGGTTTTTCCTTTTTC GCCTCACAAACTTCCCATTCATTTATTTTTTGCACTAATTGCATTAAACTTAGTTTGGAAGGAACTTATTTATCCAAATT TATGGTTTACTCCAATTGAATGTTAAGTGGAATACCGTACAATAAGATATTAAACAATGTAGTAGTGATGATAGCAACAA AATGAATGCTAATCCTGTTGCTTTGACTCAAAGTATTTAGTATTTTTTAAAGTTAATTATTGCGCTTTTATGCTCATAGC TTAATTTAGTGTTTGTACTTGGTAGTATAAATATTTACTAATATGCAATCCTATGAACATTTTTAGTTATTCAGAAAAAA GAGTCTCAAATGTCATTCTATTTCGGTAGCTCAGATAAAGAAAGCCCCCCCAGCCCCCCACCCTTTTTCTGTGTGTCTGT GTCTCACCTCCGCTTCTCTCTCCTTTTTCTGTGATTGCTTCAACATTTGTCTTCTCTGTCCACTTGATCCTCAATTCAAG CATACTCTTGATCATTTCAATCCCCAGCTGAAAGAGATTGCTTCATATGCTCAAGCTGTTCTGGAACTAGGCGGTTAGAT TGTCATCAAACTCATAGGGGTAGGCAAGTGATATTTTAATTTGTATCTCGTTGCTTTGTGTTGCTCTTGCTCATCATGTG GGTCTGCTCCCTAGTATCGAATACTCTGTTTAGTTATTTATTTATGTTAGAATTCAATCACACAAGTGAGGGACTTCTCA CTTCTGTGTTAAATTTCCAACATAAAGGGTTTCAGCTAAATGAAACTTCACAATATTACACACAATGATTGCTACAAATA AGATGTCAATTTTGAGAGGATACCTAGTATGAATTAGGGACCCAGACTATGTAATGGAATCCCTACATTCGGCAGTTCCT TCTAGAAACTAATTTCCTTATTGGATGATGCCCGTTTTGAGGTGTTGAAACCTAGTTGCTATTTATTTCTCTTTAAAGAG TGTTATCTTGCCCAAGGCTGTCGTTGTCAGGGGTGTTCATTGATTTTGGTGATCAACCCAAGAATCCAAACTCGACAAAT CAAGCTCATTATGATTTTTTTCCTACATGTTCGGGTCCAACCTAAACCAAACTAATGTAAGGTGAGTTTTATTGGTTCAG GCTTTGGGTTTGTCATTCAAAAGACTGAAAACCAGATACCTGAACTATTACGTATTTTTGGCTTGCAGTCATTGGCTGCC AAATTGCATTGACAAGTAACAACTATGCTTAAGGCTATTAACAATGACAGTTGCTCTTCTGTTGCTTTCTTTTATAATTT TACAGCATGTTAGCGATGCACCTTACTTCAATGTCGTAATCTTCCATAGTATACGGATTTTTTTTTTGCTTGCAGCCATT GGCTGCCAAATCTTATTGATTACTGTGTTTAAGACTATTAACAATGGCAGTGCCTCTTCTGTTATTTACTTTTAAAAATT CAGCTTGATTTCATAAAATTTCTGTCTTGAAATCTTAAGGTCTTTGGGGATAATTGTCTAATGAATATATGTTCATTCTT TCTTTTGCCATTTTTTATAAGTGTGCCCTTTGTGTTGAATTTCTAAATCTTCTAGATTACAGGGGCAGTGTCTGTAAGTG AGGATGAATTTGCAACAACCTGGGCAACCTAAGTCCTCTAATGGATATGGCCGTCGAAAATCTGAAAGAGAAGGGGCAAA TAAGTCAGAGAATAAGATCCCATCTGGAAATTTAAATGCCAGCAGATTGACAAGTACAGGTGATTCTTTTAGCTGAATAG TTTAATATCTGATCTGTCTCAATATTCACTATTTTGATATATCTTTTTAGTTGCAGCAGGTGCAGTGACTGGCAGTGAAG GTAGTAGTTATGAGAGTCCCTCACATGATCGACTCGTGTATATAACCACATGTCTAATTGGGCACCAGGTGGAAGTCCAG GTGAACAATGGGTCTATATACTCAGGAATATTTCATGCAACAAATACAGACAAAGATTTTGGTATGTCCTGTTATATTCT TGTTATTGGTTTTTGCGATATTGAAAACTATTGATTGTATGATTGCACAACTATCTGATGTAGGATGGAATAATGCTTAT