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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0045800 |
| Transcript ID | LotjaGi3g1v0045800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein family; TAIR: AT4G10720.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q8GYH5|BAD1_ARATH Ankyrin repeat-containing protein BDA1; TrEMBL-Plants: tr|A0A0B2Q9N1|A0A0B2Q9N1_GLYSO Ankyrin-2; Found in the gene: LotjaGi3g1v0045800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:4881531..4886421) extracted from Lotus japonicus Gifu genome v1.2.
TAACAAATCACAAGATAAGATACAAAAATTGGCTAGTCAAACATGCCGGTAATATATCACCAGATGTTCTTCAGCTAAGG ATGGTATCCGTTGACTTTGAATTAAGATAAACCTGCACATTTTTTGAGCATAACATTGGAAGGGAACGCAGCTTGTGCAC ACTGCTTTCATGCTTTGACCTCAAACATGAGCCCAGAGAATGATAACATGTTGAAAATTGCAGCTCAAATGGGTGATATA AATCTTCTGTACACAATAATACAGGATGATCCATATGTTTTGCAAAACATAGATTTGATCCCATTTGTTGAAACTCCTTT GCATATTGCTGCATCTATGGGGCATCTTCAGTTTGCCACAGAGGTTATGAGGTTGAAACCTTCATTTGCATGGAAGCTAA ACCAGCAAGGGTTCAGTCCCATCCATCTTGCTATACAAAATGGCCAAAAGAGGATGATGTTACGTTTTGTAGAGGTTGAT AACAATCTCGTTCGAGTCAAAGGGAGGGAAGGTTTAACTCCTCTGCATCTTGCAAGTCAAACAGGACAGATTGACCTTTT AGCTAACTTCCTTTATGCTTGCCCTGATTCCATTGAAGATGTCAATGTGAGAAGTGAGACCGCACTGCATATTGCTGTGA AAAATAAACAGTACGAGGCTCTTCAAGTCCTTGTTGGCTGGCTAAAGAGAACTCGCCATAAAGGTGCTATGGGGTTGGAA AAAATGATACTGAACTGGAAGGATGAGGCTGGCAATACCATTTTGCACATCTCAACTTTCGCCAATGACTTACAGGTATC CTTCTATCTATATTTTGATCCTGCTTTTTGATTAATGAATCAATATCTTCCTTTCTCAAACCTTGTCTCAATTTGTTGTC AGATCAATTAAGAAAGACACGGAGAGAATCAATTATAAACTAACGTCGAAGTTTTTAATTGACATGTCAACATTTTATTG GTGGAACAGAGAATGAAACGATTTAAGGAGAGATGATTTCAGCCCTTCATTAACAACAACGAAGGAAGGACTGGAATCAC CTATGTCACTTACATGTCTCTTTTCATGACTCCTTAATTCAAAAAATAACAAAAAACTCTCCTCTTGGTGGTTACAATAT TATCTTTCTTAATTGTTAGTTTTGTTTTATGTTGTTGACATGTCAGTTTTTTTATTGGAAGAACATGGCAAAAAACATAT AAAATTAATAATTATGTTGTTTGTTTGTTAATTCCTTGGTAGTAGACAGTTAAATTGTTGGTGAAGACTAAGATGGATTT GAAGGCAAGGAATTTGGAGAACTCAACAGCATTAGACATAGCAGGCAGTGCAGAGATGAAGAGGATACTATCCAATGCTG GAGTAAAACATGGCTCATCAGTCACTAATCCTCCCACGTTTGCAGAGAAACTAAGATCAAGGATCACAATTGTGGATAAA ATATTAATCTGTATCCTTCGCATTAGAAAGGATATATCAGAGGAACAGAGAAACGCTTTTCTGATAATCGCTGCTCTTAT TGCAACAGCCACCTATCAATCAGCACTGAGTCCCCCTGGTGGAGTTTTCCAAGCAAATGCAGGAGACAATAATATGAACA