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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0065900 |
Transcript ID | LotjaGi3g1v0065900.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Auxin efflux carrier family protein; TAIR: AT1G20925.1 Auxin efflux carrier family protein; Swiss-Prot: sp|F4HWB6|PILS1_ARATH Protein PIN-LIKES 1; TrEMBL-Plants: tr|A0A151RX36|A0A151RX36_CAJCA Putative transporter C5D6.04; Found in the gene: LotjaGi3g1v0065900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:6982650..6998483) extracted from Lotus japonicus Gifu genome v1.2.
AGATGAAGTATTGTACAGAGCTAACATCAGAAAATAAGAAAAATGAAAAGGAACTAAGAGGGCTGAATTGAACAGAAAAA TCAGGAGGCCAGGGGAGATCAAATCAATGGAAGAGTAAGATTTTTTCTCCCCTCTCATTATAATTTATGTGGTTAATTAT AAGATATGATGATGATTTTATTTTGCACTTGAATACATTTCTTTCCTTTTTTATTGTAATTTGTTTTTATACCGTCGGGT AGGAGATCAATCTCACGGATACTTGCATATGGAGATACAGTGATTAAAAAAATAATAGGATTTTTTTTGTTTTTTAAATG AAAAGAAGGAGCGATGATAATCTTTGCTGGATTTCTTGATTCGCCTGGGAGAGAGTCAAAGTTCGTTGGAAAGTACTTCC TTTCTATTAGTGTTTGTTGGATTTCTTGATTCGCCTGGGAGAGAGTCCAAGTTCGTTGGAAAGTACTTCCTTTCTATTAG TGCCATTGGAAAGGATGAAAAGAGATAATATTGAGGTGGTTAACTCTTTGGTTTGAATGAAAGAGTAGGATTAGGATATG AATGTAGTTGTTGGTAGCATAACTTTAGTTTAAAATGTCATCAAGGAGAAGGTATAGACTTTATCTTTCTCGTTAAGATA GATTATCATGTTCTTGAAGACATGGCTTATAGTAAAGTTATAGAGATTATACCACCCTCGAATGCTATTATTGGAATAGT GTTATAGCGCTTGAAGTCCTTCAAGAGAGAGGGATTGGGGAACTTTGGGAAACAGAGCATGGTAGACCTCCTTAGAAGTC TACCGAATTAAAAAAAAAAGAATTGAATTGCGGAAACCACACGATTCTCGACTATGCTCCAAGCTTTTTTTTATGAAACC TGCACCGAATCGCATAATAGAATTGGCAATGCAAATCCGTTTTGAGTGAAGGGTGAAGAGTCCAGAGTTCAGGGTTCGAA CTCTGATGATGATAAATTTACTAACATTACTAACAACTAGTAACATTTACCTATAAAAAAATAAAATAGAATAGAAACAC TCAACTAAAAGGTTTTAGGTTCCCCAGAAGAGTTAAAATCTCCCTTAGCTAAACCTTTTCTTACCCTATCTTTAAACACA TTACTATTTTGTTTGTATAAAATCAATGAAGGTCTCAGGTCTCCCCACCTAGCTACGTGCCCTTTACACTCATTCATTTT AAAGAACACTTCCCAACACTGCTGGCACAAATTTAATCAGGGTTGATAGACATAAAATTTAAATATGATAGAACATTTAA AAATTTTCACACGAGAGATCCTAAAGGTTACTTATTTATTTGTCATGTGTTAGATAAATTACATTATATAAAGATAATAA TAATTTACCTCATAAGTGATTACCGTAAAACTTTAGTATATAAGTTTTTTTTTACATTAAAAAGATAAATTACACCCTTC AGAGATTGATCCCGGAACTTCCTTCATCCAACACATCCTTAACTCTTACTACTTGAGTTATCATTCAGAGATTTTGGAAA GAAGTTTTGTTTGATAAAAAATAGTGAATTTATTTTACATAATGAACCACTTACTGAAAGATAACGACAATTTATTACTT TAAGAGGAAAAAGAAGTGACCAGGGGTTGTAAAGCTTAAAAGATAGAATACTACTTATTGAATATGAATACTGAAATGAA AAAGTGGCGTGGTGGTGGCGCAGGAATATTCACGGTACAAACTACAAAGTGAGTTGAACTTGAAAGGAAATATTCGTATC CAATAACGCAAAAGAGAAATTATGATTGGAGACGAGGAATATTGGGACTCAAATATATGAAGAAAGAGCAAGTTAAATTG