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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0067000 |
| Transcript ID | LotjaGi3g1v0067000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing family protein; TAIR: AT2G46260.1 BTB/POZ/Kelch-associated protein; Swiss-Prot: sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260; TrEMBL-Plants: tr|A0A0B2RSL0|A0A0B2RSL0_GLYSO BTB/POZ domain-containing protein POB1; Found in the gene: LotjaGi3g1v0067000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:7260601..7264198) extracted from Lotus japonicus Gifu genome v1.2.
ATTCAGCACACATTTAATCACTTTTTTGACGGGCTTGTCAAATTCTTACTCTGTCTTACACACTCTCTCACACACAGATA ACCTCTTCGTCTTCCCCTCCAAATCCAATTGTTTAGGGTTTGATCTTGTAGGCAAGGAGGGTGAGAAGAAGCATTCAAAA TTGGTGATGGAGTCTTCTTCTTCTTCTTCTTGTGAACTCAATTTTACCTTCGCTTTCAACGATGTGCATTACTCCGATAA GCTTCTCCGTATTGAGATCATTCCCGACCCGGTTTGTGCTTCATCTCAACCCAAATCAGATCATTACTCCGACAGGGTTC GCCGCCACCGTAAGCGGAAAGGCCGCCGAAACTTCATCATCAACTCTGCTCGCCACCGTAAGAGGAAACTCCAAAAAGGT AACCGGTTGATGGATTCTCATATAATTTCATATAATTTCAGGGTTTTTTTTTTTGTGGGTTTTGAGAAGTTTATTGCAGT ATAAGTGATTCTGATGGATTCTAAGTGATTATGTGCTTGTAGTATAAGTCATTCTCAATGTGTGTTCTGTTACTTGCAGT TTTGAAGGGGAATCAACCTGATATGGATGATGGTAAGCGGAAACGCCGCCAAAACTTCATCATCAACTCTGCTCGCCACC GTAAGAGGAAACGCCAAAACGGTAATTTCCGTCATATAATGTAGTATAAGACAACTTAGTAAGTGATTCTCATATACTCT GAGTGTTTTTTTGTGAAATTTATTGCAGTATAAGTGATTCTGATGGATTCTAAGTGATTCTGTGCTTGTAGTATAAGTGA TTCTCAATGTGTGTTCTCTTACTTGCAGTTTTGAATGGGAATCAACCTGATATGGATGATGGTCAGCGGAAACGCCGCCA AAACTTCATCATCAACTCTGCTCGCCACCGTAAGAGGAAACGCCAAAAAGGTAACTGAGGGTTTTGAGAAATTTATTGTG GCTGTGTTTGTCTAAAGTGTGCAACTTGTCTATTTTCTCACGCCTTACCCTTCTCTTACTTGCAGTTTTGAATGGGAATA AACCTGATGATGAGACTTGTGTAATCCCTTCTTCTGGTATACTTAATTTCTCTATAATGTACCTATTTCAATTTTATAAA AGCATGTTCTTTCTGCTCATTTAACACTTTGAGTTTTCGCATGGTTAATAGGCGATGAAGTTGCAAACATCAGTGATTCA AATTGCTCTGCAGCTACCGTTGTTCGAGTTAAAACACTGCATATCAGTTCTCCTATACTAGCTGCTAAGAGCCCTTTCTT TTTTAAGGTGGATAAAGACCCCTTCTTTATAATAGTTCCGCCAAAAATAATATTTGAGCAGCACTAATTTTTGTTTTTAA TTTTTGCAGCTTTTCTCAAATGGGATGAGCGAGACAAAGCAAAGACATAAGACAAAGCAAAGACATATCTCCCTCAGGAT TTATGCATCTGGTAACTTTTTATATCTTTACTATCTGATCATTTTAATTTTCATCAAATAGTCGCCTAAATGCCATATTC TTTTTCATTACAGAAGAAACTGCTTTCATGGAGCTACTGCAATTTATGTATAGCAATACCTTGAATATTACGACAGCACC TGCTTTGCTGGATGTGCTTATGGCTGCTGAAAAATTTGAAGTGTCTTCATGCATGAGATACTTGATAAATTCGCCTATGA CACCTTACTCTGCATCACTCTACCTGGAGCTTCCTCGCACCGTTGATGCAGTTCTACCGCTGATTGATGCGGCAAAGCAG TATCTTGTGGGTCGATACAAGAATATAACCATGGAAAGGCAAGGCTTTGCATTTTATTTAAGAGTTTAATTTTTATGCAC TGAATACCCCGTCAACCAATCAGATTTCAAGGATGTGAGATGAGAAAATCTGTTTATTAAGTTATTTCCATTGCTCTTAG GGCATACCAGAGAGGAACAAACCATAGGTTCAAAGAAGGAATGGGTATTTGTTTGTGTGTGTTGGATCTAATGTTTGAAT