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LotjaGi3g1v0070000.1

Overview

Field Value
Gene ID LotjaGi3g1v0070000
Transcript ID LotjaGi3g1v0070000.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Aminotransferase like protein; TAIR: AT1G80600.1 HOPW1-1-interacting 1; Swiss-Prot: sp|O04866|ARGD_ALNGL Acetylornithine aminotransferase, mitochondrial; TrEMBL-Plants: tr|K7L145|K7L145_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0070000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:7615377..7619682) extracted from Lotus japonicus Gifu genome v1.2.

AATCAGTCTTATCCACTCCAGTGTATTCCATTCTGTAACCAAATGCGGACAAATACAATGAATCTTTTCCTTCCTTCAAT GTGGTCTTAAACTCGCTATCAACTCATTCACTCACACTCTCTCAATTGTGAAGTCAAAACCCCACTCGGTTCAGTTCCAA GTTGCCAACTTGCTGCAGATTCGATTTCACTCTGAAGGGTATCGTTTCTTCTCTATCAATGTCGTCTAATCCTTCTTCAT GCTTTTCTTTTTCTGCAGTAATGTGGGGTGTTACAAAATAGCATTGGGGAATCAGGGTTTTGAATTTTGGTTAATTTTGT GTTATTTTACAGTAATCAATCACATGCTCAAAGATGAACTATAGTGTAGCAAAATTGTGCTTAGGAAACTGCATGTTTGG ATACACTGTGGAAAACCACCATGAAACCAAAACCGCGGTTGACAGAAGCAACTTCCGTGCGCTTTTGCAACTGTCCACCA TATGACTTTGGTCTCACTGTGATTTTCCGGTATCCAAACATGCAAATGGGGTTTCTGTACTTATTATAAGCTAATTGTTT GCCTATGTATTTTTGGTTTAGAAAAATTGTAGAGGGTGAGAATCAAGCCATTTGTGGGACACAATGAGTACAGTTCACAT TTATCTGAACCATTCAATTTCTCGATCAGTATACAAACTTGGGTTCAATTTGGGGAGAGAGAGCGCTTTGATAGGAGGAA GACAATTTACTCAAATCAATAGCCGGAGGGCCGTGAGTGCTTGTCTTAATGTGGATGTTGGTGCAGCTAATGCTGCGAAT GTAGCATTGGAGAAGACTAAGAAAGTGATGGAGATGGAAGGGAAGTATTTGGTGGGGACATATGCAAGAGCACCGGTTGT GCTTGAGAGAGGGAAAGGTAGTAAGGTGTATGATGTTGAAGGGAAAGAATATCTAGATTTGAGTGCTGGGATCGCTGTTA ATGCATTAGGGCATGGGGATGCAGACTGGTTGAAAGCTGTTGTGGAGCAAGCTGGTACCCTTACTCATACCAGCAATATT TTCTACACAATACCTCAGGTTTGAACATGTCATTATTTGTCTTTTTGGAGTTATATCTTATTTATCTGCGTTTGCATCAA ACGCAGATAAATAATGGAAAACATTATGCTAACCACTCAATACCTCAGGTATGGGCATGTGGTGATTTATCTGTTTGTTT CTGAGTTATTTCTAAATTTTTTTCAATTTGCTTAGTAATCATGGAACTTTTTTGAATAAACCACTGTTTTTTTTTCTGGA TTTGTTTGAGTTAAAACACTAGTCTACTTCGAAACATGTAAGCAGGGCAACAAATACGCCATCTGTTTCATTAGTTGTTT ATTATGGATGATTCAAACTTTCATACTTTTTGCCTAATTTTGTATTTCTTTGAACTGTGTAAGGTATACACAGCCTTATA AATGCTTTTATAAGGAATTTATAAAATTATTTACGATTCCCTTAATTCTGGCATGTGTCAACTATTATTTTGGCTTAAAG GGTGATTGTAGAAGTACCGTTTTACAAAATTTACAATGATGAAAGCTTAGTAATGACAAGGTATGGGTGAGCAGTTGTGT GCACTTATTTGTTTTTAATGGTAAGAAATAGTTAGCAATTTTAAGAATGTACATGGCAAGAAAACTTTAGATATGATTGA GGGAACATAGTTTTCTGAATGGGCAATCTACCTTAGCTTCTGAGAAAATATTGTGGATTAAAGACATGTTTTTGAACTAT TTACTCAATGAAGAAAAACTCGGTTATCATTATCAAGCATTATATGACCTTCAGGAGTAAACCCTGCCTCTGATAGAGTT TGAAATTGTGTTTCGGATATTTAAGGTAAAGAGATTGCCATTATCAAGAGGAAGGAAAACTGTTTGTTAATATATCTGCT TGGTCCAATAAGTATATGGCTGTAACATTATGATGATGATGCATGTCTATCTTACAATATTTTCGCATCCATTCATTTGT AATTTGTTTAGTTGTTTCATTATGCTTAACTTTATTCATATCTTGTAGCAGCGCGTTCTGTGTCGGAACATTGTTGCATT GCACCTTTATCTGTTTTCATAATTATTTTGGTACTGGATGCAGGTAGAACTTGCAAAGCGTCTGGTGGCTTGTTCCTTTG