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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0043000 |
| Transcript ID | LotjaGi3g1v0043000.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trichome birefringence-like protein; TAIR: AT1G73140.1 trichome birefringence-like protein (DUF828); Swiss-Prot: sp|Q1PFD9|TBL31_ARATH Protein trichome birefringence-like 31; TrEMBL-Plants: tr|A0A072TPV7|A0A072TPV7_MEDTR Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein; Found in the gene: LotjaGi3g1v0043000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:4568065..4575638) extracted from Lotus japonicus Gifu genome v1.2.
CTTTAAAGTGCTTCAAACTCAAGCAACCCACAAAATGAAGCACTTGACAATGTCCCTAACATAATTTACAACACTAGCAG TTTTCAATTCCTTCAACAAAGCCATGTCAATGCTTTCTTTCAAGCCTTTCCTTGATCGTCGGGTCCAATCGTTCTTCCCA ATTGTATTGTATTCAACTCTGATCTTAGGAGCTGCAAGGTTAGTCCTAGATAGTTTGAAGAGCAGCAATAGCCCTGTTTT CAAGCTCTATGGCATGTCACATGGTGGAAGGAATAGATTACCAGTTGTAGTGTTGCCAGAGGATCGCATTGAGGAAGATT GCAATGTGTTTGAAGGGACATGGGTGTGGGACAATGTGTCCTATCCTCTTTATGAAGAAGAGAGTTGCCCTTACTTGGTC AAGCAGACTACTTGTAAGAAGAATGGAAGGCCTGATTCTTACTATAGGAATTGGAGGTGGCAGCCTCATGGATGCAACCT TCCAAGGTAACTAACTAACCCTTTTTTACTAGTCTTTTTGGTTTGAGAAAGGTGTTCTGTTTTGATTCAGTTTCACTTTT CATTAGCAAAACGTATATTTTCTTTTACTTTGTTGCCTATTTTCAAAAGTGATATAAGATTAACAAGATAGTTTAAGCAC TTTAAAGTGTGTGTTTGTATTTATGTTCAAGTTGGTCAAAAACACGTTCACTTCTATTACACAAGAAGCATGGATTAGCC AAAAGCATATTCAAACTGTCTTTGAATGTGCGTCGACAGAAATATAATGTCTTTGGAAACCCCTTAGATTTCCACAATGG GGAGAGAGGTGACTCTAGGCTGGAAGCTGAGTTCTAAATTGCAGTTAAAGGTGGGTTAATGAGCCACAATTGCAGTTTGG CGGCACAATTGCAGTTGCAAACTATAATTTAAAATCTTGATTCCGGGAGAATCTAATCAAAACTATTTTGGGAATTGATT TTAATGTCACTCCTATAAATATTCATGTCATCCTCTTCCGCGCTTTTAAAGTGTGAAATGTATAAGTTGTATATCGCACT TTTAAGTGCGGTGTGTAATTGATTCCCGCACTTATAAGTGTGCGGTAAAATTGGGTGGCAAGAAAACAAATAGGCTGTGA CATCAAAATCAATTCCCAATCACTTTTGTGGGAAAAATAAATAATTTAAAAGGTTTACCTGAAACAAAACATGCAATTCA TATTATCTTCTCTTATAGTGCTATAAGAAGCATGAAGATGGAGGCATGGAGCCATTGCATGTATCTAGAGTAACAAGCAA TGACTCCTCACAAACTAATATATTTCCTTGATTAAGACATGGATTTCAAACTTTGAGCATCACAAGATTGTTCTTTGCTT CAGATTTGACCCTTTGAAGTTGCTGCACGTGTTGAGGAACAAACGGATGATGTTCATTGGAGACTCATTACAAAGAGGCC