TTTGAAATTAAGATAATTATTTTATTTTAGGTATATTTTGTTATTTCCAATATGTGGCAATTTTTGAATTTTGACTAGGG TTGTTGTTTAATTGGGTTTTGACTAGGATTGTTCTATATCACTATCCAATTAGAATTCTGATATCTATTTTCATTATTAC TTCTGTACGTCATAGAGAATTTGACTTTGCTTCTTATGTCATTATATTATTATAGGAATCATTTTGAAAATGGCTCGCTT GATAATGGATGGTTCTTTACGAGGGCAGAAGTCTGGTGAAGAATTTTTCAGCAAGACGTCAAAGATTTTAATTATACCTG CCAAAGAACTTGTACAAGTTATAGCACAGGTTTGATACTTTTCAAGTGTCTTCAACATACATCGGAAATTGTGGTTGTTA CTCCAGCTAAAAATATATGCAGCATTATTTTATCAAGTTGCTGTACTTTTAGCAATAGTGTTGGAACATTTGATCTGGAT TAGGTGAGGTTGCTTCAGCCCATTGCTAACTTGTTTGCTGATGATATTTTTGGTGTGTCAATCATGGCAGGATGTTTCTG TTACCAGAGATGACCTACTGAGTGAATCTTATCATGACATGCATCAGGAAATCATGGTTGATTCATTAATATCTCAATCT CGTCATGTTGAATCAGGGAGAGAATTAAAACCCTGGGTACCTGATGAAGATGATCCACAGTGCCCTGAACTGGACAATAT CTTCGATGGCCAGTGGAATAGGTTGTTGTCCTAAACAAATTTTTATGAGCAGTAGAATTATATCTTTTCTTGAAACTTTG AAAACAGCATGCTCGTCAGTTGTCTTCATTCCATTGAGCTTAGATGATTGAGGAACTATATAGTACATAGCTTTTAGAGT CTACAATAGGATTTTACTTTAAAATAAAGCCCAGCTGAAGCGGTAGATTTCAGAATGTTTCTTTTCTACTTTTCTTTTTC TTGTTTATTGAAGACGTTTCTCGTTAATGTTATGATTGACTAAGAACAATAAGAACAGGACAATAATAAGGTATACGGCC TAAGATATTGCCTAAGAAATTATCAAAGGCCATTGGCATACAATTTGGTTGTGAGTATGTTCTTGATATTTCAAAAAATA ACAGGGTTTTTGTGGCATATGCATAATTAATTAATTATTAAGAGGTTTGACTGAGCATATAGGATTGTTACGGCAATACT ACCATTATTTTATATGCAGGTTCTCCTCTCTGTTTTTTCTTTCTTTCAATATCTTCCTAATCTCTCTATTTTAATTTATG TTGGTGATTTCCCCCCATTTTTTGCATTTTTTAAGGGGTTGGGATCAGTTCGAAACGAATGCGACATTGTTTGGTGTAAA AAGCACATTCAATGAGGAACTCTATACAACAAAGCTTGAAAAAGGGCCTCAAACAAGAGAATTGGAAAAGCAAGCTTTAA GACTAGCAAGAGAAATTGAGGGCGAGGAAACCCATGACCTCCATCTTGCAGAGGTTAGTGTTACTTCAATAATCTTCTCG TTCTTCTTTTTCTTTGCTTCTTAAGAATTTGTGTAATTTTATATTTGATTGCCTATTTGAATTCCTCAAACTATATACTT TTTAACATCAGGAAAGGGGCCTTCCCATTCATGAAGACTTTGATATTGATGAAGAAACTAGGTTTTCTTCAGTCTATAGG GGTAAACATGTTGATGATAGTGAATATGAGGAAAATGAGAACATACTGTTGGATTCACACAATTCTGAAACTTTCGGTGG TACATTTGGTTCGGTCATTAAGAGGCCTGGGGAAATAAATAGTTGGAAAGGCAATGGTGGAGCTCATGCATTGGCAAATT CCTTCTCCTTGGTACCTTCTCAATCCATTATTTAACTATTAAAAGTGTGGCATTTAGTAATACCCAATCATTTGTCACAT TAGAGGGTACTGGCTTGTTTTTTGTTGTTGTTGAATACTGCTACATTGTGTTTGTGCATTCCTATTTTATTAAATACTTT CTTTTAGATTTTGCTTCTATTTGGATAATCTTTTGTTATGCAAAGATAATGCTCTGATGTCTCATACTTTACTTCTATTT