Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0042100 |
| Transcript ID | LotjaGi3g1v0042100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ubiquitin-conjugating enzyme E2; TAIR: AT1G16890.2 ubiquitin-conjugating enzyme 36; Swiss-Prot: sp|Q9FZ48|UBC36_ARATH Ubiquitin-conjugating enzyme E2 36; TrEMBL-Plants: tr|A0A0V0HFI1|A0A0V0HFI1_SOLCH Putative ubiquitin-conjugating enzyme E2 36-like; Found in the gene: LotjaGi3g1v0042100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:4511579..4518002) extracted from Lotus japonicus Gifu genome v1.2.
TAAAGTGTGATTTTTTTATAAAAATAAAACTCACTATTAAAAAAAATGTGAAGCTAAATAAAAATAAAAGCAAAAGTGGA AAAAAAAGGTTTTTTAATTCCTACCCACTTTTCTTAACATGCTTTTGTATACAAGATAAAGACGTTTTGAGGTTCCCAAT TTTTTAATTCCATCTTTCTTCATTTTGTGCAATTGTTCTAGTGAGAGAAACTCTCTCCCTTTCTCTCTCTAAAGTAAAAA CCCTATTGCTTCCTTCGCAACCGAACCCAACCCAACAATGGCCAATAGTAACCTACCTCGAAGAATCATCAAGGTTCGTA CACATTTCCTCCTTGATTGATTCCCCAATTCCAGTTTCTCCGATCGATTTTGTTTCGTTTCTCAGAAAACCAAAAAACTT GAATTTTTTTGGTCATGGTTTTCTGGGTCTTACTTTTTAGCTTCAATCACGTTGCTAAAGACCATGTTCTGAGTAATTAA CTGCTCATTCAATTTTGGGTCGATCTCAAAATTGCATCTTTTCCAATTTATCTTGCTCAACTCAGCTGAAACCCCTTTTG CTATTGATCTCAGTTGGAAGTGATTTGTATGTTGGTTTTTTCTAAGTTTTGATCTTTGTGAATGTTTTGATGACCCTTTT GCTTGTATATGAACAGGAAACGCAGCGTCTGCTCAGTGAGCCAGGTAACTACTACTAATTAGCACTTTTTCCTTTGGTGC TTTATTTGGTGTATGAAAACTGCCCCATATGCATACCCTCGGTTGAATTCGCGGCGCTTGTCCATTTATTTTTGGGTTTT ATTTTGATTTTTCTAAGAGATACTTGGTGATTTAGTAATCCAGATTATGAAGCAAGGGTTGTTTTCTGTTTTTAATCTGC TGATTACTTGTTATGATGATCTGCTGATGCAGCACCTGGAATTAGTGCTTCCCCCTCCGAGGAGAATATGCGATATTTCA ATGTGATGATCCTCGGACCGACCCAGTCACCTTATGAAGGTAGTATTGAGTTCAATAGCATGATCATGTTACCTTAAATT GCTTCTAAATATATTGTCGGTTCAGTTGTGTCCGATTAAACAAATTTTAGCGATAATGTGATATAAATATCCATTTGATT TGTGTGTTCTGGAACAAGGTTAAACATGAAGAATTCCAGTGAAGATTTATGCTTTGTGTCTGTAGTCAAATGTATTTTGG GAATGAATAGTGGCATTAAAGTTTCATTGTATTGCTTTTTATTACGAAGCTGTATGCTTTATTCTTGAAGTGTTGTCAAG TAGCGGTTGTAGCGGCGCTATAGCGTAGCGCTCTGAGGCTCACCGCTATTTGCGCTATGAGGACTTGAAATAGTGGATTT TTGGCTTTCTGCTATTTTCCGCGATTAACAATACTAAATTGTTGATTGTCTAAGTGTTTGTGTGGTCAAGCATTTCAAAC TTTATTTTGGATGATTTTGATTTTGTAAAATTGATTTAGGTTAAAATAAATGAGTTCAGGAAGGATATAAATGAAAAGCT