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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0042500 |
| Transcript ID | LotjaGi3g1v0042500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G16670.1 Protein kinase superfamily protein; Swiss-Prot: sp|C0LGH3|Y5614_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56140; TrEMBL-Plants: tr|I1KDM2|I1KDM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0042500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:4546940..4550284) extracted from Lotus japonicus Gifu genome v1.2.
TCACTTTTATTATTAGCCAATAGGAGTTTGCACTTTATGAAAATAATATATATGTGTATCAATGGCAGAAGTTCCTGCTC CTGCTGCAGCTGTGGCTATTTAGATCTATCACATGATCCAAATTTGATCCTTAATTACCTGTTTTACAGCACCAAGTTTG ATCCACTGAAGTACCAGAGTTACTATGAAGGCTTGTTGCTCTTATCTTTTCAGAAGAAAAGAGTCTTCCTCAGCCACACG ACTCGAAGGAGTTGATATAGGTAAAAAACTCCTGAGCAATATTATTGTACTTTATGGTAGTGTATAAACTTTCAAGCAGT GTTCCATGTATGATCTTCTGCTTTATGAAATTATGTCTTCAATTGAATTGTTCTAAGACTTGGTCATTGTTGGTGTTTCT ATAAATTAGACTTGGTCCAATAATCCCATTTGATTGTATACATGAATCATCCACATGAATTTTTTTCTTAATTGATTGAA CTTTTCTTGTGCAGTGTTTTTATAATTTGCAGAAATGTCTGAAACATGTTCACAATGTTCTGGTTGAATCAAGCTAATAT GTCTCTGCTGCACAGATATTTCAGATGTTCAGAACATCAAATTCTACACTTACAAAGAATTGCGAATTGCCTCTGAAGGT TTTAGTCCTGCAAACAAGATAGGGCAGGGAGGTTTTGGTTCAGTATACAAGGTAATTGCAATAGTATGGTACCATCTAAA ATTCCTAGCCCTTATTGAATCTGGTTGTGCATCTTTGTGCATTTCATTTTCTCTGACTGATAACTTCATCAATTGTACAG GGAAAGCTAAGAGATGATTCCTTGGTTGCTATAAAGGTTTTGTCAGCTGAATCAAGACAAGGGGTGAATGAGTTCTTGAC AGAAATTAAGGTGATTAGTAGTGTAGAGCATGAGAATCTGGTAAAATTGTATGGATGTTGTGTGGAAGATAATCACAGGA TCTTGGTATATGGCTATCTTGAGAATAACAGCCTAGCACAAACACTTCTTGGTAAGTGAGTTGCTGTCAAGTAACATGAA TGTACCTAAACTATTCTAATAATGAATTTGGTTTTGATCAAGCACAGTGGCATCGAGTGATTCATGTAGCCGACCTAAGG TTTTTATTGTTGTTGTTGTTGATTTTGTAGGTACAGGCCATAGTAGCATCCAATTCAGTTGGCGTGTAAGGCGGAACATA TGCATAGGTGTCGCCCGGGGCCTCGCATTCCTTCATGAGGAGGTTAGACCACATATCATTCACAGAGACATAAAAGCAAG CAATGTACTACTTGACAAAGACCTCCAACCCAAAATTTCAGATTTTGGCCTTGCAAAGCTTATTCCACCAAACCTTACCC ATATTAGTACCCGGGTTGCTGGAACAGTGTAAGTTCACTGCTCTGTCTTCTGTTGTTGAAGAATTAACCCGTTTGGATGT GGACAAAAAACACTTATTATTTCTTATCCAGTGTTTTTTTAGTAGGTAAGCTCCAATAAGTGCTTTTTAATCCGTTCTGT TAATCCGTATCAAAACGGGCTCAATGTTTAATTAGATTAGACCATGAAATTTCAGGTTTTGGAATTTTCAAGCTTATAGC