ACAGTATTATTTCATGTTAACTGTATGTTCAGGATTACCCACCGCAGCCATCTCAATCAAGTATTGGTGTCAATTTAATC CACTCTGGTTCTTATGATCATGCTAAGCAGTTAGCATCTGAACTCCCTGCTAAAATCTATTCTTCTTCAGATGGGGAAAG CAGGTGTTTGTTGCCTTTTTCTCTTCTGTATATAATTACTTGTATATACTGTATTGATTTGTATTGTTTATCCAAAGGTT TTATTTCAGAATTTAAAAGCATAAACATCAGATTTGATGTGAGTTTTCATATTTAACAACTTTACAGGATTCAGGAGATC TCGGTTAGTAATTTACATGGAGCCAAGAGTAATACTAAAGAAGAAAATTATATAGTGAGTTGAAGTTTCAGCATTATTAC TCAAACTTTTGTCAACATATATATCTCACCTGTGATTGCTAGTGGTTCTAACACTACCAAATCTTATTTTTATTTTCTTC TTTAATTGGTTCAGTTTGCTGAGGATGTTCAACTGTCAAAATCTGAAGGTTTGTGAACTTTTTTCTTAGCTTCCTCTGTT CGAACAGATCTGAAGTGTTATACCTAAAATCATGCGGATAAAACTAAACCATTCTCATATAAAATGATAATTCGGTTTTA TTATAAACGGGGTGCAAAAGCTTTATATTAGTACTCAATAGTACTTCTGACTTCTGAGAATCTGAATGGCAGCTCTCACC TACATTTGAAATTTAAGTTTTGTGGCTGATTGTTTCATCATATTCCTCTGATCTTAGAATATGTAATGCACAGATTCACA GGCATCACTCTACTTGAAGAAAGATGGATCTGATAAAGGAGCATTATTATCTGCGAATGCCAGCTCCTATGCCCCTTCTT CATCTCATATTATATCAAAATCTCATCAGAAGACGGGATCACCTGGGGAATTGATTGAGGGTTCAGCATATGGCAAAGGT AATGTGGAAACAAAGTTTGTAAATTTACGTGGGACATCCCGTGGGTCAGATTCTATGGGAGGTGTGGCGGCATCTTCTGG TCCTCGTTTATCTCCAAGTTCATCAGTTGGTTCATTGTCGTCTGAAAAGTCAACTCTGAATCCCAATGCAAAGGTGAGGA AGTGATAGATTGATCTTTTTAAAAAGTTCAGAGTTGGTTCTAGTTTTTTGATATAACTGATATATGCCTGAGTTTCCCGT TTGTTGTTTCCTTTTGGTGTTACAAGGAATTCAAGCTCAACCCTAATGCCAAGAGTTTTATTCCATCACCTACTCGACCT CCCACTCCGGTGTCCGATGCTTCCTTCTATTTTCCAACTAATGTAACAAACATGCAAGGCATGCCTATGAGTATCGGAGT AAGTCATTCAGAGCAATTACTGAACATATAACGAATAGAGTTCATAGTTGTGGGGTGAAGTTACTTCCCTAAGCTTACTG CAAAATTTGAGTTTTATCAGACCCTAGGATCATTATTGAGTAACCAATTGATATCACAGTCAGCACTGTCACAACATGTC CATGTTATGTGTTGGGCAGGTTATGGCAACTTCTAGTGCGGTTGTCCAATCTTATTGTGGGTAAAGTTTGTTCTTGTAGC CATTAATTAATATAAAGATAAATGCCCCCATTTTGAGGAATAGGGGCTTCAATTTTGATATTCCGGAAACGTGCTTCATA GATCTGGTTTAATAGTTCACAAAGGAGGCTTTGCAGAATTTTTCGGGTTGCACTTGACTTGATAATCTCTTCTGTGCCTT GGTTCTTTCTACAAACTTGATGATTTTGCATATGGCGTGCAGGTTGGAGCTACTTTTTCTGGGCCACAGCCTATCATATA TAATCAACCATTAGGCCAAATGCCATCTTCTCAACCATATTTTCAACCAAATGGACCACAGGTACATATCATTTGTAGTA TCTCACTGGTGACTTACGTGAATACTGCTGCTTTGTTGTAATTGTCTAATATGTAATTGCAGTATGGACAGCTTCTTGGT CATCCTAGGCAAGCTTTGTACATGCCGAGTTACCTACCTGTAAGAACTTCCATGTTTTCTTCATTTTCTTCTTCAAAACA