CCGATCGTGTATTTTTCGCAAATTCTGGAACTGAAGCAAATGAAGCGGCTATTAAATTTGCAAGAAAGTATCAGAGACAC ATAACTACTGATGGGAAAGTGCCAGCAACAGAGTTCCTAGCTTTTAGTAATTGCTTTCATGGAAGAACCATGGGTGCCCT TGCTTTAACAAGTAAAGAGCATTACCGAGCACCTTTTGAACCTGTTATGCCCGGAGTAACCTTTTTAGAGTACGGAAATG TGCAGGCTGCAACAGAGTTAATTAAGCAGGGCAAGATTGCTGCAGTTTTTGTGGAACCCATCCAAGGAGAAGGTGGAATT TACAGTGCTACAAAAGAATTTCTAGAGTCTCTGCGCAATGCTTGTGATGAAGCTGGGGCACTTCTTGTGTTTGATGAGGT ATCCACTCTCTAAAGTTAATATTTAATATGGCTGTATAATAGTGAGAAAGTGCCTTTTAAACAGAAATTTGCATTTGTAA CAGAGAAGACACAAAACTGGTTTCCACCTTTATATATTTGGGTTAATCCTCTAATTGGTCCCTGTGGTTGTGTGGCCGTC TGAAATTAGTCCCTCCCGTAAAATCTAAGTCCTCGCGTTTGAAAAAGTGTGTGTAGCAGGTCCTCGCCAGAGGGACTAAT TTCCACACACTTTTCAAACGCGAGGACTTAGATTTTACGGGAGGGACTAATTTCAGACGGCCACACAACCACAGGGACCA ATTAGAGGATTATCCCTATATATTTCTTTAGTTTCTTTTTGATGCTTTGTAAAATAGTCTTGGATCTTACTCTCGATAAC ATTGTCGCTTGAAATGGTTGGTTAGTTTATCTTTGCCTTTTTTCAATTACTATTATCAATTGAAAGGTACCGAGATCAAG ATTGTCAAATTAGTTAATCTGCAGAGATTTATCATTTCATTGAGTGACAAAGTATAGCCTATTTTGAAGTATATTTATAA CATGCATTCTGTGATTTTGCAGGTTCAATGTGGTTTAGGTCGAACAGGGTATCTTTGGGCCCATGAGGCATATGGTGTCT TCCCCGATATGATGACCCTAGCCAAGCCTCTTGCTGGAGGCTTACCTATTGGAACCGTCCTGGTGACTGAGAGAGTTGCT TCAGCTATCAAGTACGGCGACCATGGAAGCACTTTTGCTGGAAATCTTCTTGTTTGCAGTGCTGCTCTTGCTGTATTGGA TAAGATATCAAAACCTGATTTCCTGTCTTCTGTATCTAAGAAAGGCCTATACTTCAAAGAACTACTGAAGCAAAAGTTAG GAGGAAACCGGCACGTGAAAGAAATTCGCGGTATTGGGCTAATCATGGGAATTGATTTAGATGTACCTGCCTCACCCCTT GTAGATGCGTGCCGAGATTCTGGTCTTTTAGTATTAACTGCTGGAAAAGGAAATGTTGTCAGGCTTGTTCCACCATTGAT CATAACAGAGCAGGAGCTTGAGCAAGCAGCTGATATTCTATGCCAAGCTATATCAGTTCTTGATTAGAGTAACTAAAACT AGGAGTTTTGCTTGAAGTCTTGGATGTAAAAACCTTGAACTTCCTTTCCCTGAAGGTGTTATTACCGTGGTAAGAATAAT TTAGCAAAGCATGCATCATATTTCTTGAAACAGTGGATGGAAGATCCTCTGTATTCTCTGTGACAAATTTATTTATGGTG TTTTTCATCAGATTGAACATATCCAAGGGATTTGAAAATCTTTTCCTTTACATGGGTTGGTTTTGAATACCCCTACTCTT GCCCCATCATAACATAGTTTGAGCGTCATAGTTATATTCTTTTCTTATTCATTGATTACCACATCATTATCCTCATTTGG TTCTTATTGCTCGAGTTTTGCCTTCAAATTAATAATTTTCTCCATTATTTGAATTTTAACTATCTCTTTAGAAGACTGTT ATTTTATTTCGTTGTTCTCTTCATGTAGATAATGCATCACTTGTAACTATAACCTTGTGTCTTTCAAAAAAAAAACTATA ACCTTGTGTGTTGTGGGATTGCACGGGCGATATCTCTTAATATCACATGGGTCTTAGGATCCTCTTATATCACATGATAG TGTTACAGGAAATTTCGTGTCTATCATTTTTATAAATATTCAAATGGTCTCACATGTTTAATAGGT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0070000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGTACAGTTCACATTTATCTGAACCATTCAATTTCTCGATCAGTATACAAACTTGGGTTCAATTTGGGGAGAGAGAG CGCTTTGATAGGAGGAAGACAATTTACTCAAATCAATAGCCGGAGGGCCGTGAGTGCTTGTCTTAATGTGGATGTTGGTG CAGCTAATGCTGCGAATGTAGCATTGGAGAAGACTAAGAAAGTGATGGAGATGGAAGGGAAGTATTTGGTGGGGACATAT GCAAGAGCACCGGTTGTGCTTGAGAGAGGGAAAGGTAGTAAGGTGTATGATGTTGAAGGGAAAGAATATCTAGATTTGAG TGCTGGGATCGCTGTTAATGCATTAGGGCATGGGGATGCAGACTGGTTGAAAGCTGTTGTGGAGCAAGCTGGTACCCTTA