AATTTTTTCCTACATTTTCTTCTAATGATGTGGCTGTTTGGTTTTACAGTGGTTATGTGGCACCTGAGTATGCCATACGA AGTAAAGTGACAAGAAAATCAGATATTTATAGTTTTGGAGTTCTACTACTAGAAATTGTTAGTGGGAGGCCTAACACAAA CAAAAGATTACCTGTTGAAGAACAATATCTTCTCACAAGGGTAATGACTTTTTCTTTTTGCAAATATGGAGTGGCAACAA GAGCACTTGGAATCACTCTATATGGTTTCAAGAATTTGCATGTATATCCCTTCTGCTATATATCATGAATTAGTGCATGT TTGTGTACGCAGTAGAAAAATACGGTGGAGCTAAAATCACGGTTGACAAAAGCAACTTCCTTTAGCTTTTGTGGCAGTCA TCGTGATTTTGACTTCACTGCGGCTTTCCACCATGCATCCATACGCACACTAATTGTTAATGAATTCAAGGTTTCAATGC GTCTTGCAGGCATGGGATTTGTATGAGAGAGGGGAGCTACAAAGTTTGGTGGATCCATTTCTAGAGGGAGACTTCAATAT GGATGAGGCTGTTAGGTTTTGTAAGATTTCTCTTCTTTGCACACAGGATTCTCCTCAGAATCGGCCTTCTATGTCCACAG TGCTTGGCATGCTTAGGGGTAGAAGGGAAGTGAATGAGGAGAATGTGACCAAACCAGGTATGATATTTGAATTTGTGCAA GCCATGGATGAAGGGAAACAAAAATTCAAGACTGAAGTGGAAAATAGCAGTTCAGGGAAGCAAGATGATTCATCTTCATC AGAAACTATGACCTCTTTTGCTACCATGACTTTCACTGCAATTTATGATCGGAGCAATTGATTTGAATGTTGATGGCTAA ACTTGCATACGCCCCTTTGTGTTACAAAACAGTTTGAAGTTTTGTTTTATAACTTCTTTTCATACTACATAAATCACTTT TGGAATCCTTCTGTAATATAAAGACAGGCATAATTTTTTGTAATATAGGATTGTCAGTCTAGGCTGTATATTGATATACA ACAATATTTTGAATCAGTTGCTTGTTTATTTTTGGCTTGGTTGTTCATGGTTCTTGTGCTTTGCTAAAGAATAATGCTCT ACTTCCATCACCCCCAGTCCCCCACCACCACCACCACCTACACGGATTTGGATTCCTTAGAGTCAGTAAAATCTCGCATT CACGCAGTTTGAGCTGTCTGATTTCAATCCGACAATTCACATTTTAAGTCGTAATAAGTAATTTCGAATAGTAACTCTAA ATGTGAGCCCTCTCATTTTTAATCAAACGACTTAAAATGCTTGGATGCGGGATTTCGCCGACCGGGAAAGAATCCAAATC CCCACTTACACACACCCTGCCCTCCTAAATATAAACTCACAGCAGCTTCATCACTAGGCTACTGATGGGTCAGCTTTGGA CCTCCATGATAAATGAACATTCTTAGCTTGAATCTCTGGAGCATGCAAATTGCAATCCTCTCAAGAATCTTCTCAACTTA GAGTTGCTTTTAATTCTTTGGTGACTTATTGTGAAACTAAACTTTCTCTGACCATGTTGGATTTTCGAGTTTAATATTCA ATTCTGACTTGGCTGGTATGTTATCAACTTTTGTATAATGGAACTATTTTATTCCAGTTAATGGAAACTGAATCGTTTCT ATTCTGCTGGAGAGCGATGGAGAGAGGAGTTGGCAGGAGAGAATTTGAAATCTAGGACTAGGATA
CDS sequence (LotjaGi3g1v0042500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGCTTGTTGCTCTTATCTTTTCAGAAGAAAAGAGTCTTCCTCAGCCACACGACTCGAAGGAGTTGATATAGATAT TTCAGATGTTCAGAACATCAAATTCTACACTTACAAAGAATTGCGAATTGCCTCTGAAGGTTTTAGTCCTGCAAACAAGA TAGGGCAGGGAGGTTTTGGTTCAGTATACAAGGGAAAGCTAAGAGATGATTCCTTGGTTGCTATAAAGGTTTTGTCAGCT