Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0032100 |
| Transcript ID | LotjaGi3g1v0032100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hydroxyacylglutathione hydrolase; TAIR: AT1G06130.1 glyoxalase 2-4; Swiss-Prot: sp|Q8LDW8|GLO2D_ARATH Probable hydroxyacylglutathione hydrolase 2, chloroplastic; TrEMBL-Plants: tr|I1MD49|I1MD49_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0032100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:3427403..3430423) extracted from Lotus japonicus Gifu genome v1.2.
ATTCTAGATTTAATTTTAAGGTGCTTGCTTCAGTTACGCTTTTGCATTTATATGTTGTATCATTTGTTTGTTTGTTTGTT TGTTGTGATTGTAACCTATCAGCAATAGCTAGAGTTGTTTTTGACTTATTACTTTGATTGAAGAGGTCACTCACTATTGA TTATTTGGCAATGGAGGTTGATTATTTTCTGTTTCTTAGATGAGAACTGGGTTTAGCGTGTGGCCGGATGTGAGACAGCT TTGCTTTAGAAAAGACTTTCTATACGGATTTATGAGGTTCTTTTCTACTCCGTTGAAAACACTGCGTGGGGGAGCTAGTC GCTCGCTCAGAGTGGCTCGGTTTTGCAGTGTTGCAAATATGTCTTCCTCGTTGCAGATTGAATTGGTGAGAGCAGGTCTC TTACTGCTTTTATAAATTGTTATGGTGCAATTGGATTAAGTATTATCGTCAAGTTGCCCAAGCTGATAATGTTTCTCAAG AAATATGCCGTAGGCCTAATTTGTGATATGTTATCATGTTTTTGAAAAAAAATTAGGTACCTTGCCTGAGGGACAATTAT GCATATCTTTTACATGATGTGGATACGGGTACAGTTGGTGTTGTTGACCCTTCTGAAGCTGTGCCTATCATAGATGCGTT GAGCAGGACAAAACGAAATTTGACATACATACTCAACACCCACCACCATCATGATCACACTGGTGGAAATGTGGAATTGA AAGAAAAATATGGAGCAAAGGTATGGTATTTATATCTTCTTGCTCCACTTTTTATCAATATTCTCTATGTAATTTCAGTG AATAGCATTGGAGAATAATAACAAGAGTTTGTTTGTGTTTGAAATACAACTCCCCTTGTATAGAATAGATTAGCAGTGGG GTTTACCTCTTGTCCAACTTAGCATTCATGTTTGGCCTAATAACTATGAAATTTGGCAAAATAAAGTGTTGCAAATTTGA ATGGATCAGTTATTGACAGTTTGGCATATTAAGAACTTCTGTGACAAATCAAACAATTTGGAAGAGTTGATTGGAGTCTG TGATGTGTGTTTCTAAATTATGCTTACTTAAGGAAAAGATCTAGATTATCCAAAAGCAACATTTGATGTAGTTTTTATAT GCTTACTCATTATACTTAGGGTAAATGTTAACCTTTCCTTTGTTGCTAAGGTAATTGGTTCGGGAGCTGACAAGGAAAGG ATCCCTGGGATTGATATCTATTTGAATGATGGTGATAAGTGGATGTTTGCTGGCCATGAGGTGCATGTAATGGACACGCC TGGTCACACCCGAGGTCACATTCATGCCCTATTTGCAGTTTTAGTGAATCATCTTAATGTTGATTACTTGATTTTTATTA AAAGCGGCGTAGTCTTTTGTGGCTCTTTTTTTCCCTGCTAAATTTCTATTTATTTATGCTGAAGCAGGCCACATTAGCTT CTACTTTCCTGGATTTGGGGCAATTTTTACAGGAGACACTTTGTTTAGCTTATCATGTGGCAAGCTCTTTGAAGGAACCC CAGAACAGGTTGGATTGAATTGCATTTACTTTTCCACATTCATTTTAAGATTTGAGCTAGTCGTAAGTCGTTGCATCTTT GATGTCTCATAGTTTGTATATCTTGTTTTACCCCTTTGTCTGAAGTCCTTGAAATTTTGGAATACCTTCTTAAAGGGACT AGATTGAATAATGTTGCTTTCACCCCCTTCTTTGGGGTGGAAAGAGGTGGAAGGAGGAGAGAGATAGGAAGAAAAGAAAA AGTAAGAGAGAGAAAGTATGAGATGTGATAGATGATAAGAGGAGAGAGATAGAAATAAAATGAAAGGAAATGAGGTGTGA ACATATCATTATTGGACTAAATTTGAATTGCAATTAAATGAGGACTTTGGGATAACTGGTACCCTTTTCTGCAACTCACA ACCTGTGAATGTAAGATGCCTGTATAAAATATGTTACTGTTATTTGACTTATTTCTGGAAGGCCTTATATTTGATGAGGT TAGGGGAGTCTTTTCCATAACCCATTATATGTTTTTTATTTTTAAATTGCAATCTAAGTGTACGAAAAGTTTGATTGAAT CATATGTTGTGCCATTTCTTTCTGTGTTATTCAATAACAGTTATTGTCTGATTAAGAAATTAATACAACAACAACCAAAG CCTTATCTCACGAAGTGAGGTCGGCTATATGGATCACTCGATGTCCATTGCGCATGATTAAATACTTGTCTAGTTATTGT TACAATAATGCTTCCATTTTGTTCTCTGAATATATGTCTTTGTGAGGATGTGCACATCATACTTTTATGTCGAGAATATT GGATATTCATGAGTTATGAGAATATTGGATATTCATGAGTAAATATGCTGATGCAATGTGTGGTTGTGAATGCAAGCCAA TTCTTGCGTGTCAAGTCACTTGATAAGCCTGTAAAAGATGTTATATTTTCAATTATTTAGAATTTCATCCATGTTACAGA