CTCATACCAGCAATATTTTCTACACAATACCTCAGGTAGAACTTGCAAAGCGTCTGGTGGCTTGTTCCTTTGCCGATCGT GTATTTTTCGCAAATTCTGGAACTGAAGCAAATGAAGCGGCTATTAAATTTGCAAGAAAGTATCAGAGACACATAACTAC TGATGGGAAAGTGCCAGCAACAGAGTTCCTAGCTTTTAGTAATTGCTTTCATGGAAGAACCATGGGTGCCCTTGCTTTAA CAAGTAAAGAGCATTACCGAGCACCTTTTGAACCTGTTATGCCCGGAGTAACCTTTTTAGAGTACGGAAATGTGCAGGCT GCAACAGAGTTAATTAAGCAGGGCAAGATTGCTGCAGTTTTTGTGGAACCCATCCAAGGAGAAGGTGGAATTTACAGTGC TACAAAAGAATTTCTAGAGTCTCTGCGCAATGCTTGTGATGAAGCTGGGGCACTTCTTGTGTTTGATGAGGTTCAATGTG GTTTAGGTCGAACAGGGTATCTTTGGGCCCATGAGGCATATGGTGTCTTCCCCGATATGATGACCCTAGCCAAGCCTCTT GCTGGAGGCTTACCTATTGGAACCGTCCTGGTGACTGAGAGAGTTGCTTCAGCTATCAAGTACGGCGACCATGGAAGCAC TTTTGCTGGAAATCTTCTTGTTTGCAGTGCTGCTCTTGCTGTATTGGATAAGATATCAAAACCTGATTTCCTGTCTTCTG TATCTAAGAAAGGCCTATACTTCAAAGAACTACTGAAGCAAAAGTTAGGAGGAAACCGGCACGTGAAAGAAATTCGCGGT ATTGGGCTAATCATGGGAATTGATTTAGATGTACCTGCCTCACCCCTTGTAGATGCGTGCCGAGATTCTGGTCTTTTAGT ATTAACTGCTGGAAAAGGAAATGTTGTCAGGCTTGTTCCACCATTGATCATAACAGAGCAGGAGCTTGAGCAAGCAGCTG ATATTCTATGCCAAGCTATATCAGTTCTTGATTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0070000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSTVHIYLNHSISRSVYKLGFNLGRESALIGGRQFTQINSRRAVSACLNVDVGAANAANVALEKTKKVMEMEGKYLVGTY ARAPVVLERGKGSKVYDVEGKEYLDLSAGIAVNALGHGDADWLKAVVEQAGTLTHTSNIFYTIPQVELAKRLVACSFADR VFFANSGTEANEAAIKFARKYQRHITTDGKVPATEFLAFSNCFHGRTMGALALTSKEHYRAPFEPVMPGVTFLEYGNVQA ATELIKQGKIAAVFVEPIQGEGGIYSATKEFLESLRNACDEAGALLVFDEVQCGLGRTGYLWAHEAYGVFPDMMTLAKPL AGGLPIGTVLVTERVASAIKYGDHGSTFAGNLLVCSAALAVLDKISKPDFLSSVSKKGLYFKELLKQKLGGNRHVKEIRG IGLIMGIDLDVPASPLVDACRDSGLLVLTAGKGNVVRLVPPLIITEQELEQAADILCQAISVLD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF000521
33 225 193 4.6E-11
IPR005814
PANTHER
PTHR11986:SF116
35 464 430 2.4E-235 –
PANTHER
PTHR11986
35 464 430 2.4E-235 –
CDD
cd00610
69 460 392 2.32822E-154
IPR005814
Gene3D
G3DSA:3.90.1150.10
74 452 379 6.3E-143
IPR015422
Hamap
MF_01107
75 463 389 66.727
IPR004636
TIGRFAM
TIGR00707
75 460 386 3.1E-144
IPR004636
SUPERFAMILY
SSF53383
76 460 385 1.06E-122
IPR015424
Pfam
PF00202
83 460 378 3.2E-113
IPR005814
Gene3D
G3DSA:3.40.640.10
119 370 252 6.3E-143
IPR015421
PIRSF
PIRSF000521
233 463 231 1.5E-35
IPR005814
ProSitePatterns
PS00600
286 323 38 -
IPR005814

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0006525
Biological process Arginine metabolic process The chemical reactions and pathways involving arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
Subterm of
GO:0008483
Molecular function Transaminase activity Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
Subterm of
GO:0030170
Molecular function Pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0070000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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