CCACCTCCTCCAATTCTACAGCCAATAATTCCCTAGAAAACAAAGGGAAATCAGTCATGACTGAAGGTGATTTCTTGACC TTGTCCATCTTGAACACACTTACCCTTTTGCTATCAACTATTATAATATATATTCTGACCCCAAGCGGGATAGTTGGGAG TTTACTGTATACACCAATGTTTTGGTTTGCCTACTGCTATATCTATGCTATGAAGGTGATATCCCCTACCTCTGCTACCA CAACTTTCAATACCATTACATTGAACTTATTCAACTTCTTGCACGCTGGGATGTTTTGGATATTTTCTTTAGTGTACAAA TTCCGCATTCATGCTAAGAACAGGGAAATCAAAACAAGGAATAGTGCAGGAAGAAATAAATGGTAGTTATAGCACTACTG CTAGCCACTTTTGTCATGTATATATATGATATGATACATGTTGGAGTATTAATATTAATAGACTGCTATCTTGTAGATTG ATAAGGAAGACCAGTCATGGTTTTGTGTAGGAGATATAGATGATAAGAGATTATTGTTGAGAGTCACAGATGTATCTTTT TTTTATAGAGAAAATTGAGAGTTGTGATTGCATCATATACTTGTACTTTATGGAATTTCTATGTATTAGTTGTGGTTTGG AAGCAAATTGTATACTTCACATAATGATAATGTGATGGTCTCATGCTTAGCTTGTGTTCACGAAGTGAACCAGGAGACCG GTTACTGAGTCAAGAACTAGAGAGAGAAAATTCTTATCTCTATTTCTAGTTGGTGTTTGAGTGTCAACATATTGTTAGAA TTTTGGAGGCCCAACTCAACAAAACAAACTAGCTTAAGAGTTGAGAGTTGTTCTACCTTTATAAAAATGCTATCTATGTC ATATCTCTAACCAATGTGAAACTTCTAACTCACGACTCCCCACACGGGAGGATCGACTATATTTATATGAAGTCATGACT CTCAAGGCCCAATGACTCGTTCGGGGTTTACAATACAAATAGGCTCACACACTTACGAGATTGTATAAAGGTTCCTGAAC TGACTTCAACATCGGAGTCCTTGCAGGATCCCCCTCCCGGGCTCACCCATGACGATCAGATCTCAACCCCCCCCCCCCCC CCCTATGTTTGAGTGTCAACATATTGCTAGAATTTGGGAGACCCAACTCAACAAAAAAAACTAGCTTAAGAGTTGAGAGT TGTTCTACCTTTATAAAAAGGCTATCTATGTCATATCTCTAACCAATGTGAAACTTCTAACTCACGACTCCCCACACGGG AGGATCAACTATATTTATATGAAGTCATGACTCTCAAGGCCCAATGACTCGTTCGGGGTTTACAATACAAATAGGCTCAC ACACTTAAGAGATTGTATAAAGGTTCCTGAACTGACTTCAACATCGGAGTCCTTGCAGGATCCCCTCCCGGGCTCACCCA CGACGATCAGATCTCACACCCCCCCCTATGTTTGAGTGTCAACATATTGCTAGAATTTGGGAGGCCCAACTCAACAAAAA AAACTAGATTAAGAGTTGAGAGTTGTTCTACCTTTATAAAAAGGCTATCTATGTCATATCTCTAACCAATGTGAAACTTC TAACTCACGACTCCCCACACGAGAGGATCGACTATATTTATATGAAGTCATGACTCTCAAGGCCCAATGACTTGTTCGGG GTTTACAATACAAATAGGCTCACACACTTAAGAGATTGTATAAAGGTTCCTTAACTGACTTCAACATCGGAGTCCTTGCA GGATCCCCCTCCCGGGCTTACCCACGACGATCAGATCTCACCCCGCCCCCCCACAACAGCTCAACGCCAACACCTCCAGT CTTCTCAACACTGTACCCCCTCCTGGGTAGCTTTGGTCGGCTTCCCCCGATCACAAACAATATATCTTAGCCCCATAATT TGAAAAATGAGGCAAATTATGTGTTACGGGACAAACTCAGGAAGGCCTTACATGCCTATCTCGGAGTAAATCTAGGGAGT TAAACATGTGTTTTGATTATTTATTGAATACTTGTTTACAAATGAAACAAAAGTGAATTTTGCAGCAAAATGTAATTACA ATATGTTTAAATTCATGTTTAAATCTTCACCTTTTTCAAAATCTCTTCCGAGCAGATTCTCCTATAATATTGTAGAAATA