AAGAATGATAGAGAATTGAAATTTGCTTCTTATATTTAATTTACCATTTATTTATCTTTATTCTTTATCTGTTTTTAGTT TACTTACTCTAGTTAGAAAACATCATGTGCTCTGCATTTTCATTTGTCTCATTGAGAGAAGATAAATGATAAAATCAACT ATGAGTCTGTTTGGATGCGGGTCAAAGAGATTTTATTGCAGTTTATTCTGTACTTATCATTGTAGATAAGCTCCAATAAG TGATTTTTAGTCCGTATCCAAATAGAATGTTTCTCAAGAACTTGTTCATCACTTGATCGCTCCACCTTGATATATCATGC ATGTTGGACATTTTTCCTTGTCACAGTGCTGGTACCAAGACTTTTCTTCACTAAGGCATCTCAGTTGAATTTAAACAATC ATCTCTGTCTGTAATTCATTATATTGCTTTTGAGAGGTTTTCTCTACTCAATGTTCAACTGGATCTTCTAAAATCGGTAT TTTACAGGAAATGCCGTACAAAGGACGGGATTATTGACGACCTACCTCACTGACTGTATTATTAGCAAGTGACCTTGCTT GAAAAGAATAAACCAAGTGGATGTCCTGAAAAGTTTTAAATTATGATATCTGCAAGCTTATGTGAAGATTTCTAAAGGTT TATAGATTCCAAGCAAGTTGGCTCAAATTGGAATATAATTTAATGACCTTGTGTTAATCTATATACATGTTTTGGGGTTT CTCAGGTTTTGGTTGTATAAATAGCTGAACTCAGATTCACCCCCACCCTTTCCTTTATTCCTTTTTAATACAGTGCAACA TTTACTTTTTTATTACTGCTCCTTAGGCATTCATCTGAAACTTAAGCATGTCTGCAGTCCTTGGGTTGCTACCAATTCTT GATTCTCCTTTTATACTTTGGAATGTGTGAATTCCTGATTATGTGTGGAGACCATCATGCCCCCCTCATGATGAAACAGT GGTATCAGATTCGAGTGTATGACCTTGTGACTTGACATCCTTGGTGATCGGTAGCTTCCTCTGAATGTGGGAACTCAC 

CDS sequence (LotjaGi3g1v0029400.6) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAATTTGCAACAACCTGGGCAACCTAAGTCCTCTAATGGATATGGCCGTCGAAAATCTGAAAGAGAAGGGGCAAATAA GTCAGAGAATAAGATCCCATCTGGAAATTTAAATGCCAGCAGATTGACAAGTACAGTTGCAGCAGGTGCAGTGACTGGCA GTGAAGGTAGTAGTTATGAGAGTCCCTCACATGATCGACTCGTGTATATAACCACATGTCTAATTGGGCACCAGGTGGAA GTCCAGGTGAACAATGGGTCTATATACTCAGGAATATTTCATGCAACAAATACAGACAAAGATTTTGGAATCATTTTGAA AATGGCTCGCTTGATAATGGATGGTTCTTTACGAGGGCAGAAGTCTGGTGAAGAATTTTTCAGCAAGACGTCAAAGATTT TAATTATACCTGCCAAAGAACTTGTACAAGTTATAGCACAGGATGTTTCTGTTACCAGAGATGACCTACTGAGTGAATCT TATCATGACATGCATCAGGAAATCATGGTTGATTCATTAATATCTCAATCTCGTCATGTTGAATCAGGGAGAGAATTAAA ACCCTGGGTACCTGATGAAGATGATCCACAGTGCCCTGAACTGGACAATATCTTCGATGGCCAGTGGAATAGGGGTTGGG ATCAGTTCGAAACGAATGCGACATTGTTTGGTGTAAAAAGCACATTCAATGAGGAACTCTATACAACAAAGCTTGAAAAA GGGCCTCAAACAAGAGAATTGGAAAAGCAAGCTTTAAGACTAGCAAGAGAAATTGAGGGCGAGGAAACCCATGACCTCCA TCTTGCAGAGGAAAGGGGCCTTCCCATTCATGAAGACTTTGATATTGATGAAGAAACTAGGTTTTCTTCAGTCTATAGGG GTAAACATGTTGATGATAGTGAATATGAGGAAAATGAGAACATACTGTTGGATTCACACAATTCTGAAACTTTCGGTGGT