GGAGATAGGCCTTGGAAGCATATGGCTTTTGTCTAAGTAGAAGTAGAATAAAATATTTGGAATTCAAGTTTAGCAATGGA CACACAGGCCTTAAGTTAAAGGTGCAGATGATTGGAGAACTTAAAATACCTAAAGTTTTACATTTCAAGTATCTTGGGTC CAGATGCAATATGGCGGAGATAAAGGGAGATATAAACCATTGGATCCCAGCAAGGTGGACAATATGGAGGAGAGCATAAG ATGTGATTTGTGAGAGAAAAATAGCACTCGGACTTGATTTTTTTTTTACCGCACAATGAAGACCTTCACTATTGTCTGGA ACTGAATGTTGGGGGTGGTAAGTTTGATATAGCAGGGATTAGATTGTTAAGATGGATGAATGGTGATAGAAGACATGATA GGATTAGAAACACAATCATTGGACAGAAGGTTGGGGTAGCTCTATTTGCAGAAAAGATGGTAAAGTCCTGTTTTAGGTGG TTTGGACGTATGGAGAAGAGATTAGATTGTTGAAGCACTTATAATGATGGTTGACCAGATTGGAGTCCAATAGTTGGGGG TACAAAGGGACCTAGGATGACTGTGACAAATCATTCGAAAGGATTTAGAGGTTAATAATATATCTGAGGACCCACCGCTA TCCGCTATTTTCTGCTATTCTCCGCTATGCTCTGCTTTGAAGGCTCAAAATAGAGGATTTTTGGCTTTCCGCTATTTTCC ATGATCCGTGATTAGCAATACTGTGGCATATTGATATATGTAGTTGACCCCATCTAGTAGGGAAAGTCTTAGTGTTTTCT TGTTGATTTTATTTAGCTCAAAATGAATTTGAAGTGAATTTATATTATAGACACCTTTATCAAATAGGTAATTTATTTGT GAAATTAATATTTTCTCTCTATTATTCCAAAATTCAAACCCCCCAATGTAAAGTAAATGCTGCTTCTCTTTAAACCCCTG TTCATGGACAAACTTGATCCGAAGAAAAAATAGCCATTCAAGATTTGAACCATAAAAACCAGTCTGAAGGTGTCAAACAT GGGTTTTGGTTTGGCATTTGCAGATTATCAATCTTCTTATGAACCTGTTAGATAGAAGGTTGCCTGTAGTTTTCTGGGTG TACAATGTGTGGCTTTGACATGAAATGGAGGAGTAGTTTATATGGGAATGCTCATGCATAATAGTAACTTCACTCTCGTT CATCACTATCTGATCTATGTAGGATCACTTTCATTAGATTAAATAGGAATTCTTTGTTTTCCTTTTTTACTAAAATATTG TGTCGACCAAAATAGATTAAATGATATTCGTGCTTACATGTGGTGTTTGTGTTATCAATTCCGCAAAAGAACTTTAACTT AATAATTGGACAAGCTTATTTTCTCCTCTACATCATAATAACTAGTTACTACTATATGCTCATGGTAATTTTGCTCCGTT TGGAATCTCAAAAAGCAATTCTTTTGAATTTGTTAGTGGAGGTTTAACGTAGCATTTAGAATGAGGTTTGCTTGCCTACC TGCATCTCTTGATTATTAGATATCTTTAAAGGGTTATCTAGCTACAAGATTTAGAACCTTTGGTTTTTATGGGTATCATC ACTTTTATTCATTCTTTATTGTTACGCTTGATTACTTTCAAAGGATCTTGATTGTCTTATCCTTGTTCCCTTTGAAATTA CATTAAGGTAAAATATTACAACTTTGTGGATTACCTGTTGAGAGATGGTAATTTTCTTTAAATGGCCTAGATTCTGTATA TGGTTGGTTATAGTCGTAATATTTAAATAAAGGATTGAAGTTTTCATTTTGCATGGTGAGCCTTACATTGAAATGCTTTC TTCATTTTGATGCAAGTTCTTTCTTTCTTGATTCTGTGTTTGTAAGAGCAGGAAGGAATGGGTTATTGTGTACTGTAAAA TTTCAAAATCATTGATTGTGATGATAGCTTCAAACTTGTAATTCGATCTACAGATATTAACCCATTGTGCTTCTACTAAT