AATTTGAGTCTATGGTCTGTTTGGTACAATCTGTAATTCCTGAAGGAAAGAAATCCCTCAAAAGAATTCCACCTATGAAA ATCTTCAAAGCTGAGGTTTATCAACTAGTGTCTTTCAACTTCCTAAATACCAAGCTTATATACACAACTTTTATTACATC TTACATTGCTTCTAAAAATTTGTAAATATGTTTTTGGTCGCTGTATTTTCAATAATACAGGGATGAAAACAAATATACAT TTAAGCATTTGTTTAATGATGAAACTGTTATGAAACCCAAATTTCTGATATTTTCTGTAGTTTTTTTCTTATTCCAGGAG TTCAATGCATCAATTGAATACTACTGGGCTCCATTCATCGTAGAATCCATTTCAGATCATGCAACAAATCATACAGTACA TAAACGAATGGTGAGCCTGGACTCCATTGCTAACCATGGAAAACATTGGCAAGGAGTGGACATTTTGGTGTTCGAAAGTT ATGTTTGGTGGATGCACAAGCCTTTCATCAATGCTACGTGTGTATCTAAACTCTTCTATAGTTGAATGTTCATAAATAGC ACATTAGCACTAGTTTTATTAAATTATTTATTCCTTTTCATTGAATTGGTCTTAAACATCTTTTGTTCCAGATATGGATC GCCACACCATGTCAAAGAATATAATGTCACCACAGCATACAGATTGGCTTTGGATACATGGGCAAATTGGTTAGAATCAA ACATCAAACCACTTACTCAGAAGGTCTTTTTCATGAGTATGTCTCCAACACATCTGTGGTAAGTGATCACAATCACAATC TTTTTTCTGCCAAAATTTGCTCAGGTTAATGCATCTTTAGAACCACTGCAAAGTGGAGCTTAACACACTTCACTTTTTTC ATAGTAAGATGTTGGGCAAAATCATGAAAGAAGACTTGTAACTACACAACTTTTTAAGACTAGTTATTTTGAAACCGAGA ATTGAACAAAAAATAGTTGAGCAAATATGGCTAAGTCCTTATTTGAATACTGTTTTTTAAAATCAGGAGAAGAAAAAATT CATTTTTGTATGAACAATTTTCAAAAACTGTTTCTAAAATCAGTTCTTATTTTCAGTTTTAAAGGTCTTTCAGCTTTGAA AAACATGTCAATTAAATTTTATTTTATTATTCTTTTTTTTTCTAAAGCAGAAGATTTATTGAAATAGATCAAAGTCGAGA TATAGGACCTCCCAACAAAGAACTCACAAAACAAGAAAGCGATGAAAAAAAAGTGAAGAATGCCGAAAACATAAGAGAAA ATGCTACAAAATAAGCCATGATACGACCAAAAACCTACTAAAAGGACATCGCCCAAGACTAGGAAAACGAAAACAGCACA CACCCTCGATCAACAAAATCAAAAGAGCCTTAACCATCTCCATATCTCTCCGGCTGAGAAGATTTAAGCTTCAAATGTTT TTGAAAACAGTTTTAAAATTCAAAAAACTCTTAAGGGAATCAAACAAGTTCTAACTCTTTCCAGCTCATTTTTTCCTTAA ATTGTGTTTGGACCGTTCTAAAAAATTACAGCTGATTTTGTTGTTCAGGAGCTGGGAATGGAAGCCAGGAAGTGATGAAA ATTGCTTCAATGAGTCATACCCTATTCAAGGTCCATATTGGGGCACAGGCTCAAATCTTGAGATAATGAAGATACTAAAT GATGTGCTACAAGAACTGAAAATAGATGTCACCTTGCTGAACATAACCCAACTATCAGAGTACAGACAAGATGCTCACAC ATCAGTTTATGGGGAGAGAAAAGGCAAGCTCTTGACAAAAGAACAGAGAGCCAATCCAAAGTCCTTTGCTGATTGCATTC ATTGGTGCTTACCTGGAGTCCCTGATGCATGGAATGAAATCCTATATGCATATCTTTTTAAGAATTATAAAAACCTCTCT TGACATGACAGAAAGCACAAGCATCTCTCAGATGGTGGGCACATTCACAATTTTTCATCAGTTCAATCCATTCTATTTTA GTATTTACAAAATTCAGCACTTTTTGAAACTCTGACAAATAGATTAACCAAGAGTCTAGTTGGAGTCCGACCAAAGAGCA TTTATTGAAGTTTATCTAGTAGGAAAAGCACAACATAAACTCCAATAAGTGCTCATTGGTCAGCATACAATCATTGATCT