CTTTAGGTGGTAAGTGGAAGAAAATGAAGGAAAGTTGTAAGTAATTTTTCCTTATAATCATGAGAATAATGTACCTTGCT TACTTGAACATGCGTTTAGTTCGGATTACGATTAGTGAGGAAAAATTGAAGCCAACAATGGGAAGTACAAAATATCAAAC AATAATGGTCACGTAAGGCAACATTAAGAGATTAAGATGAAGAAGAGTCACCACAACAAATGAATTCTACGGGAAATCAT TACCAAAGAGATCATTCCCATGGGGAACCAATCTTAGAAGAACCAATAGAGGAGAATATTCAAGATAAATTGCTTCGTAC GGAAAAGAAAATTATTGGATTTAGAAAAATCTATACATGTATCTTAGATTCCACCATAAAACGAGCATGTAGTGCGGTCT TCAGCTTGACACGCTCGACGAAAGCGACAAATTGAGAAGTAACCGATTATCACGTTCGGTAGGAGTGAGTGAAAAGGCAG GAAGAGACAAAGCATAGCAGAGTCAAGTCACCAATTAACTTGGACGAAGAGGAATCCAAGAAAAATATGGGGATGTCAGG CGTCAGCTAAGTCCTTTCACGTCTGAGGGGATGACTGTGAAAATGTCAAAAGAATTTCATAAGCCAATCATGGCATAGGG ATATGTTGGAGATACATATCCAACCGAACACTTGAACACATTCATGATAACAATATCTTTACTCGGAGTTTCTGATGTCT TAAACTGCAGCGTTTTCCCTTTGAATTTTAGGAAGGAAGCCTTGTGTTGGTACCTAACACCTCCTCCGAATTTGATTGGA AGCTAGGAAGAGTTGTGTAGAGAATTTCTTCACCATGTTATCACTAGCAAAGGGTTGCCAAAAACCTAACATACACTTGG AAGCTTGAAACATGGGAAACATGAATCATTGGGATGTTTCCTTACTAAGTCTTACTAGGAACCAACTCTTGTTCAAGATT TAGACCCTGAGGCGAAGCTTCTCTTACTATGTGAAGCTGTTAGGATTGGAACTCCTTTTCACACATCTTTAACTAAGACT CCTCCATGGGAAATGAAGAAATTTTAAAGGCGAGTGATAAAACATGTGAATATGTGGATGATAGCTTAGCAGGAATGACA TGTCAAAGAGATGATACTAGTGAGAACAAACACCAAAGCAAAGGGATGGTCGATATGAAAAGAGAAGCTTTGACAATAGA AACCATCTGAGGAATTTATGAGGGAGAAATCACAATTAGTCCTTGTTAAACAAAACTCCATCTCAGATATATAGAGATGT GATGAACATGACTTTTGCACACATGCCCTGACTGGCACCTCTAAAGAAACATTCTGAATATTTAGATATGAAGGAGTATT GTGAGTGCCATGAAAGTCACGGACACAACATAGATGATTGCATTTAGCTAAGAGATGCAATCGAGCAATTGATCCGAGAA GGAAAGTCGAGAAAGTATGTTAAAGAAGATAAAGATTCTAAAGGAAGTGGAAGCTAACTATTATACAAGAGAAGATTTCA GAGTCTAGAAAGTTGAGACAATCATAGGGAAGAGAAAAATTACTCCCATCGGGTGAAAAAGATGAATCTTCTCGAAAAGG AATGAAGGATTCTTCAAAGAAGAAATCCAAATGCGAGAAAAATTCCTCCTCCTTTAAAAGCAAAGAAGATGGAACAAGAG GAAGAGTAAAAAGTATACCTGAAAACGATAAATGCTTTGAATTGATAAGTACAACCACGAGAAAGACGAGAAGATGCATT GCTGAGGATTCAAATAAGGAAATAAGAGAAAATATGATGCTTAAAGGAGGAGATAATCAGATGCAAAAAAGGGAAAAGTA AATTCAAGGGTTTACTCTTTGAAAGATATGTACTCAACTTTTCGGTTTCCTCCTAAAAGAGACAGTTATTGATTCTTAAA AAGAAAGAGAAAAGGCGAACTATCACAAAGTAAAAAAAAAGGATATATTTTTGCCTCGGTCAAGAAGTCAAACAAAATGA GGGTTATGATAAGACAGGTAGTTCAAAGACCGTTACAGAAGAATCAACTAAATAATGCATGGTGAATTCTGAATGGATCA AACAACTTACACCTAACATGCTAGAGTGCGGCATGCCAAGATGGGGGACTCTTGTTTCGACAGGCTACGAAGCCGCTAGA CCCACAAACTAAGACGAGGCAGTCAAAGGATGCCAACACGATCAGAAGTCTCCTTTATGGGATTTCCCGTACTCTTACAG AGACAACCACAAAGGATACCGAGCCTACACATACAAATTCTTGTTCATTTATAGACCATGTTTTTTATTCAAGCATTGAT ATATACTTGAGTTCTATTGAGAATCAAGATTTCTCTCCAAAACACTTGTACTGACTTGAGCGTCGAGGTGTCTTCTTCAG ATACCTCCCTCACATGGAACCAAGAACACCACTGTCATCCTCATGACACTCACCATCGCACACCCTCGTCAATGCTAAGA