TTAAGTGGAAGGCTTTTAGTTCTTGTCAATCAACTTCCTTCATGTTATAAACATTTGAGAGACTTTTCTATTATGGGATT CCATTAAGTGTCTTTGGCAAAACATCTTTTTCTCTTCGATGGCATCATTGATTCTAATTGTTTATTCTTTTGAAAAACAG TTGTTTCTTTTGTTGTTATTCTTCATTGTCTTCATCTCAAATTTTTTAACACTAATATTTTTATATATCTTCAGCTTTCA AGAAGAGCTTATGGCCTTGCCTCTTTCTGGAATAGTGGAAATCTTGGCTAGTGATGATCTCCAGGTTGAATCAGAAGATA TTGTATATGACTTTGCATTAAATTGGGTTAGACAAAAGTACAAATGCCAGGAAGAAAGGAGAAAAGTTATTCATACAGAG CTTGCGCTTTTAATTCGCTACCCTTATATGACACGCCAAAAGCGTAAGGACCTTATAATTGACTTTGAAAAAGAGGGTGT ATTTAAGCTTTTACTCCAAAAACTAGAGAATCACTTTTGCATACTGTCAGCGGGAAAGCACTTTCCCCTGAACCGTTGTT GTGTGCCAAGGGCATATAAGGGTGTGATGCACATGAGTTTGACACGAGAAGATTGGGTCACCATGTTCCCAACTGGCAAT TTGTTTTCTGAGGCCTTCCCTTTTGGTGGACGAATGTTTGTTCTATTAGCATCATGCTCCGAGGCGAAACATGATTCTTC CGATGGCTTTGGGTTAGCGGTGGGAATGAGGAAAGGCTGCAAAGGGGGAAGCATTGATGCAGACTTTGAACTTGCTGTAA TGTTGAGGCCAACAAAGAAGTTTGCAACCATGTACACTTCCAATTTCACATTTAGCCCAGGGAACCTTTGGGGCTCTCAA CACCTCTTTAATGTTCCGTGGACTTCGTTCATTGCTGAGGACAGTCCATTCTTCATCGGAGGTTCTCTCCACCTTAGGGC CGAGCTCACAATTAGCCGAGCTGATAATTAGACATTGATCTTAACTACAAGTTACAAGGCCCATGCATTGATAAATGGTG GTTTTAATTTATTATGTAAACATTTGAAAAATAATTATTATTTAAAATATGAGATATATTAGGATGATTTTTGTACGAAC AACTATAATTATTTGTCCATTATATGGAGGTGATGGCATTGAATCAAAGCTAAATTAGGATGTTTTTCATACTTGCTATT TGAATGGACTATGCAACTGTTGTTGTGCCCCCACAGGATCTGTAATTTTCTGCAGAAATTTGGCTTTCTGTTTTGCTGGT TTCGGTTGTGTTCTTGTTTGTCCAGGATGCCATATAAGTAGCGGGTTTGGAGCATGAGTTGTGTGTAAAGGGCTCAGGGA ATTGTTGTGGGTTCAGGGAATTGTTGTGAGTTTTTGGGGTGAGATTATTGTTTCTTGTTTTGCCAATCATTGGTTTTCTT ACTGCTCGTGATCTGGTAGGAGTGGGTGACGTAGGTTTTGAATTTGGGGGTGGATTGTTACCATTGGTTTTGTGTGGGCT TTGTGGGGTTTATTTTTCTTTTTCTTGGTCTGTTTTATGTTTTCTTTCTCTGTATTAAGGGTTTGAATACTTCTTGTA
CDS sequence (LotjaGi3g1v0067000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCTTCTTCTTCTTCTTCTTGTGAACTCAATTTTACCTTCGCTTTCAACGATGTGCATTACTCCGATAAGCTTCT CCGTATTGAGATCATTCCCGACCCGGTTTGTGCTTCATCTCAACCCAAATCAGATCATTACTCCGACAGGGTTCGCCGCC ACCGTAAGCGGAAAGGCCGCCGAAACTTCATCATCAACTCTGCTCGCCACCGTAAGAGGAAACTCCAAAAAGTTTTGAAG GGGAATCAACCTGATATGGATGATGGTAAGCGGAAACGCCGCCAAAACTTCATCATCAACTCTGCTCGCCACCGTAAGAG GAAACGCCAAAACGTTTTGAATGGGAATCAACCTGATATGGATGATGGTCAGCGGAAACGCCGCCAAAACTTCATCATCA ACTCTGCTCGCCACCGTAAGAGGAAACGCCAAAAAGTTTTGAATGGGAATAAACCTGATGATGAGACTTGTGTAATCCCT TCTTCTGGCGATGAAGTTGCAAACATCAGTGATTCAAATTGCTCTGCAGCTACCGTTGTTCGAGTTAAAACACTGCATAT CAGTTCTCCTATACTAGCTGCTAAGAGCCCTTTCTTTTTTAAGCTTTTCTCAAATGGGATGAGCGAGACAAAGCAAAGAC ATAAGACAAAGCAAAGACATATCTCCCTCAGGATTTATGCATCTGAAGAAACTGCTTTCATGGAGCTACTGCAATTTATG TATAGCAATACCTTGAATATTACGACAGCACCTGCTTTGCTGGATGTGCTTATGGCTGCTGAAAAATTTGAAGTGTCTTC ATGCATGAGATACTTGATAAATTCGCCTATGACACCTTACTCTGCATCACTCTACCTGGAGCTTCCTCGCACCGTTGATG