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LotjaGi3g1v0037600.1

Overview

Field Value
Gene ID LotjaGi3g1v0037600
Transcript ID LotjaGi3g1v0037600.1
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT1G16670.1 Protein kinase superfamily protein; Swiss-Prot: sp|C0LGG8|Y5343_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53430; TrEMBL-Plants: tr|A0A151U208|A0A151U208_CAJCA Putative LRR receptor-like serine/threonine-protein kinase family; Found in the gene: LotjaGi3g1v0037600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:4081991..4086235) extracted from Lotus japonicus Gifu genome v1.2.

CAAGTCTAGTCAATGGAAGCATAGTAGACTCACTCACACACACGCCAACGCACGCGTCCTTACACTCGCTAAGACCACCA GCACAGTGGATATTATATTTGAGCACACCCAATCATCATCTTCCCCTGTTATCATCTCAAATCTCAACCTTCTCCCTTCT TCTTCTTCTTCTTCTTCTTCTTCTCCTTGTCCCTCTCAGAACGGTTTACTCATCACTCTTGTTTCATTCTCGCTTCCACT TCCTAAAGGTTTGTTTCACCACAACCTTTGTATTTTCATGGCTTCTGTTTTCTTTCTCTTTTTGAAAATTTGTATTTGGT TTCTGTTATAGACGTTGACTTCTGATTGCATTCTTCTGTATCTATGAGTAGTTTTTTGATTTGGTGTTTTTTATTTTTAG TTTTAGTTTTAGTTTTGCTAATTTAACAATCATAATTATATTCATTTCTGGGTCAACGCCAGATTCTCCTTGTATAGAAA GTATTGATCTAGCAAGTTTAATTCGCATTGTGTAAACAGCAAGATGATTCTGAATTCTTATTTGGTGACAAAAATGGTGG AACGGAGAAAAAACACCTCCAGACTGCCTGCCGGCAGGGCGCCTGTGACATGCTGGCGAGGCCAGCAGAGGCCCACTCCT AGCAGGAGCACCAGGGATCTCTCTGAGCAGAGTTGCCCACCAACTAGGATTTTAGTTGGCGCAGGGGAATTTGAACGCTC GACCTGTGGGAGGTGCGAGTTAAACCCGGAACCTGTGGCTAGTTGTGCCGACCCATGTTGGCGATGATTCTGAATTCTGA TGTTTGTTTATCGGTGTAGTTTAGTTTAGACTTTAGGCTAGGCTTTCTTTTGTGTAAATCTCTTTTATACAAAATCCTCT TCTGTTATAATTTGACATTGGTGAAAATGTTGGAGCTATGTTATCAGTTACCATTTTGTCTGTGTCTCATTTGATATAGA ATACTATGAATGTAGTTAGTATGCTTTTGTAAGACTTGAAGTTTTTGCATCATTGCTTCAATTTACTACTTTTCTTCAAG ACCATTGACAATTGTGTATGGTTCTGTCAGGTGCTTGAAACTGGGTTCTTTTGAAGATACTGATTGCATTTGACATTAAA AGCAGCCGCATTCCGACAGTGCGTAAAATCATGACCTGTTTTTCTTTCTTACGTAGTAGGAAAGTGCCTCCTCTAGCAAG TACAAATCCTGACATTGATAAAGGTAGCTTTAAGGAATATGGTTGTAGTTGTACTATTGTATTAAGATACTTATGATATA TTATATGAACTCATTACAGTGGTTGATTTTAATTGAATGTGCTTTTGAACAGAAATTTCGGGCATCCATGTAAGAGTGTT CACCTACAAAGAACTAAAAATTGCCACTGACAATTTCAGCCCGGTTAATAAAATCGGTGAGGGTGGTTTTGGTCCTGTCT ATAAGGTAACCAAAGAACTTCCATGTATTAATTGCTTGCATCACAACATCAGTTGTCTTGAACATTATTGTTTTCCTTCC TTCATTACCAATGAAATCTGAACAAATATTATGGTGGATGATCAGGGAGTGCTAAAGGATGGGAAAGTAGGTGCTATAAA AGTTCTTTCAGCTGAATCAAAGCAAGGGGTGAAGGAATTCATGACAGAGATTAATGTGATATCAGAAATAGAGCATGAAA ATTTGGTTCAACTATATGGTTGTTGTGTGGAAGGAAATCACCGAATATTAGTCTACAATTACCATGAGAACAATAGCCTT GCACAAACGCTTCTAGGTAAATGCATCTAAATTTTTTGGTAATGTTTGCAGGCAAAGACCTTTTTTTGCATTATTTAGAA