GAATCAAGACAAGGGGTGAATGAGTTCTTGACAGAAATTAAGGTGATTAGTAGTGTAGAGCATGAGAATCTGGTAAAATT GTATGGATGTTGTGTGGAAGATAATCACAGGATCTTGGTATATGGCTATCTTGAGAATAACAGCCTAGCACAAACACTTC TTGGTACAGGCCATAGTAGCATCCAATTCAGTTGGCGTGTAAGGCGGAACATATGCATAGGTGTCGCCCGGGGCCTCGCA TTCCTTCATGAGGAGGTTAGACCACATATCATTCACAGAGACATAAAAGCAAGCAATGTACTACTTGACAAAGACCTCCA ACCCAAAATTTCAGATTTTGGCCTTGCAAAGCTTATTCCACCAAACCTTACCCATATTAGTACCCGGGTTGCTGGAACAG TTGGTTATGTGGCACCTGAGTATGCCATACGAAGTAAAGTGACAAGAAAATCAGATATTTATAGTTTTGGAGTTCTACTA CTAGAAATTGTTAGTGGGAGGCCTAACACAAACAAAAGATTACCTGTTGAAGAACAATATCTTCTCACAAGGGCATGGGA TTTGTATGAGAGAGGGGAGCTACAAAGTTTGGTGGATCCATTTCTAGAGGGAGACTTCAATATGGATGAGGCTGTTAGGT TTTGTAAGATTTCTCTTCTTTGCACACAGGATTCTCCTCAGAATCGGCCTTCTATGTCCACAGTGCTTGGCATGCTTAGG GGTAGAAGGGAAGTGAATGAGGAGAATGTGACCAAACCAGGTATGATATTTGAATTTGTGCAAGCCATGGATGAAGGGAA ACAAAAATTCAAGACTGAAGTGGAAAATAGCAGTTCAGGGAAGCAAGATGATTCATCTTCATCAGAAACTATGACCTCTT TTGCTACCATGACTTTCACTGCAATTTATGATCGGAGCAATTGA
Protein sequence (LotjaGi3g1v0042500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKACCSYLFRRKESSSATRLEGVDIDISDVQNIKFYTYKELRIASEGFSPANKIGQGGFGSVYKGKLRDDSLVAIKVLSA ESRQGVNEFLTEIKVISSVEHENLVKLYGCCVEDNHRILVYGYLENNSLAQTLLGTGHSSIQFSWRVRRNICIGVARGLA FLHEEVRPHIIHRDIKASNVLLDKDLQPKISDFGLAKLIPPNLTHISTRVAGTVGYVAPEYAIRSKVTRKSDIYSFGVLL LEIVSGRPNTNKRLPVEEQYLLTRAWDLYERGELQSLVDPFLEGDFNMDEAVRFCKISLLCTQDSPQNRPSMSTVLGMLR GRREVNEENVTKPGMIFEFVQAMDEGKQKFKTEVENSSSGKQDDSSSSETMTSFATMTFTAIYDRSN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 383 | 376 | 2.3E-213 | – | |
| PANTHER | 8 | 383 | 376 | 2.3E-213 | – | |
| Gene3D | 21 | 123 | 103 | 1.3E-33 | – | |
| SUPERFAMILY | 31 | 332 | 302 | 1.75E-82 | ||
| ProSiteProfiles | 48 | 325 | 278 | 39.015 | ||
| SMART | 48 | 312 | 265 | 3.4E-37 | ||
| Pfam | 51 | 253 | 203 | 3.0E-48 | ||
| ProSitePatterns | 54 | 76 | 23 | - | ||
| CDD | 54 | 319 | 266 | 1.22214E-98 | – | |
| Gene3D | 124 | 344 | 221 | 1.1E-59 | – | |
| ProSitePatterns | 170 | 182 | 13 | - | ||
| MobiDBLite | 350 | 370 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0042500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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