CAGTTCTACCGCTGATTGATGCGGCAAAGCAGTATCTTGTGGGTCGATACAAGAATATAACCATGGAAAGCTTTCAAGAA GAGCTTATGGCCTTGCCTCTTTCTGGAATAGTGGAAATCTTGGCTAGTGATGATCTCCAGGTTGAATCAGAAGATATTGT ATATGACTTTGCATTAAATTGGGTTAGACAAAAGTACAAATGCCAGGAAGAAAGGAGAAAAGTTATTCATACAGAGCTTG CGCTTTTAATTCGCTACCCTTATATGACACGCCAAAAGCGTAAGGACCTTATAATTGACTTTGAAAAAGAGGGTGTATTT AAGCTTTTACTCCAAAAACTAGAGAATCACTTTTGCATACTGTCAGCGGGAAAGCACTTTCCCCTGAACCGTTGTTGTGT GCCAAGGGCATATAAGGGTGTGATGCACATGAGTTTGACACGAGAAGATTGGGTCACCATGTTCCCAACTGGCAATTTGT TTTCTGAGGCCTTCCCTTTTGGTGGACGAATGTTTGTTCTATTAGCATCATGCTCCGAGGCGAAACATGATTCTTCCGAT GGCTTTGGGTTAGCGGTGGGAATGAGGAAAGGCTGCAAAGGGGGAAGCATTGATGCAGACTTTGAACTTGCTGTAATGTT GAGGCCAACAAAGAAGTTTGCAACCATGTACACTTCCAATTTCACATTTAGCCCAGGGAACCTTTGGGGCTCTCAACACC TCTTTAATGTTCCGTGGACTTCGTTCATTGCTGAGGACAGTCCATTCTTCATCGGAGGTTCTCTCCACCTTAGGGCCGAG CTCACAATTAGCCGAGCTGATAATTAG
Protein sequence (LotjaGi3g1v0067000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESSSSSSCELNFTFAFNDVHYSDKLLRIEIIPDPVCASSQPKSDHYSDRVRRHRKRKGRRNFIINSARHRKRKLQKVLK GNQPDMDDGKRKRRQNFIINSARHRKRKRQNVLNGNQPDMDDGQRKRRQNFIINSARHRKRKRQKVLNGNKPDDETCVIP SSGDEVANISDSNCSAATVVRVKTLHISSPILAAKSPFFFKLFSNGMSETKQRHKTKQRHISLRIYASEETAFMELLQFM YSNTLNITTAPALLDVLMAAEKFEVSSCMRYLINSPMTPYSASLYLELPRTVDAVLPLIDAAKQYLVGRYKNITMESFQE ELMALPLSGIVEILASDDLQVESEDIVYDFALNWVRQKYKCQEERRKVIHTELALLIRYPYMTRQKRKDLIIDFEKEGVF KLLLQKLENHFCILSAGKHFPLNRCCVPRAYKGVMHMSLTREDWVTMFPTGNLFSEAFPFGGRMFVLLASCSEAKHDSSD GFGLAVGMRKGCKGGSIDADFELAVMLRPTKKFATMYTSNFTFSPGNLWGSQHLFNVPWTSFIAEDSPFFIGGSLHLRAE LTISRADN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 92 | 89 | 8.5E-141 | – | |
| PANTHER | 4 | 92 | 89 | 8.5E-141 | – | |
| MobiDBLite | 37 | 158 | 122 | - | – | |
| MobiDBLite | 49 | 77 | 29 | - | – | |
| MobiDBLite | 78 | 95 | 18 | - | – | |
| MobiDBLite | 96 | 111 | 16 | - | – | |
| PANTHER | 98 | 565 | 468 | 8.5E-141 | – | |
| PANTHER | 98 | 565 | 468 | 8.5E-141 | – | |
| MobiDBLite | 131 | 146 | 16 | - | – | |
| Gene3D | 168 | 288 | 121 | 4.4E-13 | – | |
| SMART | 174 | 276 | 103 | 7.8E-9 | ||
| ProSiteProfiles | 174 | 249 | 76 | 13.591 | ||
| Pfam | 174 | 269 | 96 | 1.3E-10 | ||
| CDD | 179 | 263 | 85 | 1.46335E-12 | – | |
| SUPERFAMILY | 183 | 271 | 89 | 6.51E-10 | ||
| SMART | 285 | 392 | 108 | 4.3E-4 | ||
| Gene3D | 294 | 401 | 108 | 1.7E-10 | – | |
| CDD | 297 | 385 | 89 | 7.67365E-13 | – | |
| Pfam | 313 | 385 | 73 | 9.8E-9 | ||
| SUPERFAMILY | 450 | 563 | 114 | 4.51E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0067000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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