ACATTTGGTTCGGTCATTAAGAGGCCTGGGGAAATAAATAGTTGGAAAGGCAATGGTGGAGCTCATGCATTGGCAAATTC CTTCTCCTTGGATTACCCACCGCAGCCATCTCAATCAAGTATTGGTGTCAATTTAATCCACTCTGGTTCTTATGATCATG CTAAGCAGTTAGCATCTGAACTCCCTGCTAAAATCTATTCTTCTTCAGATGGGGAAAGCAGGATTCAGGAGATCTCGGTT AGTAATTTACATGGAGCCAAGAGTAATACTAAAGAAGAAAATTATATATTTGCTGAGGATGTTCAACTGTCAAAATCTGA AGATTCACAGGCATCACTCTACTTGAAGAAAGATGGATCTGATAAAGGAGCATTATTATCTGCGAATGCCAGCTCCTATG CCCCTTCTTCATCTCATATTATATCAAAATCTCATCAGAAGACGGGATCACCTGGGGAATTGATTGAGGGTTCAGCATAT GGCAAAGGTAATGTGGAAACAAAGTTTGTAAATTTACGTGGGACATCCCGTGGGTCAGATTCTATGGGAGGTGTGGCGGC ATCTTCTGGTCCTCGTTTATCTCCAAGTTCATCAGTTGGTTCATTGTCGTCTGAAAAGTCAACTCTGAATCCCAATGCAA AGGAATTCAAGCTCAACCCTAATGCCAAGAGTTTTATTCCATCACCTACTCGACCTCCCACTCCGGTGTCCGATGCTTCC TTCTATTTTCCAACTAATGTAACAAACATGCAAGGCATGCCTATGAGTATCGGAGTTGGAGCTACTTTTTCTGGGCCACA GCCTATCATATATAATCAACCATTAGGCCAAATGCCATCTTCTCAACCATATTTTCAACCAAATGGACCACAGTATGGAC AGCTTCTTGGTCATCCTAGGCAAGCTTTGTACATGCCGAGTTACCTACCTGAAATGCCGTACAAAGGACGGGATTATTGA 

Protein sequence (LotjaGi3g1v0029400.6) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNLQQPGQPKSSNGYGRRKSEREGANKSENKIPSGNLNASRLTSTVAAGAVTGSEGSSYESPSHDRLVYITTCLIGHQVE VQVNNGSIYSGIFHATNTDKDFGIILKMARLIMDGSLRGQKSGEEFFSKTSKILIIPAKELVQVIAQDVSVTRDDLLSES YHDMHQEIMVDSLISQSRHVESGRELKPWVPDEDDPQCPELDNIFDGQWNRGWDQFETNATLFGVKSTFNEELYTTKLEK GPQTRELEKQALRLAREIEGEETHDLHLAEERGLPIHEDFDIDEETRFSSVYRGKHVDDSEYEENENILLDSHNSETFGG TFGSVIKRPGEINSWKGNGGAHALANSFSLDYPPQPSQSSIGVNLIHSGSYDHAKQLASELPAKIYSSSDGESRIQEISV SNLHGAKSNTKEENYIFAEDVQLSKSEDSQASLYLKKDGSDKGALLSANASSYAPSSSHIISKSHQKTGSPGELIEGSAY GKGNVETKFVNLRGTSRGSDSMGGVAASSGPRLSPSSSVGSLSSEKSTLNPNAKEFKLNPNAKSFIPSPTRPPTPVSDAS FYFPTNVTNMQGMPMSIGVGATFSGPQPIIYNQPLGQMPSSQPYFQPNGPQYGQLLGHPRQALYMPSYLPEMPYKGRDY 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 639 639 0.0
MobiDBLite 1 39 39 -
PANTHER 1 639 639 0.0
Pfam 64 146 83 2.2E-25
Gene3D 71 141 71 6.5E-6
Pfam 223 293 71 4.7E-24
SMART 223 294 72 1.2E-35
MobiDBLite 455 479 25 -
MobiDBLite 455 471 17 -
MobiDBLite 493 535 43 -
MobiDBLite 510 535 26 -
Pfam 525 536 12 2.8E-4

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0029400.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…