GAGGATCTCACCGATTCTTAGGCTCGATAGTTACCGACAGTCAAATCAACCTGTAATTTCAAATTATATATACGAATTCG AAGGTTGATAGCTAATGACCATAATACGAAATTAAAGGTGGCTAGGTTACAGACGACCAAAATCGTTAATTTGAATTTCC CAACTGTCATATATACTCGTCGGTAAATTTGTCGTGAGTTATGATGGTCAAAACCATCTATATTGTTCAAAGTTACCGAC GGTCCAAACCTTCCATGAATTTTTATGTGGTTATTGACAATCTTGCCGTAAGTAATTAGTTTTTATTTTCTTAAAAAAAG TTATGTCTTATTGATGGCTAGACGTTCAACAACCGCATAATTTACTGACATGTCGTGATCGTGGGTAATAACCGTCACTA ACATCAATAACTCTTGTAGTGATTTGTTTAGGTTGTTCAGTCTTTCACACTCTACCTATCTTCCCAACACTACGATCCAC ATAAACTAATCAAATCCCTTTCAAAGAGAAAGAACGAACTAACTAAACTTAATTGACTTGACAGTAACTAACTAGCTTGA GTGAAAGTGGCTTGACCCTAATCAATGAAATCTTAATCTGATGTTGGACGATTGATACATAAACACACATATATAGATCA GCTGATATGAGCCTTCAACTAGTACTTACCTAATAAAAACAGAAAACATTACAAACCGCCCGTCAACAAACTAAATATCC AAAATAATTATTCAACTTAGAGTTACAAAATTAACCGGTGGGGTAAAGTAAGCCCAAGTAATTAAGAGTTTTTGACAGAA GGAGAAAGGTTTGAAATGGTGATGATGGTATAGTGGAGAGAACAAAAAGTAGAAAGATGAGGTCAATTTCGATGTAACGT GTGTGGCAAAAATTAAAGAAGGGGAAAATTAAAGGGAAAATGGAGAAGCTTGAAGAGAAAGTAGATTCAAATTAAACGTG ATTATTACAGTATAAGATTAACGATAAAGAGTGTAGACACATGGTTGTAATAGTGCCCATTAATTATATTCTTCTAGCTT TGGAATTCTTCAAACAAATATATAATTACGTGTTTGAAACATAACATGACATTTTTAGCTTTCAAAAATAAAACATAACA TGATATTTTGGTTTTGTGGGAAAAAAAAAAGGAATATACAGAATGGAATACTCATTTAAAACTTTTTCACGATATAAAAA GAAATGCCCCGTAATTTATTTATATTTGATATGTTTTGTAACCAAACAGTTGAAAATAACTTCTTAACATGAAAAATATT TATTATATTTGTAGATAAACATAAATGAATTTATGCTTTTCAAAAGTTCACTTAATATAAAATTAAATATTTTTTAAAAA ATAAAATCACTTTTTTTAAGCAATGGTAAACTGACAAATTTTTACTTAAAAATACATTAAAAATAATTGATTGTTTTAAA AGCTACTATTAGAAATAATTAGAAATCTGTTATTTTCAAAAGCATACACAAATTGCTAAGTGAAAATAAGTAATTATATC AGGAAATAAGCAATGATAGATGAACTCTATGTATATTATTCAAATGAGTTCAATTTTTTATACTCAATCAAATGTTAAAT GTATAGGCAAGGTTATATATGTAATTAAAATTATAATTATGTTCTAATTAATTATTGAATTTATGAAACATAACATCTGG AACATTATTGTCATGTTCTATTATATTTTTTTGTTAGGCTGCAAGAGGCTCCAAGTTGGGCTAACAAGAACAAATCACAA GTGGATTGAACATCACATTTTTCACCTAAAACCTTAAAGCATTAGGTGTATGAGTCTTCTCACTTATAAAGTGTTCATTA TTCTCGTAATCTTCCCATGTGAGACTACCATATATATATATATATGTATATATATAATCTCATTCCATTCTGTTGTTTTG TTCGGTTTCATCACCAAACATTACCAATCTACCATATAATCTGAACCAGGGGACAAAACGTGTATGTACTAAGTAAAACC ATTAACAAGTAATTACATAATCAATTTGGCTTTGTCAGGTCAGGTGCTTTTTCATCTAGTGCGCTATGATTATATATATT TCTCCATACTCACACTACAAGCACTTCACTTGAAACCACCATTCTATTTTAAGCATTTAAACCCACCTTCTCCTAGGCCA AGAACAGAGCATCAATCAGGTAATGTTTTTCTTTTTTCTTTCATCTTCCATTGTAGCTAAATTAGTTGTTCCTCTTTTTC CTTAGTAATAGACATGTGAGAATTGTGTGTGTTTGATTGAGTGACACAACACACACAAAAACTGCATTTATTAAGTGTGT GTATGCATACAAAACTGCATTTATTATGTGCATGTGTAATGTGTTCATACTCCAGAGTTCAAATATGGTATCATACTATC TATCATTCAACTATGTTTAGTAGTAGTTCTTGACATATTAATCCATGTGAAAAAAATTCGTCTCATTTTTTTTCCTATAT