TTTTAAGGACTTGTTATGTTAATTGGTCTTCGACTCTCAACCTTATCCAAATTCTCTTTGAATAATAATTCTTTCTTCAC TTGCAGGTGGAGGTCACAGTAATATCCACTTCGATTGGCGAACGCGATCTAGGATATGCATTGGGGTTGCACGTGGACTT TCCTTTCTTCATGAGGAAGTACGACCGCATATTGTTCACAGAGATATAAAAGCCAGCAATATCCTCCTTGACAAGGACCT TACTCCTAAGATTTCAGATTTTGGTCTTGCAAAACTTATTCCAGCATATATGACTCATGTCAGCACACGTGTAGCAGGAA CAATGTAAGTATTTTAAGTTACAGTCAGTACATAATATTGAAGCATTTATTTTGTCTTAGCAGTTGAAAGAGCAGGGTAT CCTTCCAGATTTCATATTGAACTTGTAACATAGCTAGGATCTACAAATCATGTTTGAGCGTATCCTATCCTATATTGAAA CAAACCAAACCCACCCCCATTTAAATAAGGCTGCAAAGAAAGCCCGCCAAGTTCAGATAAGGGAGTGCTTCCCCCAACCA TGAAAGGGAAGACTCATTATTTTAGGTCAGCTGTTATACTGTGTTTTAATGATGACATAAGAGGTTCATTTGGTTGAGCC AGTGCTCTGCATAGATTTTTTTTCCAATAAATGCAACACAAATAAACTTAGTCTGGCTGGTACAAAATTGATTTGTCAAC TAAAACCATGAGATCATTGATGGTACTGCTAAACCGCACTTATTTGTTGTTAATGGAAACGTGAATGTTTGTTTCTTTGA GGGTGTTATTGACCTGAACGTTACATAATGAGAAAGTTGAAAGCCTAGATTTTACTATTTGCGCTGTTATCTACTTATCT CCCTTGTGTTACCAATTACTTATATCATTAACTCATTGCTGCATGTGTTATTGTAGAGGTTATTTGGCACCAGAGTATGC AGTAAGGGGGCAGCTGACACGTAAAGCAGATATTTACAGTTTTGGTGTCCTCCTTGTGGAGATAGTCAGTGGGAGATGCA ACACAAATTCACTATTACCAATAGGAGATCAATATATTCTAGAAAAGGTACACACCTTTTCTATGTTCCCTGTTATGTTG GCATATCTTTCACATGTGGAGAACACATAGTATTAGGGAAAAGATAAAATAGGTTCCTGTGCTTTAATAAGCAAGCTGCA AAGTTCTTTGAGCATTTTACATTCAATTAATGTTAAGTTGTTTTCACTGCTAATGTTGTGACTTAATAACATAGCCTTCT TTTCTATGCTTCAAGTTGAAAGGAGATAAATTATGTGATTAAAAAAATACTTACTCCTATTTTAAAACCTAAAATGATAT TTTGGAATTCTCCCTCCCCTCAGTGAACTAGACAAGGAGAGATAGCTCCCCTTCCATCCCTGGTTTGAACCAAACCTAGC AGTGTCAGTGTTGTGAGTCTTGTGATAGTTTCCTTTAGTCTAGCTCTAATTTCAGCTTTGTGCTTGCAGGCCTGGGATCT TTATCAGCAAAACGAATTGGTAATGCTAGTAGACATATCACTAAACGGGGCATTCGATCCTGAGGAGGCTTGCCGAATTC TGAAAATTGCGCTACTTTGCACTCAGGATAATCCGAAACTCCGGCCATCCATGCCTTCTGTGGTCAAGATGCTCGCCGGA GAAATGGATGTTGATGAAAGTAAGATAACAAAACCAGGCTTGATTTCAGATGTTATGGACCTTAAAATTAGACAACCGAA GGGTAATAAAGATACCAAGACTTCATCTTCATTCAATAGTTCCTCTGCATCAGACAGCCAGGGCACTATGAAGTCATTAG CTGCTTCAAGTGCTGCATCTACCTTCACTGTAAAATATGATAAAAGCATGTAAACATCATTCCTTAATGATTTACTTTTT ATTTAATTTTTTTTATTTCATTTTTTTGAATGAGTGTTATCTCATGTAAATTTGCTGACGGTTCCATATCTGTTCTAATT TAATTTTTTTTTCCCGATGGCACTAGGAAGTTTTGGGAAATTATGAACCATCTTGTAAATTTGGACCATGGTTATGAGCA AATAATAGTTTGTAGTTTGAAGGCCTTTTTCTTTTATCTTGTCTCTAGGGTGGAAATAAGGCTAGGCTTCATCAAAATAT GCTTAACCCTGAATCCAGAACTTTATCTGAAACCTGTCACATACTTATATTATATGCTACATTTTGGCCTTCTTTTCAAA ACATGAAGTGTAGCCTGAAAACTTTCTTACGAGCGACATGTAGGTGCAGGTCAAGATACGGGACTGCAATTCTCTTCTAT AAGAGGACGACGCTTTTACGTAACGACAGGGTGTAAGCACCTACTTGGCTACTTCAGGGTTGATTTCAAAACCAAAATAA ATGGC