GCATACAAACGGGTTCTAACTTGTAAGAAATACTATTTGTATCAACATGAAGTAATACTAATTGTATACTGAGGAAAACT TTGCAAGTATGCAGCTTGAGAAAGAAATCAGAAAATCGTCACATTTTCATGAAAACAAGCGTCATCAACAATTATGTGCG TTCTTCGTAGAAATATAAACAATACAATTTTCAGCAAGAATTTCCATGCCACCTTCAAAATGTACATTTGCAAAATAAGG GAGCCAATGAAATTGGTCAATCATTATATATATGCAGCCAAATTGTATTTACAGCAGCTCCCACTCAGTTTCAGAAGCTT GCTGCTCTTGCAACATCTTTGAGTCAAAATGCATAGATCTAAATGGGAAGAGAGTTCGCGATGAACCTTGACTGTGCTCT GTATCAGTGTCTCCATACCATATTGCTATTTGTTCATACTCCTTCGCTAACCTCCTCTTTGGAGCAAATGCATCCTGAAT TCTTTTCTGTTGGACAAAAGAAGATAGTTATGGCACATGCAAGATTTCTTGATTCTCCTTAACGCATAAATTATGTCACA AAATAAATTTCATTTTTTTCTTTTCCTTTACCTTTCTTCACATAAAATACAAGTTATCAAGATAGATATTTCAAAGCAAT TAGATTTCTTCTATAATACAAAATAACTATCTTTTTTGGATCAGGACCAGTGGTGATAGATGGTAATTTCAAATTCTCCA AGCATAAAACATAAAATTACCACATGTGGGGGTGTGTGTCTGTGTCTACATATATACATATACACGCACACATATAGCAA CTTCAGTAATTAGTTTATCCATTGAAAAGGTGATTAGAGAAGACTAAGATAATACCTTGTATGATCTAAAGCTTAATCAC TAGTTTACCAATTAAAAAAATTATAAGAGATGCTACCTTGTATGATCTAAGCTTTTGGGCTCTGCATGAGACTGCGTAGA GTTCACTATCATCCACAAATACACAACTTCCTTCAAGATTCACATCATCATTCAAATGAATGTCATCCATGCAGAATTCA AGAGAACTGATCAGTGATTCATCTGACAAAACAAAAGCCATATCAGATAGGTGACAGATGATAATACCCAAACGGAACTG TAAACATCATTAATTATAAGTTCTCTAAGTAAAGTTTTGGTTCCTTTTTGTCATTTGTGAATTTGTTCTCACTTTTTGTG AGGGATCAATTTCTTACTGTATCTCCATTACAATTCAATTAGAAAAAAGTAAAAGCGCCCAATTCCCCTGAAGTGATTTT GTGCTTTAATAATGAAATAAGTAAAGAGAAGTTATCATAAATGAAAATTTAAGATACTAACCATTTGATTCCATTGATAG ACAGCTGCCTGTAGAAACAAGTACATCCTGGGATTCCATGATCTGACCAGTTACATGGGAGGATTCACAACATACATTTA CCCTGGAACTATCTGAAATAGACCAAGATCCATCACCTGAATCGTTTTTGCAGGATTCAGTTTCAAAGCAGCTTTCTGGT GATTTTGAATATGGACTTTCAGAAATTATGGAACTATCAAAGCATATAGATCCTGTCTCTGTGATAGGTTCGCATGACAA AGAAGACGTGGCAGGTGAAACTTCAGGTAGTACACCATGTTTATCCTGCTCATCGACATCAGATGATTCACTGAATAAGG ATAGATTAGTTGATTCTTTCTCACCAATAGACGTGTTATTTTCTTCAACTACCAAACATGAGTTTGGTTCTTCATTAACA CCTATGTTATCATTTGTTCTGACCAAATCTCCACATACACTGTCAGAATATTCAGAATGGGATTCACTATGTTCTAAGGA TATAAGTGGTTCTTTCTCTTTAACAGATATCAAATTCATCGGCTTAGGTGCCGACTCAATTGCTGTCTCTTCAATGGTAG CATCCAAGTTTTCTTTTTTAACCTCAGGAGTTTCTATTAAGTCATCCCCAAACTCTTCTTGAGTTGTGTAATAATTTTCA ACATCTGTGGAATCTGAGGAAGTTTCATCTCCAACTTGATTTACACTATCATGCTTGATGGAAGCAGATTGCTGATCATT