GTCTCAACTAATAAAATTATGACACATCAATTAAAAATGCATAAATCTTATATTTATAACCTTACATAGATGATTTTTAA CTAACATGACATCATTGCATTGGTGAAACAGAGAAATACACATATTTCTAATTTATTGTATGTTTTCTGGATTTTCATAA ATTTAGTGTTTGGACACAGATTTTATGCTTCCATCATGTTATTATTATGCTTTCAAGATTTTCTTTTTCAATTTTAATTA GTGGCTTTTGTTGAATTCTTCTCAGAAGTGCTTGATTATATAATATCACTGCGCAGCTAGCCAGTGCGTTATGGATATAT ATATTCCAAAGCAAATCATAATTAATGATAATTGGCCTTATTTAATTTGTAATGCTCTGAAGAAAAACAAAAAGAATCAA AATTACATGTTTTATTTGCAACCTATTTGGCCTTTATATTCTTAATTAATTATCATAGGAAGGGAAGAAATTAAAGAAGA CAGAAGATCAATATGGAGTTTTGGAAGCTATTCGTTGTTGCATTAATGCCTGTTCTGAAGGTGCTTTTGGTTACTGCTGT TGGGACATTCCTGGCACTTGATCGCTTTGACATACTCAACGAGACCGCCAGGAAACACCTGAATACTGTGAGTTTCTTTT CTTCTTTCATTTTTGGTCTTCCCTGCCCCAGATATTTTAAGGATACACTCATACACAACTAAGTAATTTCCTAGAAAAAG GAAAGACAAGCTTGTGTCTAATTTTTTTTTCTTTTAATGTGAAGTTAATTAAAAGAAGGATGAAAATCATGGCACTAGAA TGTGTTATTGTGAGGTTAATTATCCAGCTTGAAGAAAGTCACACGTGGGAAGAAAAGTTCAAAGGAAAAGAAATTAAACA ATAATGTTTTTTCATACTCCATTTCAACTTTCATCCTGAGTGGGAAAGAAATAAAAAAATAATAATGAGATCTGATGTGC GATGCGATAAAAAATTTTGCTTTTCAGTCAGATGCTTCCGATGATTGACTGATGGGTGATTTTAGTTCCCCAATAATTTT TCGAGCACATTTAGTCCCTCAATTTTTTAAATTGTTGCAAATTAAATGTCTCTATTATTATTATTCTGCCTAAAACTCTT AAATTCTCATTTTTCTTAAGAAAAATCTTCACAAAATGCATCAATTTAGTCATTGTAGATGTTATTTCCATAAAAACCTA CTAATCAAAATATAAAAATTCAATAAAACATTAAAAAATTCTAATTTTCATAATCTCATATAATTAAGAGTTTAATTTTG ATGCACCGACGGTGTAAAGTTTTTTTACACCAGGATTCCAATGTTTTGAAGTAAAAGCAATAATTTGTTCCTTGTCAAAA ACCTTTTGTTTCAAAATACTACCAAAGCCAATATCAGAGGCATCAGTTTCAATAATTTTGAAAGCTTGAGGATTAGGGAG ATAAAGACAAGGGAGATTCTTGACACGAAGTTTGATTAACTAAACTAAAATGAAAGCTCTTTTGAAAACCTTTTGTTTCA AAACACGCCGGGAGATTGTTGATCTTGTCCTCGATCTCAGGTTCAAGATGAAGCTCAGAGATTCTCCTTTTGAGTCTGCA ATACCTGCTAATATGGCCCGGCTTGCCGCAGTTGTAGCAGGTAACATCTTTTCCTTGAGAGGGTCTAGTCTCAGGAGGGT TCTTTGGAATTTGCGAAGATTGGGGTTTTGATCTATGATGTAGGAGCTTTTTAAGATAATTTTAGTATTTTAGTAATTTT ACTTATTTGTAATTAAGATCTTTTAGGATCTTAATTATTTTTTGTTAGGAACTTATTTATTTTCAATTAGGATCTTTTAT TTTCAATTAGGATCTTTTAGGATATTATTTATTTTACTATTAGGATATTTTCTTTTCTTATTTAAGCACTTGTAAGGCAT AGCCTATTTCAGTTTTGATTGATAATAAAATTTAAGAGTTTTCTCTTCTTCTCTGGTGGATTCCAGTGTATTTTCTTGCG CTTGCAATCTAGGCTTGGGTTTCCTATGATCATTCCTGCTAGATCTCTTTCTCCATTGTTGTTTGGGAGGAGGATCTTGC TTTCTGGGTTTAGGTTTCTTGGGACAACCTTGAATTCCGAATTGTTCGCAGAAAGTACCCAAATCCCTGCGATTCTAAGA CTTCTCCTTAGTGAGTTGCTGTTGGATTTTGTCATCCTGACAGATTTTGAGAGCAACTCTTTGAATGATAGCTATGAGCT GTCCATAACTAAGGGTGTGATATGGGATTTCTCCCCCCGGATTTTGGCTTCTAAGTTTCTCACGAACTTTGTCGCCAAAA GATTTAGGAAGACCGGCCAGGAATTTCTCTTTCCAGAAGGCTTGTTGGCTGTCTTCACGGGTGTAAACCCTGGTTAGGAA