ACAGACTAAGTAGAAGTTAGTTATATAGACAAGTTGAGATTGCTCATGTGCATTCTATTAATAAGTTGTGAAGTTGTTGT ATCAACTGTATAATTAAGTTCTCATCACCGTACAATGTTCACGCTTTCTTTCTATTAGAAGTTCTATTTTTTCCTCTTCC TCAAATACCTATCAAAGCAATGGAGAATCGCTTCATGATACTGTAAACATTTGGAGAAATAGTTTCAGTAAATCTTGATG AGGATAATTTATGGCCACGGAACCATCTTGTTCTCGCAGCTGTGACAGGATTCAAGCTTCGAAGTCACTACAAGCGAGAA TCGATTCCATAGAAGTATGCCTCTTAGGAAGATGGGATAGAAGACATCTGTACAACAATGTATGAAATATAGAGCAACAA GATTCCCTGGTACTTTCATAGTTTCTTGCATCAATGCCGGGTTAGTTATCAAATCGAATGGTTGGATGCAATTTTCTTAT CAAGTGTGATGCAGACTTTAACTTTCTTTGCGCGCTTGTCAAACTATTGTTAAGATTAAACAATTGAAAACCAGTTGAAA AGCACAAAGAAGGGTGATGCAACACCTGAATATCTTCAGCAATCAAGAAGATTGCTGATGCTGGATCATCTGTGTCTAAA GTAGCACATGTTAAAGCTATTTTGAATGGCTTAACTAAGGAATATGATCCTATTGTGATTACAGTCACTTCTAAAAAAGT TGTATTTTCTATTGAAGAAATGGATTGCTAGCTATCGCAGGTATAATCACAATTTTCCAAATTCTCATACTGTCAAGAAC TATGTTACATCTCCTAATGCTTATTTTAGAAGTGCTGACGATTCACAATTCTCACGTTTGTTGGGAGAGACATGCAACCG TTTCCCGAACGGGTGACCGCATCTGTCAAATAACAAAAAAGAGTTGGTTCAATTTGGAAATGACACATGTCATGTGCACC TATTTTACATGTTGAAAGTACTTCTATTCCCTCTTGTTTTTCCTTTCCACTAGCTATGAATAATTTACTTCATGATCTTG GTGTTTGTAAGAACTTGTTAAGTGTGTCTCAGTTTTGTAAAGAAAACAATGTGTTATATATTTGAATTCCATTCTAATCA TTGCTTTGTTG
CDS sequence (LotjaGi3g1v0045800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCCCAGAGAATGATAACATGTTGAAAATTGCAGCTCAAATGGGTGATATAAATCTTCTGTACACAATAATACAGGA TGATCCATATGTTTTGCAAAACATAGATTTGATCCCATTTGTTGAAACTCCTTTGCATATTGCTGCATCTATGGGGCATC TTCAGTTTGCCACAGAGGTTATGAGGTTGAAACCTTCATTTGCATGGAAGCTAAACCAGCAAGGGTTCAGTCCCATCCAT CTTGCTATACAAAATGGCCAAAAGAGGATGATGTTACGTTTTGTAGAGGTTGATAACAATCTCGTTCGAGTCAAAGGGAG GGAAGGTTTAACTCCTCTGCATCTTGCAAGTCAAACAGGACAGATTGACCTTTTAGCTAACTTCCTTTATGCTTGCCCTG ATTCCATTGAAGATGTCAATGTGAGAAGTGAGACCGCACTGCATATTGCTGTGAAAAATAAACAGTACGAGGCTCTTCAA GTCCTTGTTGGCTGGCTAAAGAGAACTCGCCATAAAGGTGCTATGGGGTTGGAAAAAATGATACTGAACTGGAAGGATGA GGCTGGCAATACCATTTTGCACATCTCAACTTTCGCCAATGACTTACAGACAGTTAAATTGTTGGTGAAGACTAAGATGG ATTTGAAGGCAAGGAATTTGGAGAACTCAACAGCATTAGACATAGCAGGCAGTGCAGAGATGAAGAGGATACTATCCAAT GCTGGAGTAAAACATGGCTCATCAGTCACTAATCCTCCCACGTTTGCAGAGAAACTAAGATCAAGGATCACAATTGTGGA TAAAATATTAATCTGTATCCTTCGCATTAGAAAGGATATATCAGAGGAACAGAGAAACGCTTTTCTGATAATCGCTGCTC TTATTGCAACAGCCACCTATCAATCAGCACTGAGTCCCCCTGGTGGAGTTTTCCAAGCAAATGCAGGAGACAATAATATG