AGCAGGGTTTTCCTCATCCACATTTTTATTATTATCTTTAACACCACCAACTGACCTAACTGAAGAGTCAGAGCTGTTTT TCAAATCCACTGAATTAGCTTTATATTCTGTAGAGCTGACCAAGGTAGGAAACGGTAGCAGCTCATGTACAACTCCAGAG TAGAACTTTTTCATACTATCTCCAACATTCTGGACGTGATTCTCGAAATATTTAACAGGATCCTGAATACAACAAATCAA GAAAAAATCAGCAGAACTTAAAGATTGCAGTATGACTTTCCTCAAACATGCAATGTACCAGTAGAAGAAACAGTGCAAAA GATCAGAGCAACAAGCAGAATTCTGGGATAAAACAATCCAATAAATGGAAGTTCTTCAAACCACCAACCTGGTTTGGAAC AACTTAATTATAGACTAACTGAAAAGGAATCACTTGAAAATACTATCAAAAATTATATATGATTTGCTTTAAAAACCCTC AAATACAACACAGGTTTAACTGTAAGTGAATTAAATTCTTTAACTGATACCATTCCAAACAAACGCTATGCAAGAATATT GTAAATAGAATAAATCCTATTGTTTTTTAGATTCCAAATGCATGATGCTGTAAACTGATTCTTATAGCCTACCTCACCTA GAGGGAAAAGAGTTAAATGATGATGATGATTATTATTTTTGATATTTGAAATACATGGTCAAAAAAGGAGGAAGAAGAAG AGAAATCAAAAGAATAAATAGCAAAGCTCTAATGAAATTGTACCTGGGCTACAATACCATCCACCTCTTGGCACACTGCT TCAAACTTCTGGTATATGTCCCCCATCCAATTCATACCTTTAATCTTCAAATCCATTGAGTATCCTAGAGCTCAGAATCC TCAGGTTCAAAAAGTGGTATTTTAATCCTAGTTAAAGCTGCAATAACAGTAGAGCAAGGATGAAGGATCTAATGCTAAAC AAACAAGGCGTTATATACAAAATAACATATGCCAAACAAAAATATCTTTCACTAGATAATATACACACAAGATAATACAA GTTTTAATATCTCAATAAAAAACGAAACCAATCCCACACTTCTGAATTCAGTGATGATAATAAGTTCATAACTGTATAGA AGTTTACCCCAAAAAATCAACATCCTCAAGTCTATTGCATAGAAATTCAAACCCTGAAAAGCTACCACTGTAACTCCTCT AAAACCCCAATATTTATCCTAATTCCAAACTACCATCCAAACACCATGTATGGTTTTTTTTTAATATGAACACTTCATTT TGAAGTCACTAATAGAACTCAACCTTCATTAGATTTCACTAGTCATCATTAGTCAAACAATAGAAAAACAAGACTGGCAT ACAAAATTCTTAATTTAATGCTTAACAAGTATTTCCCTCATTAAATGGAAATTAACAATAATAATAAAGATAGTAACTTT GTCAGTACAAGCATAAAAATCAATAAACAAACAAGTTCTAAATTCCACAGCACATGCTTGAACCATATAATAATAATACA CAACATCATAAACATCAACCATATGCACGGGTGAACAAAAAGCAATCACTTTTCAAGAAAAAAGCCAAAAGGGTAACAAA AAGTTACAAACTTTAACGCAACCAGAAAGCCGGTAATCAATTTTACTGAGAAGACATATATGGGTTGTGAACTTGTGATC AAAGAAACATACCCAGAATCCAATTGAGGTGAACCGTGGGAGAAGAAGCAAACAAGTAAACGAACAAGAACACGACGGTG AACGGTGATCGGTGATCGGCGACGATCAAGAGTGTCAATGGGCAAAGCAGAATTGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGGGTTTTGGGTTTGAGAGTGAAGATTATAATAAAGAGGGTTTAAGAAAAC