GGTATCGATTGAACCTTCCTCTTCTAATCTTGATATCCCTAAAGGATGTCAACTTGAAAAACCTCTTTTCAAACCTTTTC AAATCAGTAGCCGTTCCAGACACTCGGCTCAAACTCTTCGAGCAAAAAAGGAATCTGACAATGAGCTCCTCCAAAAGGTG GTAGAGCAACTTCAGCTTCTCAAACAAGTTATTCCTGAGACTCCGGAACCTCCTGAGACTCCGGAACCTACTCCGGAAGC AGTTTCTAATCCCACTATTACTGCTCCTCCTCCTCCAAAAACTCGTACTTCTACTCGTAATACCTCTACTTCTTTAAATA ATATTGAAGATGGTAAGGTTGAGTCTGATTCTGATATTCAATCTATGAAGTCTGACGTTCAATCTATCAAGAGTATTCCG GTCAATACTGTCATTCACAATTCTAAGAATCAGTGGAGAAAAGAAACCAAGCTCTACTATCCTAGAGCTACTGCTCCTGA TCTTCTTTTAGAAGAATCTTCAAACTTCAAAAGCTTCAGTGCCAACAATGTCTATGAATGGAATATTGATGGTGAAAACG AGTATGGCATCACCAAAATCCTCCAAAATATGACTATGGTAGCCACTGCCTATGTTACCGCCAACAATTGTCCTGAATCT CTTATCGTTGAAGTCTTGGTTGCTGGTTTCTGTGGCCAGCTCAAAGGTTGGTGGGATAATTATCTCACTCAAGACGAGAA GGATCAGATCTTGAGGGAATTGACTTCAGATTGAAGGTCTTGAATAGTGACGGGTTTGACCGTAGATTTCTCAAGACGCT TGAAAGTATCTCTAAGATTGAATTTATTGGTGGTTATAGGACTTTTGGGAGGCCTATCTTCAAGAGTAGACCTGAGGCGT CCCAAATAGATTTTCTTTTCCTCAGGATCAGGGATAGAATTAATGGCCCTGAAGAGAAGATCTTGTTCATTGGTCAAAGT GTTGATGGACAAGGTATTGACGGAAGATGATGATTGAGAATCATCATTCTGAATTTGATTTAGGTCTTCAGAGACCTCAG AATCCGAAGGATTAGATTCTTCTTCATCAGAAGTTTGAATGAGGAGATTGTTGATCTTGTCCTCGATCTCAGGTTCAAGA TGAAGCTCAGAGATTCAGGGGTTTGATTATGGTACTGAGTTGAGGACAGAAGTCCGCAACATAATTGAGACAACCCAGGA ATCTTTGTAGTTGAGTTTTGTCAATGATTTGATCAGGGAATTTATCCGTGAACTCGATGGCTCTATTGATAGGAATGATG GTTCCTTGGTGGATGTTGTGACCAAGAAATCTGATTTTGGTTTGGAACAAACTGACCTTTGTCTTGGATACAGCCAAGCC AAATTTTACACCGTCAACCAATCAGATTTCAAGGATGTGACATGTCAATTAAATAAATTAAAGGAAAAGAGAGATTTTCT CACATCATTGAAATCTGATTGGTTGATACACCGTCAGTGCATCAAACTTTTTCTCTATAATTAAAACTAAAGGACCACAG ACAAGCCAAAATTTAAATGAAATGGTTTGGCAATTGAGAGCATAGATCTTTTCTACATTCTGTTTTTTTCTTCTTCTGTT TACACATTTCGTCCTTATTATTTTTTTAATTTTAAAGTGATTGAGTGTACAAATAATAAAATAGAATGTGTAAAATGCAA AACACTCATGCAAGCTCAAATGCCGGTGCATACTTGGGTGCCCATAAATTCAAACGAGGGTAAACTATAGGAGTGAGGTG TACCAATAATGTATAAACACTTAATAAGACAAGTGCTCACTAGATTTTTTTAGATTATTTACGTTGTAACCCCAACTGAA TTTTAGCTTACTAAATATACCCTCATTTTTTTTTAATAATTATGTATATGTATGTAAAACCTTACCACTGGTAAATTATA CCCAGAAGCAAAATAACTCAGCACCCCATTCCTCTGGTTTAACGTGATTTTGTCCCCAAATCTGGGTTTTAACAACATAT GCATTCCAACAAACACACCAAAATCTGCAACAATATGTTAAAACACCAGATTGAAGAGTGAAGAAGAAAGGAAAAGGGGA AAAAGCCAGATTGACGAGTGGAGAAGAAAGAAAAGGGGGAAATCCCAGATTGAAGAGTGGAGAAAAAAGAAACGAAAAAA CCCAGATTGAAAAGTGGAGTAGAAAGAAAGGGGAAAAGATAGAAACGTACGTAGAAGGACTCAGACCATGACCTGCACCA CCAAGCCGGAACAAAACCCTCATCTTCTCAAATCCATCTTTGACAGCGGCCGAGATCTCGCCACTACCAGATGCAGAAGG AGAACGAGTAGAAGAGGAGGAGAGGTGAACCCACCAGATCTAATTACAATAAACCTACAGGGTTGATTCAGAGTTTCAAG AAGTCCACAATATTATTAATAAATAATCCAAGTGTAATTTTTCTACCGGTACATGTCACTCATGTATTTAACCAAAAAAA