AACACCACCTCCTCCAATTCTACAGCCAATAATTCCCTAGAAAACAAAGGGAAATCAGTCATGACTGAAGGTGATTTCTT GACCTTGTCCATCTTGAACACACTTACCCTTTTGCTATCAACTATTATAATATATATTCTGACCCCAAGCGGGATAGTTG GGAGTTTACTGTATACACCAATGTTTTGGTTTGCCTACTGCTATATCTATGCTATGAAGGTGATATCCCCTACCTCTGCT ACCACAACTTTCAATACCATTACATTGAACTTATTCAACTTCTTGCACGCTGGGATGTTTTGGATATTTTCTTTAGTGTA CAAATTCCGCATTCATGCTAAGAACAGGGAAATCAAAACAAGGAATAGTGCAGGAAGAAATAAATGGTAG
Protein sequence (LotjaGi3g1v0045800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSPENDNMLKIAAQMGDINLLYTIIQDDPYVLQNIDLIPFVETPLHIAASMGHLQFATEVMRLKPSFAWKLNQQGFSPIH LAIQNGQKRMMLRFVEVDNNLVRVKGREGLTPLHLASQTGQIDLLANFLYACPDSIEDVNVRSETALHIAVKNKQYEALQ VLVGWLKRTRHKGAMGLEKMILNWKDEAGNTILHISTFANDLQTVKLLVKTKMDLKARNLENSTALDIAGSAEMKRILSN AGVKHGSSVTNPPTFAEKLRSRITIVDKILICILRIRKDISEEQRNAFLIIAALIATATYQSALSPPGGVFQANAGDNNM NTTSSNSTANNSLENKGKSVMTEGDFLTLSILNTLTLLLSTIIIYILTPSGIVGSLLYTPMFWFAYCYIYAMKVISPTSA TTTFNTITLNLFNFLHAGMFWIFSLVYKFRIHAKNREIKTRNSAGRNKW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 286 | 286 | - | – | |
| Gene3D | 2 | 252 | 251 | 3.9E-34 | ||
| SMART | 4 | 37 | 34 | 920.0 | ||
| ProSiteProfiles | 4 | 229 | 226 | 28.884 | ||
| SUPERFAMILY | 5 | 229 | 225 | 6.36E-32 | ||
| PANTHER | 6 | 429 | 424 | 1.4E-199 | – | |
| PANTHER | 6 | 429 | 424 | 1.4E-199 | – | |
| SMART | 40 | 69 | 30 | 87.0 | ||
| SMART | 74 | 103 | 30 | 13.0 | ||
| Pfam | 98 | 163 | 66 | 5.2E-7 | ||
| ProSiteProfiles | 108 | 129 | 22 | 9.217 | ||
| SMART | 108 | 138 | 31 | 0.14 | ||
| SMART | 142 | 172 | 31 | 920.0 | ||
| SMART | 188 | 217 | 30 | 2.9 | ||
| ProSiteProfiles | 188 | 220 | 33 | 9.244 | ||
| Pfam | 282 | 372 | 91 | 1.3E-10 | ||
| TMHMM | 287 | 304 | 18 | - | – | |
| Phobius | 287 | 304 | 18 | - | – | |
| Phobius | 305 | 345 | 41 | - | – | |
| TMHMM | 346 | 368 | 23 | - | – | |
| Phobius | 346 | 367 | 22 | - | – | |
| Phobius | 368 | 371 | 4 | - | – | |
| TMHMM | 370 | 392 | 23 | - | – | |
| Phobius | 372 | 391 | 20 | - | – | |
| Phobius | 392 | 410 | 19 | - | – | |
| TMHMM | 407 | 429 | 23 | - | – | |
| Phobius | 411 | 429 | 19 | - | – | |
| Phobius | 430 | 449 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0045800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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