ATACTTTTTTCTTGTCTGTATTACTAGGAGGAGTTTTTAAGTTAGAACTATTTTTGCCAGAAGAATATCCAATGGCTGCT CCAAAGGTACCACAGTTTTCTTTTGGTGTTAAGTTTTTGCTGATTTCTTATACACCAAAAAAATAACTAATTGTGAAACA TTCATAGGTGTATGGTTGCTTATAGTTCCATATGTAGTAAATCTGTTTTTCTTTTTAACTCTTGGTATTTGAAATCTAAT CGGATAGGACCCCTATGCAATTAATTGAATAGGCTTCTGCTCTCCTGTCTTCTCCTGATTGCCTTCCAAACTGACACTGT TGGAACTTGTAGCTGATATAAATGACTAAATATAATGTCCTTTTCATTTCCTATTAAATTGAAATCTTAACTGTACAAGC TGGGGTGTCATACTGTTGAACTTTCCTATACGTTCTGTGATGCTGTTGGATGTTGCAGGATTTCTTGAGGGGTCGTTTGA ACTGGGAGGGGGGTATTTGGAGGGAAAGGATTGGGGGTGGGGGGGCATAGTTTTTTATTTTTAAAAAATACTATCAAATT TGTTAATTTTTAATAATAAAAGCTATGGAATGATAAATTAGTATAAACATAATATATAAATACTCATCACATATTTATTA CAAAAATATTATATTTCTTCTAACTTAAAGATGAAAATTAAGCCCCCCCTCCATTTCCCTCCAACATCCCCCTTTCCAAA CAACCCCTTAGCCCCTTAGGATTTAGGACTACGCTACTAACTAGCAAATTCTGGCTATTACTAATTGAGTTTAAGGAAGG CGTGTTTCTACAGCTCTTCGGAGTTCTGTCTAACTGATTGCGATTTCAATTGTCCAAGGATCTTGAGTCTCTTTCTCTTT CAGGAATATTGTGGTTCTATCTCCAATTTGTGTGATTGTTTGGTTTCCTCATATTTTATTGGCTAATCAAGGTTTGATAT CCTTTTAATGGATCTAAATGCACATTTCTTTTTACAGGTCAGATTTCTAACAAAAATATATCATCCAAACATTGATAAGG TGAGTTCAGCTTTCCCGAAGTTCTCAGTTCTTCAGTAGTTATTTTCCTCTTACAAGCTCTTGTTTAATATAGCTTGGCAG GATATGTCTCGATATCCTTAAAGATAAGTGGAGTCCAGCCCTTCAGATACGCACTGTTCTTTTGAGGTACTTATTTTCTT TTATGCTACTGGATGTCCATATTTTCTTGGACCTATTTATTTCCTGAGGAGATGGGACAATGGTCATAGTTGTTTCGGTG TTACAGTCTTGACATTCACATGCTAAAATGTTATTTCCCCAAAACATTTGATGGCACATATATAGTGTCAAATATACAGG TCTGTTATACGAATGTTTTTAACACTACTGTGATTGTTCTGCTAGCACGAAAGAATTTTTCATTTTGTTTGGTAGAATAT GGAAATTTCGAACTAAGAAGTAAGAATCATTGGTCGTCTTTAGACTTTTGGCTCATTCAGTGCCTGACTAGTTATTTTTA ATGGGGGGGGGGGTTATGTTCCACCTAGTGAGGCCACGCAAAATGTCTCACAGTGATGGGAATTGCTGCAGGGCAAGTAA ATGGAACTATATAATTAATCTTCTTAGTTTGAGAGAGCATTGTGTACTGATAATGAGTTTTTTTTTGTCACTTTATAGCA TTCAAGCACTTCTGAGTGCACCAAACCCTGATGATCCACTTTCTGAGAACATTGCCAAGCATTGGAAGTCTAATGAGGTC GAGGCTGTTGAAACAGGTATGTTTTCTTCGTATGATTTGCATATAAAAAAATAATCAGTATTGAATGCAACATTTACATT CTCTTATTGACTTCAATGTGGCATTGGAATCTGCAGCGAAGGAATGGACCAGATTATATGCTAGTGGCGCCTGATGATGT TGGGTTCAAACTTTTGTCCCCAAAATAACAATGGTGATGGTCAAATTGAATTGGATATCTGGAGGAATCGTTAATGTTTC TTATAGCTTCCAGTTACCTGATATTTTCTTCTCTTGGAAGCTGTCTTATATTGGAACTAGTATGAATATGTGTTGGTCAT