TTTTGCTTGTACTAGAGGAAATGCCTCAAATGCCAATGGTGATCTGTCATTGGACTAGCTAAGGAAACGCAGAGATCCAA TTGCGGCCCAGCTAGACTTCAAGTGTATGGGCCCTCCAAAGTAAATTAAAATAAAAAACTGATAAAGAGACAAAAGAGAA AAGAAAGAAAATGAGATCCCAGTTTTGGCGTATTGGTGTTGGCCTATTGAAAAGAAAAAAAACAAAGTGTTAGTGTGGTG AAAACTGCATGTAAAGGTGTGAACACATGTTCGATTGTTGATAAAGTCATTTATTATGAGAGACAATTATAAAATCTTGA TCAGATGTGTGTAGATACACGTGAAATAAAAAAAAAAAGTATAGATATTGGAAAGGGAGATAAAAGAAAAGAAGATTTTT TTTTGATAAATATGATAACAATAAGTTGACCTCCAATGTTAATGTCTTTTTTTCACCCTTCCTTTTCATGAAAACAATCT CTTCCATACATGCCAAAAATGCTTAACTATTTTAGTATTAATATTCGATATGTTTATTTTTTACCAGAAAAAGAAAGAAA AAATGGGAGCTAAATGGGAAAATACTCTTCACCCTATGATGTTTTTGGTGTTTTTGAACAGATGGTATTTTTTGTCTTCG CTCCTACTCTTGTTTGTAGCAGCCTAGCTGAAACAATAACCTTTAAGAGCTTGGTTATGTTGTAAGTTTGTTTCTAACCA CTACTGCATTTTGTTTTCAATATATTTCCTCATTCAGTTAAATTAGACAAGAAAAATACTTTCATGAATTATGCAGATGG TTCATGCCGGGGAATGTTCTTCTGACATTTATAATCGGTACGGTTCTTGGATGGTTACTACTCAAAACAACTAGAGTTCC TCATCATCTTCAGGGCCTTGTGTTGGGGTGCTGTGCTGCAGGTAAGTCATGTCGGTACTACAAGTATAATGTCTCGAGTC CCACATTGATTAAGAATGAGTGAGATGAAGAAAACATGAGAGACGTCATACATATCTACTACTTGGCTGGTGATATGATT TCTAAGAATTTGAGTTCAGTCTTTGAAATCAATGATTGTGATTAGGGGTGCACAAGTATTGGATTGAATGAATTTTTGGT CTAAATAGAATCCAAACCAAGTTGGATCAGATTTCAAGTGTTTTTATCTTCAAATCCGAACCAAACCAAATTGATGATGT TCGGGTTGCATACTAATCTATTCAATTAGACCCATTTGCCCAATCCAATCCACACTTTTGCTATCGTATATGGTGTTGGT TCATTGATGCTATGAGCTCCGCCGGTCTCTTAATAAGTCACTTATTTAAAATTGTCTCCATACCTATCTAATAATTATCA TTTTGAACATAAAAAAATCATGTGTATGATGATTTGAATTTGTTGTCCACAGGAAATCTAGGAAATTTACCTCTTATTAT TGTCCCAGCTGTATGTAAAGAAAGAAGCAATCCTTTTGGAGATGTGGGTGTTTGCTATAGAAATGCTCTAGCATATGCTT CTTTATCAATGGCAGTATGACACTAACTTGAGACATTTGGAATTTAATTATGTTTATCACAGCGTGATATTCACATTCAT ATATTGTTTTAACACCCTTTTTATTATTATGATTCTGGTTTTTTAGCTAGGATCAGTTTACACTTGGTCTTATGTGTACA ACATTATCCGCATATATAATTCAAGCAAGATCTCCAATGAAGTCAACCTTGATGATTCCCTGAAAAGTCATCCAGAAAAC ATTTCAACATGTTCTGCAGGAGCATTGGTTACTACCCAGGATGGATTACAGACTGATCAGGTGAAGCAGCTTGAAATTGA ATGTACAATGCCTGTTGAGCCAGCAGAGGTAGTTTTACATCAGTTCTAGTGTAATTCAATTACAATTCTGCAAAATTCTC TGTATGACATAGATTTTTGACCCATTTGTGTCTCCCACGTTAATTTTCAAATGAACTTCTAAGAATTCTAGGTTTACTCA AGCAACATGCATCATCACCTACTTGTGTCAACTCCAAGTGCTAGTTCCTAATTAATTTAATTGAAATCATGTGTTGTTTT ATGTTAGAGTTGAATTCAATATATAAGAACTATTGATTCATATGAGTTGCTCATGTACAATAAGTTTTATCAGCTTTGGA TGTTGTTGAAAAGATAAGTATTAAAATTCAGGTTAGACGTAACTCTAGATCAAAAGCTACCTTAAAGTTAAGGATGTAAG GACTTATTAGGCAATCTCTAGTCAATGTGAGACTTCTCAGCAATAAGACAAACTATAACACACTTTTGTTTCCTCATACT ATTGCATTTCATGGCATACTGTGCAGATGCTCTATTCTAGTTACAATGTTGAAAGCATTTGATAGAAGTGATGATCTCAT