TGCTATCTTCTCTAAGCAAGATCATGTCTTTGCCAGAAGCTACAAGTGTATACTGTGGACACGAATACACATTGGTTAGT TATTTTCTACTTTCATCCTTCATATAACTTTGTTTTCTTAGCCCAAGTGCTGCGGAATTTACATTGATGCTTTGGGTTTG GCAGAGTAATACAAAGTTTGCACTGTCTATCGAACCTGAAAACAAGGAACTTCAAGCTTATGCTGCTCATGTAGCTTCCC TTAGAAATAAAGGCTTACCCACGGTAAGTTGTTGAACCACGTTTAATTATTAATATTTTTCACGCGCCACAAATCACTGT TATCAAGCTTTGTTAGTGTGTTTGAATCCTTTTATGTTTTGCTTTAACCAAATGACCAATTACTGTTTTTCCAGATTCCA ACCACGCTGAAGATGGAAAAGGCTTGTAATCCATTCCTCCGTACATCCAGTGCACAAATCCGGCAATCCTTAAAGATTGC AGCCACAGCAGATGATATAGAAGCCCTGGCTATCATACGGCAAGCAAAAGATAATTTTTAA
CDS sequence (LotjaGi3g1v0032100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAACTGGGTTTAGCGTGTGGCCGGATGTGAGACAGCTTTGCTTTAGAAAAGACTTTCTATACGGATTTATGAGGTT CTTTTCTACTCCGTTGAAAACACTGCGTGGGGGAGCTAGTCGCTCGCTCAGAGTGGCTCGGTTTTGCAGTGTTGCAAATA TGTCTTCCTCGTTGCAGATTGAATTGGTACCTTGCCTGAGGGACAATTATGCATATCTTTTACATGATGTGGATACGGGT ACAGTTGGTGTTGTTGACCCTTCTGAAGCTGTGCCTATCATAGATGCGTTGAGCAGGACAAAACGAAATTTGACATACAT ACTCAACACCCACCACCATCATGATCACACTGGTGGAAATGTGGAATTGAAAGAAAAATATGGAGCAAAGGTAATTGGTT CGGGAGCTGACAAGGAAAGGATCCCTGGGATTGATATCTATTTGAATGATGGTGATAAGTGGATGTTTGCTGGCCATGAG GTGCATGTAATGGACACGCCTGGTCACACCCGAGGCCACATTAGCTTCTACTTTCCTGGATTTGGGGCAATTTTTACAGG AGACACTTTGTTTAGCTTATCATGTGGCAAGCTCTTTGAAGGAACCCCAGAACAGATGCTATCTTCTCTAAGCAAGATCA TGTCTTTGCCAGAAGCTACAAGTGTATACTGTGGACACGAATACACATTGAGTAATACAAAGTTTGCACTGTCTATCGAA CCTGAAAACAAGGAACTTCAAGCTTATGCTGCTCATGTAGCTTCCCTTAGAAATAAAGGCTTACCCACGATTCCAACCAC GCTGAAGATGGAAAAGGCTTGTAATCCATTCCTCCGTACATCCAGTGCACAAATCCGGCAATCCTTAAAGATTGCAGCCA CAGCAGATGATATAGAAGCCCTGGCTATCATACGGCAAGCAAAAGATAATTTTTAA
Protein sequence (LotjaGi3g1v0032100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRTGFSVWPDVRQLCFRKDFLYGFMRFFSTPLKTLRGGASRSLRVARFCSVANMSSSLQIELVPCLRDNYAYLLHDVDTG TVGVVDPSEAVPIIDALSRTKRNLTYILNTHHHHDHTGGNVELKEKYGAKVIGSGADKERIPGIDIYLNDGDKWMFAGHE VHVMDTPGHTRGHISFYFPGFGAIFTGDTLFSLSCGKLFEGTPEQMLSSLSKIMSLPEATSVYCGHEYTLSNTKFALSIE PENKELQAYAAHVASLRNKGLPTIPTTLKMEKACNPFLRTSSAQIRQSLKIAATADDIEALAIIRQAKDNF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 311 | 310 | 7.9E-199 | – | |
| PANTHER | 2 | 311 | 310 | 7.9E-199 | – | |
| PIRSF | 53 | 311 | 259 | 1.2E-123 | ||
| Hamap | 58 | 311 | 254 | 41.987 | ||
| Gene3D | 58 | 311 | 254 | 2.7E-103 | ||
| SUPERFAMILY | 58 | 311 | 254 | 4.2E-68 | ||
| TIGRFAM | 61 | 311 | 251 | 1.4E-94 | ||
| CDD | 63 | 226 | 164 | 5.48138E-81 | ||
| SMART | 68 | 226 | 159 | 7.5E-36 | ||
| Pfam | 78 | 226 | 149 | 6.0E-16 | ||
| Pfam | 227 | 311 | 85 | 3.7E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydroxyacylglutathione hydrolase activity | Catalysis of the reaction: (S)-(2-hydroxyacyl)glutathione + H2O = glutathione + a 2-hydroxy carboxylate. | ||
| Biological process | Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | The chemical reactions and pathways resulting in the breakdown of methylglyoxal, CH3-CO-CHO, into D-lactate via the intermediate S-lactoyl-glutathione. Glutathione is used in the first step of the pathway and then regenerated in the second step. |
Expression pattern of LotjaGi3g1v0032100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…