TTACCTGTCTTACATTTTAGAACCTGCTTCATCTTAAACTGCCAAGTAATTTGGGATTCTCAAACATCAAAGTCTAAAAT CTGTGAATAAGTTTGTTTTCATTTTGAAGATTTGCTGCAAGATGTGTTTGGTTATACACTTGTATGATTCAACAGAATTT TGACTAAAACGTGTAGACATTTGGAGCTGGGCAAACAGTTATTTCAATAAATCAGGTCCTATAATTTTTCGAAACTCACT CAAGCCTCTTCTAAATTGTCCATAGAGTCACTCAAGACATTGAACTTGTCATTATTTTTTCAAAATTTGAAAAATATAGG AAAATGCAATTAATGTAAAAAGTTTATGCACTAAATTTGAAGTCATAAGTTTTAGTCTACTAGGTCAATTTCAATATACT TCAAACAACAAAAATTAAAATTTATCACCAAGCAATATGTGAAACATTAGCTATTTAAAATGTAAAAGTAGGCTGTAATA TGCGGATTAAGGTTTTTCTTTTGATCTTTAAATTATTATATAGTTTTTTTAATAAAGTAGTTTAACTTATTTTGCTAAAA GCATTATTGAATTTACATTTATGTTGTGCGGAGCAAAGACACCGTGGGGTAGGGAATTGATTCCTCTCACCATCTCCAAA TTTGTCTAAAAAAGTTTCTACTTTATCTTGCAAGGAAAAATTCCTAAAATGTATAGTCTTGTGGGGATTCCTCATAAAAA ATGTAATCCCCACTCATATGATATGATATGCAAACCTAGTCTCAGCCACCCACAACGGCTATATTTCGTGTGTAGTTTCA GTATGCCAATTGATGATGTTGCCG
CDS sequence (LotjaGi3g1v0042100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAATAGTAACCTACCTCGAAGAATCATCAAGGAAACGCAGCGTCTGCTCAGTGAGCCAGCACCTGGAATTAGTGC TTCCCCCTCCGAGGAGAATATGCGATATTTCAATGTGATGATCCTCGGACCGACCCAGTCACCTTATGAAGGAGGAGTTT TTAAGTTAGAACTATTTTTGCCAGAAGAATATCCAATGGCTGCTCCAAAGGTCAGATTTCTAACAAAAATATATCATCCA AACATTGATAAGCTTGGCAGGATATGTCTCGATATCCTTAAAGATAAGTGGAGTCCAGCCCTTCAGATACGCACTGTTCT TTTGAGCATTCAAGCACTTCTGAGTGCACCAAACCCTGATGATCCACTTTCTGAGAACATTGCCAAGCATTGGAAGTCTA ATGAGGTCGAGGCTGTTGAAACAGCGAAGGAATGGACCAGATTATATGCTAGTGGCGCCTGA
Protein sequence (LotjaGi3g1v0042100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHP NIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEVEAVETAKEWTRLYASGA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 152 | 152 | 4.1E-67 | ||
| PANTHER | 2 | 151 | 150 | 1.5E-102 | – | |
| PANTHER | 2 | 151 | 150 | 1.5E-102 | – | |
| CDD | 7 | 146 | 140 | 8.81666E-65 | ||
| SUPERFAMILY | 7 | 151 | 145 | 2.88E-55 | ||
| SMART | 8 | 151 | 144 | 1.6E-68 | – | |
| ProSiteProfiles | 8 | 140 | 133 | 41.848 | ||
| Pfam | 9 | 145 | 137 | 1.5E-48 | ||
| ProSitePatterns | 78 | 93 | 16 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0042100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…