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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0046800 |
| Transcript ID | LotjaGi3g1v0046800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Early nodulin-like protein; TAIR: AT5G53870.1 early nodulin-like protein 1; Swiss-Prot: sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2; TrEMBL-Plants: tr|A0A072TQN9|A0A072TQN9_MEDTR Plastocyanin-like domain protein; Found in the gene: LotjaGi3g1v0046800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:4986226..4988315) extracted from Lotus japonicus Gifu genome v1.2.
GTATGGTTTCCAAAGTGTGAATTGCCTAATCAAACCAAAAAGCTTCACACGTTTCACCCTCGCATTCGACACTCTTTTTA GTTTTTAGCATCATCATCCCCCATTGTACTAATCTACTTCTTCAGTCTTCACTCTTCACATTATAAATTCCAATCCTTTC ATCATCATCATTGCTCAGTCTTCAGTTTTCCATCACCAATTTCCTCCCAAACTTCGTGTGTCACACACCATCACGCACTT CCTTCTCTCTCTATTTTACACTTTATATACACACACACACTCATTCAATTCACAAACCACCACCACCACCACCACCACAT CTTTCAAATGGAGTTTCAAAGACCACTATGTCTCTTGTTCCTTCTCTTTTCTCTTCTCCCAAGCTCCCAAGCCCATAAAT TCTACGTTGGTGGAAGCAAAGGTTGGATCCCAAACCCTTCGGAGAGTTACACCCTATGGGCTGGAAGAAACAGGTTCCAA ATCAAGGACACCATTGGTAATTCCTTAACTTATTTTCTATATCATATAACTGGTTAATTGGTTTTCAGTTTGAAAGTGTT TTCGCCTAAGGAAGTCCAAAACTCTTTTTCACATTTGGACCATTGGAATGTGCGATGTTAAATTCCAACGACTCAAATAG ACTATTAAACTGAAAACCAAACACACCATGAAAAGAGATGCAATTTTGATTATCTAATTACAGTTCTGATTGATTTAAAA TTCTGGGTTTCTCTTTGTTTTCATGATCAATTCTACAGTTTTTAAGTACACCAAGGGTTCAGATTCTGTGTTGGAAGTGA AGAAAGAGGACTTTGACAATTGCAATAAGGCAAACCCCATCAAGAAGTTTGAAGATGGTGACACAGAATTCACGTTTGAT CGATCAGGACCATTTTACTTCATCAGTGGAAAATATGGAAACTGTGAAAAGGGTCAAAAGATGATCCTGGTGGTTATATC ACCGCGAGGAACACAACCACCACCGTCGCCGCCACCAAAATCTTCACCTTCACCGTCTCCGAAGGCGAGTCCACCATCTG GGTCACCGCCGACCGCCGGCGAACCCTCTCCGGCAGGAACTCCGCCGTCTGTATTGCCTTCTCCGGCGGGAGCTCCAGTA CCGGCCGGTGGACCGTCGGCCGGAACTCCTCCGTCTGCATCAACATCTCCATCTCCATCTCCGGTAAGTGCCCCTCCGGC GGCTTCTCCGGCACCGGGAGCTGAATCACCATCTTCGTCTCCGACAAGCAACTCTCCGGCGGGTGGACCTACGGCGACTT CACCTTCTCCGGCGGGAGACTCACCGGCCGGTGGTCCTCCGGCACCATCTCCGACGACAGGTGATACACCGCCATCAGCT TCCGGTCCAGACGTATCGCCTTCCGGTACTCAGTCGTCGCTTCCGGCGGATACTCCGTCGTCATCATCCAACAACTCGAC GGCGCCGCCACCGGGAAACGGTGGTTCATCGGTGGTGCCATCAAGCTTTCTGCATTATTCTGTTACCATTGTTGTTGGTG CTGCGTTACTATACGGCACCGTTTTGGTTTGAGACTGAAACTGCTGAGTGGTGTGAACATTTATTTAGCGGCGAGTTTGA ACTTTGGTGTTGTAATTAATTCTGGGTTTCATTGTTGTTATTTTCTCATGGATATGAGATGATTGATAGTAGCATTATTT TGTGATTTTTTTGTTTTTTTGGTATGCATTCCACTTTATATTAGCATTATTGTACTTTGATTCTGTGATATTTTTAGCCT TTTGCTACGTGTAATAAATCTCATCTGATATCTTGTCCTTTCTAGATTTTTTAGGGATGCCAATTGAGTGGTGGGCTGGT GGCTATATTACACTCCCATTTATGATGTTTTTAGATTGCTGTAAAGTAGGAAAAGTTAAAAAATAAAGAAACATGGTTAG TGACGGTTTGAAACCAATACAAACATAGAAATTAGAGATATGCTTTAAAGGCTCATCATCTCTTCTTTAGAACCTTTTTT TTCATATGCTTGAAGTGAATCCATCAATTGGTCCACTATCAATGTGTCTTAAGTCTTTTTACTCTTCAATTTCACAAACC ATATAATGAG