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0037600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACCTGTTTTTCTTTCTTACGTAGTAGGAAAGTGCCTCCTCTAGCAAGTACAAATCCTGACATTGATAAAGAAATTTC GGGCATCCATGTAAGAGTGTTCACCTACAAAGAACTAAAAATTGCCACTGACAATTTCAGCCCGGTTAATAAAATCGGTG AGGGTGGTTTTGGTCCTGTCTATAAGGGAGTGCTAAAGGATGGGAAAGTAGGTGCTATAAAAGTTCTTTCAGCTGAATCA AAGCAAGGGGTGAAGGAATTCATGACAGAGATTAATGTGATATCAGAAATAGAGCATGAAAATTTGGTTCAACTATATGG TTGTTGTGTGGAAGGAAATCACCGAATATTAGTCTACAATTACCATGAGAACAATAGCCTTGCACAAACGCTTCTAGGTG GAGGTCACAGTAATATCCACTTCGATTGGCGAACGCGATCTAGGATATGCATTGGGGTTGCACGTGGACTTTCCTTTCTT CATGAGGAAGTACGACCGCATATTGTTCACAGAGATATAAAAGCCAGCAATATCCTCCTTGACAAGGACCTTACTCCTAA GATTTCAGATTTTGGTCTTGCAAAACTTATTCCAGCATATATGACTCATGTCAGCACACGTGTAGCAGGAACAATAGGTT ATTTGGCACCAGAGTATGCAGTAAGGGGGCAGCTGACACGTAAAGCAGATATTTACAGTTTTGGTGTCCTCCTTGTGGAG ATAGTCAGTGGGAGATGCAACACAAATTCACTATTACCAATAGGAGATCAATATATTCTAGAAAAGGCCTGGGATCTTTA TCAGCAAAACGAATTGGTAATGCTAGTAGACATATCACTAAACGGGGCATTCGATCCTGAGGAGGCTTGCCGAATTCTGA AAATTGCGCTACTTTGCACTCAGGATAATCCGAAACTCCGGCCATCCATGCCTTCTGTGGTCAAGATGCTCGCCGGAGAA ATGGATGTTGATGAAAGTAAGATAACAAAACCAGGCTTGATTTCAGATGTTATGGACCTTAAAATTAGACAACCGAAGGG TAATAAAGATACCAAGACTTCATCTTCATTCAATAGTTCCTCTGCATCAGACAGCCAGGGCACTATGAAGTCATTAGCTG CTTCAAGTGCTGCATCTACCTTCACTGTAAAATATGATAAAAGCATGTAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0037600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTCFSFLRSRKVPPLASTNPDIDKEISGIHVRVFTYKELKIATDNFSPVNKIGEGGFGPVYKGVLKDGKVGAIKVLSAES KQGVKEFMTEINVISEIEHENLVQLYGCCVEGNHRILVYNYHENNSLAQTLLGGGHSNIHFDWRTRSRICIGVARGLSFL HEEVRPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPAYMTHVSTRVAGTIGYLAPEYAVRGQLTRKADIYSFGVLLVE IVSGRCNTNSLLPIGDQYILEKAWDLYQQNELVMLVDISLNGAFDPEEACRILKIALLCTQDNPKLRPSMPSVVKMLAGE MDVDESKITKPGLISDVMDLKIRQPKGNKDTKTSSSFNSSSASDSQGTMKSLAASSAASTFTVKYDKSM
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27006
1 376 376 2.5E-198 –
PANTHER
PTHR27006:SF137
1 376 376 2.5E-198 –
Gene3D
G3DSA:3.30.200.20
17 121 105 3.1E-36 –
SUPERFAMILY
SSF56112
25 317 293 1.48E-83
IPR011009
SMART
SM00220
46 317 272 1.4E-32
IPR000719
ProSiteProfiles
PS50011
46 323 278 38.223
IPR000719
Pfam
PF00069
49 315 267 7.7E-46
IPR000719
CDD
cd14066
52 317 266 1.19188E-93 –
Gene3D
G3DSA:1.10.510.10
123 336 214 2.0E-56 –
ProSitePatterns
PS00108
168 180 13 -
IPR008271
MobiDBLite
mobidb-lite
344 389 46 - –
MobiDBLite
mobidb-lite
349 389 41 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0037600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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