CDS sequence (LotjaGi3g1v0043000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAATGCTTTCTTTCAAGCCTTTCCTTGATCGTCGGGTCCAATCGTTCTTCCCAATTGTATTGTATTCAACTCTGAT CTTAGGAGCTGCAAGGTTAGTCCTAGATAGTTTGAAGAGCAGCAATAGCCCTGTTTTCAAGCTCTATGGCATGTCACATG GTGGAAGGAATAGATTACCAGTTGTAGTGTTGCCAGAGGATCGCATTGAGGAAGATTGCAATGTGTTTGAAGGGACATGG GTGTGGGACAATGTGTCCTATCCTCTTTATGAAGAAGAGAGTTGCCCTTACTTGGTCAAGCAGACTACTTGTAAGAAGAA TGGAAGGCCTGATTCTTACTATAGGAATTGGAGGTGGCAGCCTCATGGATGCAACCTTCCAAGATTTGACCCTTTGAAGT TGCTGCACGTGTTGAGGAACAAACGGATGATGTTCATTGGAGACTCATTACAAAGAGGCCAATTTGAGTCTATGGTCTGT TTGGTACAATCTGTAATTCCTGAAGGAAAGAAATCCCTCAAAAGAATTCCACCTATGAAAATCTTCAAAGCTGAGGAGTT CAATGCATCAATTGAATACTACTGGGCTCCATTCATCGTAGAATCCATTTCAGATCATGCAACAAATCATACAGTACATA AACGAATGGTGAGCCTGGACTCCATTGCTAACCATGGAAAACATTGGCAAGGAGTGGACATTTTGGTGTTCGAAAGTTAT GTTTGGTGGATGCACAAGCCTTTCATCAATGCTACATATGGATCGCCACACCATGTCAAAGAATATAATGTCACCACAGC ATACAGATTGGCTTTGGATACATGGGCAAATTGGTTAGAATCAAACATCAAACCACTTACTCAGAAGGTCTTTTTCATGA GTATGTCTCCAACACATCTGTGGAGCTGGGAATGGAAGCCAGGAAGTGATGAAAATTGCTTCAATGAGTCATACCCTATT CAAGGTCCATATTGGGGCACAGGCTCAAATCTTGAGATAATGAAGATACTAAATGATGTGCTACAAGAACTGAAAATAGA TGTCACCTTGCTGAACATAACCCAACTATCAGAGTACAGACAAGATGCTCACACATCAGTTTATGGGGAGAGAAAAGGCA AGCTCTTGACAAAAGAACAGAGAGCCAATCCAAAGTCCTTTGCTGATTGCATTCATTGGTGCTTACCTGGAGTCCCTGAT GCATGGAATGAAATCCTATATGCATATCTTTTTAAGAATTATAAAAACCTCTCTTGA
Protein sequence (LotjaGi3g1v0043000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSMLSFKPFLDRRVQSFFPIVLYSTLILGAARLVLDSLKSSNSPVFKLYGMSHGGRNRLPVVVLPEDRIEEDCNVFEGTW VWDNVSYPLYEEESCPYLVKQTTCKKNGRPDSYYRNWRWQPHGCNLPRFDPLKLLHVLRNKRMMFIGDSLQRGQFESMVC LVQSVIPEGKKSLKRIPPMKIFKAEEFNASIEYYWAPFIVESISDHATNHTVHKRMVSLDSIANHGKHWQGVDILVFESY VWWMHKPFINATYGSPHHVKEYNVTTAYRLALDTWANWLESNIKPLTQKVFFMSMSPTHLWSWEWKPGSDENCFNESYPI QGPYWGTGSNLEIMKILNDVLQELKIDVTLLNITQLSEYRQDAHTSVYGERKGKLLTKEQRANPKSFADCIHWCLPGVPD AWNEILYAYLFKNYKNLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | - | – | |
| PANTHER | 8 | 417 | 410 | 8.0E-227 | – | |
| PANTHER | 8 | 417 | 410 | 8.0E-227 | ||
| Phobius | 16 | 35 | 20 | - | – | |
| Phobius | 36 | 418 | 383 | - | – | |
| Pfam | 72 | 125 | 54 | 3.7E-21 | ||
| Pfam | 126 | 408 | 283 | 6.4E-88 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0043000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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