CDS sequence (LotjaGi3g1v0046800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTTTCAAAGACCACTATGTCTCTTGTTCCTTCTCTTTTCTCTTCTCCCAAGCTCCCAAGCCCATAAATTCTACGT TGGTGGAAGCAAAGGTTGGATCCCAAACCCTTCGGAGAGTTACACCCTATGGGCTGGAAGAAACAGGTTCCAAATCAAGG ACACCATTGTTTTTAAGTACACCAAGGGTTCAGATTCTGTGTTGGAAGTGAAGAAAGAGGACTTTGACAATTGCAATAAG GCAAACCCCATCAAGAAGTTTGAAGATGGTGACACAGAATTCACGTTTGATCGATCAGGACCATTTTACTTCATCAGTGG AAAATATGGAAACTGTGAAAAGGGTCAAAAGATGATCCTGGTGGTTATATCACCGCGAGGAACACAACCACCACCGTCGC CGCCACCAAAATCTTCACCTTCACCGTCTCCGAAGGCGAGTCCACCATCTGGGTCACCGCCGACCGCCGGCGAACCCTCT CCGGCAGGAACTCCGCCGTCTGTATTGCCTTCTCCGGCGGGAGCTCCAGTACCGGCCGGTGGACCGTCGGCCGGAACTCC TCCGTCTGCATCAACATCTCCATCTCCATCTCCGGTAAGTGCCCCTCCGGCGGCTTCTCCGGCACCGGGAGCTGAATCAC CATCTTCGTCTCCGACAAGCAACTCTCCGGCGGGTGGACCTACGGCGACTTCACCTTCTCCGGCGGGAGACTCACCGGCC GGTGGTCCTCCGGCACCATCTCCGACGACAGGTGATACACCGCCATCAGCTTCCGGTCCAGACGTATCGCCTTCCGGTAC TCAGTCGTCGCTTCCGGCGGATACTCCGTCGTCATCATCCAACAACTCGACGGCGCCGCCACCGGGAAACGGTGGTTCAT CGGTGGTGCCATCAAGCTTTCTGCATTATTCTGTTACCATTGTTGTTGGTGCTGCGTTACTATACGGCACCGTTTTGGTT TGA
Protein sequence (LotjaGi3g1v0046800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEFQRPLCLLFLLFSLLPSSQAHKFYVGGSKGWIPNPSESYTLWAGRNRFQIKDTIVFKYTKGSDSVLEVKKEDFDNCNK ANPIKKFEDGDTEFTFDRSGPFYFISGKYGNCEKGQKMILVVISPRGTQPPPSPPPKSSPSPSPKASPPSGSPPTAGEPS PAGTPPSVLPSPAGAPVPAGGPSAGTPPSASTSPSPSPVSAPPAASPAPGAESPSSSPTSNSPAGGPTATSPSPAGDSPA GGPPAPSPTTGDTPPSASGPDVSPSGTQSSLPADTPSSSSNNSTAPPPGNGGSSVVPSSFLHYSVTIVVGAALLYGTVLV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| PANTHER | 1 | 129 | 129 | 2.1E-68 | ||
| SignalP_GRAM_NEGATIVE | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 129 | 129 | 2.1E-68 | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 7 | 17 | 11 | - | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Gene3D | 22 | 134 | 113 | 1.0E-35 | ||
| SUPERFAMILY | 22 | 123 | 102 | 2.74E-33 | ||
| CDD | 23 | 123 | 101 | 1.90824E-55 | ||
| ProSiteProfiles | 23 | 124 | 102 | 39.113 | ||
| Phobius | 23 | 299 | 277 | - | – | |
| Pfam | 33 | 116 | 84 | 6.2E-22 | ||
| PRINTS | 122 | 138 | 17 | 3.7E-9 | – | |
| MobiDBLite | 124 | 297 | 174 | - | – | |
| MobiDBLite | 127 | 209 | 83 | - | – | |
| PRINTS | 142 | 154 | 13 | 3.7E-9 | – | |
| PRINTS | 154 | 175 | 22 | 3.7E-9 | – | |
| PRINTS | 190 | 207 | 18 | 3.7E-9 | – | |
| MobiDBLite | 210 | 235 | 26 | - | – | |
| MobiDBLite | 237 | 253 | 17 | - | – | |
| MobiDBLite | 254 | 297 | 44 | - | – | |
| Phobius | 300 | 319 | 20 | - | – | |
| Phobius | 320 | 320 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. |
Expression pattern of LotjaGi3g1v0046800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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