ATTTTCAAGATTTTATAGGTGCGCAAAAGTGGGAAAATTATGAAACAACTGAAAATATTAGCTGAAAAGATCAATCTGAA GGTATTGTTTGCACCTGCAACGACCGGAGCGGTATGTAAAAGATTCTCTTATTTTTCCTTGCAGTCCCTCCTATTATTTT CATTTAACTCATTCCACAAAGAAGGAATAAAGTTTAGAATGAGGAATGATAGTTATAATATGTTAAGGACAAAGAACTTC AGTTAGTACATAGAAGTTAGTTCAGTTTTAGAAATCAGTTCTGTTTTAACTTCAGGGTACACATTAATCAAGTTCAATGC ATTATCATCAATTGATGCTTTCCTATTACAATTGTCTTTGCCTTCAGAATTTGTCTTCTTTTCTGAGTTTTGACACAGTA AAAATGTTCAACACTTATCCTCATTTGTTCAATGTTATGATCATATGGTCTAACAGTTTTAACTTAAAGTCATATCAAAA GAACATGTTGATACCTCAACAGTGTTAGATGCTTCTAAAGGCATTGTTATCTTATTTCATAATTGTTAGACTAGAACCAA CTTAGCTACATATGTATTAAAACCTTACCTGTTCTACTTAACAAAATACTTCATTCTTTCCTTATGTGTGTGCAGATTGT TGGTTTAATAATTGGTGCAGTTCCTCCATTTCGAAATCTATTAGTTGGTGACAATGCTCCTCTCCGTGTGGTTGAAGACT CGGTAATTATGCTAGGGTAAGTATATTCTCAATTGGTCAATCCATATTTACATTTGGTTACTTGGTAACAAATCAAAGTT TATGTATTTTGATTAGGTAACCACAATTATAAATTATTTCATATATACTTCCTTGATTTACAGAGCTGCAGGCATTCCAG CAATGACATTGTTGGTTGGGGCAAATCTTATTAAGGGTAAATAATCAAGAAAATTAATTTCTCAATCTTGGGTTGATTAC TTCTTGAGTTTATTATTACATTTGAAAATTAATATGAACTTTTTCCAGGTTTAAAAGGAGTAAGGAAGCAGCTTCCAGTT ATTGTTGGCATTGTTGTGGTTAGATTTATTGCCTTGCCAATAATAGGCATAGGCATTGTTAAAGGTGCAGTGCATCTTGG ATTGATCCACAATGATCCATTGTACCAGTTTCTTTTGCTGCTTCAATTTGCCCTTCCACCTGCAGTAGCTATCAGTAAGT TGTATAATTATGAGAAAAGTTCCAAACCATTTTTCCTTTTAAAAATATACTGACTTTATGAATATGGTAGGTACAATCAC TCAATTATTTGGAGCTGGTGAGGGTGAATGCTCAGTTATCATGTTAGCAACTTATTCTTGTTCTGCAGTTTCACTTACAC TTTGGTGCACCTTCTTTATGTGGCTTGTATTATAATAATTAATTAAGAGCACTGATTCAAGAGTTAAAAGTGGAATTTTT CTTAAAAGAGTTGTATTTAAATAATGCTATCAGTGTACTATTGAGTACTGTAACTTTCTGTAAAAATGTTTATAATTTTT AGATTACTTAACCATGTCTTTTAGGCCACTGATAACTTAGTAACATTCTATAATTATTTTATGTTTCAAGATCTTGCTAT CGCTTGATCTAAATCTAAAATTGCAAAAAAAAAAAAAAAAAACCCTCATCTCTTTTTCATGGGATCCATAGGAGTAGGAG GAATCGGAGGAGAGGGAGACTGTTTCTTTGCAGGTTGCTGACTTCTGCAAGTCATAAACTATCTCATACTAGCT
CDS sequence (LotjaGi3g1v0065900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTTTTGGAAGCTATTCGTTGTTGCATTAATGCCTGTTCTGAAGGTGCTTTTGGTTACTGCTGTTGGGACATTCCT GGCACTTGATCGCTTTGACATACTCAACGAGACCGCCAGGAAACACCTGAATACTATGGTATTTTTTGTCTTCGCTCCTA CTCTTGTTTGTAGCAGCCTAGCTGAAACAATAACCTTTAAGAGCTTGGTTATGTTATGGTTCATGCCGGGGAATGTTCTT CTGACATTTATAATCGGTACGGTTCTTGGATGGTTACTACTCAAAACAACTAGAGTTCCTCATCATCTTCAGGGCCTTGT GTTGGGGTGCTGTGCTGCAGGAAATCTAGGAAATTTACCTCTTATTATTGTCCCAGCTGTATGTAAAGAAAGAAGCAATC CTTTTGGAGATGTGGGTGTTTGCTATAGAAATGCTCTAGCATATGCTTCTTTATCAATGGCACTAGGATCAGTTTACACT TGGTCTTATGTGTACAACATTATCCGCATATATAATTCAAGCAAGATCTCCAATGAAGTCAACCTTGATGATTCCCTGAA AAGTCATCCAGAAAACATTTCAACATGTTCTGCAGGAGCATTGGTTACTACCCAGGATGGATTACAGACTGATCAGGTGA AGCAGCTTGAAATTGAATGTACAATGCCTGTTGAGCCAGCAGAGGTGCGCAAAAGTGGGAAAATTATGAAACAACTGAAA ATATTAGCTGAAAAGATCAATCTGAAGGTATTGTTTGCACCTGCAACGACCGGAGCGATTGTTGGTTTAATAATTGGTGC AGTTCCTCCATTTCGAAATCTATTAGTTGGTGACAATGCTCCTCTCCGTGTGGTTGAAGACTCGGTAATTATGCTAGGAG CTGCAGGCATTCCAGCAATGACATTGTTGGTTGGGGCAAATCTTATTAAGGGTTTAAAAGGAGTAAGGAAGCAGCTTCCA GTTATTGTTGGCATTGTTGTGGTTAGATTTATTGCCTTGCCAATAATAGGCATAGGCATTGTTAAAGGTGCAGTGCATCT TGGATTGATCCACAATGATCCATTGTACCAGTTTCTTTTGCTGCTTCAATTTGCCCTTCCACCTGCAGTAGCTATCAGTA CAATCACTCAATTATTTGGAGCTGGTGAGGGTGAATGCTCAGTTATCATGTTAGCAACTTATTCTTGTTCTGCAGTTTCA CTTACACTTTGGTGCACCTTCTTTATGTGGCTTGTATTATAA
Protein sequence (LotjaGi3g1v0065900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEFWKLFVVALMPVLKVLLVTAVGTFLALDRFDILNETARKHLNTMVFFVFAPTLVCSSLAETITFKSLVMLWFMPGNVL LTFIIGTVLGWLLLKTTRVPHHLQGLVLGCCAAGNLGNLPLIIVPAVCKERSNPFGDVGVCYRNALAYASLSMALGSVYT WSYVYNIIRIYNSSKISNEVNLDDSLKSHPENISTCSAGALVTTQDGLQTDQVKQLEIECTMPVEPAEVRKSGKIMKQLK ILAEKINLKVLFAPATTGAIVGLIIGAVPPFRNLLVGDNAPLRVVEDSVIMLGAAGIPAMTLLVGANLIKGLKGVRKQLP VIVGIVVVRFIALPIIGIGIVKGAVHLGLIHNDPLYQFLLLLQFALPPAVAISTITQLFGAGEGECSVIMLATYSCSAVS LTLWCTFFMWLVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 5 | 5 | - | – | |
PANTHER | 1 | 412 | 412 | 1.8E-172 | – | |
PANTHER | 1 | 412 | 412 | 1.8E-172 | – | |
Phobius | 6 | 29 | 24 | - | – | |
TMHMM | 7 | 29 | 23 | - | – | |
Pfam | 10 | 404 | 395 | 6.8E-62 | ||
Phobius | 30 | 40 | 11 | - | – | |
Phobius | 41 | 61 | 21 | - | – | |
Phobius | 62 | 72 | 11 | - | – | |
TMHMM | 72 | 94 | 23 | - | – | |
Phobius | 73 | 94 | 22 | - | – | |
Phobius | 95 | 105 | 11 | - | – | |
Phobius | 106 | 127 | 22 | - | – | |
TMHMM | 106 | 128 | 23 | - | – | |
Phobius | 128 | 146 | 19 | - | – | |
TMHMM | 143 | 165 | 23 | - | – | |
Phobius | 147 | 168 | 22 | - | – | |
Phobius | 169 | 245 | 77 | - | – | |
TMHMM | 246 | 268 | 23 | - | – | |
Phobius | 246 | 268 | 23 | - | – | |
Phobius | 269 | 287 | 19 | - | – | |
TMHMM | 288 | 309 | 22 | - | – | |
Phobius | 288 | 309 | 22 | - | – | |
Phobius | 310 | 320 | 11 | - | – | |
Phobius | 321 | 349 | 29 | - | – | |
TMHMM | 322 | 344 | 23 | - | – | |
Phobius | 350 | 354 | 5 | - | – | |
Phobius | 355 | 379 | 25 | - | – | |
TMHMM | 359 | 381 | 23 | - | – | |
Phobius | 380 | 390 | 11 | - | – | |
TMHMM | 388 | 410 | 23 | - | – | |
Phobius | 391 | 412 | 22 | - | – | |
Phobius | 413 | 413 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0065900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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