Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0073600.7

Overview

Field Value
Gene ID LotjaGi3g1v0073600
Transcript ID LotjaGi3g1v0073600.7
Related isoforms 6
Lotus japonicus genome version Gifu v1.2
Description Ribose-phosphate pyrophosphokinase; TAIR: AT2G44530.1 Phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9XG98|KPRS1_SPIOL Ribose-phosphate pyrophosphokinase 1; TrEMBL-Plants: tr|A0A072TKF0|A0A072TKF0_MEDTR Ribose-phosphate pyrophosphokinase; Found in the gene: LotjaGi3g1v0073600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:8096998..8101566) extracted from Lotus japonicus Gifu genome v1.2.

AATAGGATATTGGTTGCTACATGTACCTGGAGCTTTCCTTTCTGAAAATATTGGTGAAAACATATCATCTGAAAATGAAA TCCGAAAAATAAGCAAAACAGCATATTTTCCATTTCATTTTCATTTCTCTTTTTTTTATACAAAGAGGAAATAATGTTTT GGTCCTTATGGAAAGCATATTGTACTTTTTGAACATACTTTGATTGTTAAGTGTTGACTAATATCTGAAATCTTATATTA TGCACCAAGTAGCCTTTAATTATTTACTGAAATGTCTGATTAACTTTTACTTAAATAGGAAATTGCATGCTACATGGGAC TGGAGCTTGGAAAAATAAAGATAAAACGTTTTGCTGATGGTGAGATATACGTTCAGCTGCAAGAAAGTGTCAGAGGTTGT GATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCCAATGAAAATCTTATGGAGCTGCTAATAATGATCGATGCCTGCAG GAGAGCTTCAGCCAAAAATATTACAGCAGTCATTCCCTATTTTGGATATGCTAGAGCTGATAGAAAGGTCTGCTTGTCAG TTTGATTACATATTCATTATATTTTTGTTACTTGTGATTGTGATGACATTTTATGCTTCTTCAAATTCCACCATATTTTT CTTGTGTTACATGCGTATTGTGATTTTGCTACTATTTTGCACATATGTGGCCCATATGGATACAATTATCTGCAAACCAG TGCCATTTTCCCCGAAAACATAGGATGCAGTTAAGATTGAGAAGATAGAACATATTACATAACAATATTTAAGAGAGATT TGAATATGTAAAACTTATTACATGCTACATAATCATCTGTGAAGCTATTTATCCCTTGAATATGACACATTGTCTTAATT ATTGCATTTGGTAGCATCTGCACTGATAACCACCTCCCTTGGCATTATTTTCTTTGACTCTTTCTGTCAATCACGAACTC TCCCAAAAGCTTAACTTATTTGGTGAAGACTTATACATAACACTTTCCTTTGATAGTTGATGAGAAATTACGCAAAATAT ACACTTGTGACTGTATCTTCCAGAACCACAATAAGGGAAAAAGTTTACAAAATACATTCCAATGAGTATCAGTATGACAG TGTAAGACATACATGTAATAAGGATGTACAAGCAACTCTTGCTTTGGATATCTGCGTATCATAGTTTGGATATAAAGATG ATGGATGATATTGAAGTCATTAACAACATAAATTTTTAGCCCTAAAAGTTGCTACCTAATGTTACTTGCACATTGCTACA TAAAAGTTATTTCACAGCCAATGTTGATGATATTAACTGAAAATATCTGACATTCTAGTTTAGTTTAGATTAAATATGAT CTGCAACTACTCTTGCAGACTCAAGGGCGTGAATCCATTGCTGCCAAGCTTGTAGCAAATTTGATTACTGAAGCAGGTGC AAATCGTGTTCTTGCTTGTGACCTCCATTCTGGGCAGTCCATGGGCTACTTTGATATTCCAGTTGATCATGTGTATGGAC AGGTAACGGAAAACAGTACTTGGGTGTGTCACTAGTGTAAACTAGCGTGGAAAATTAAAAAGCATATGTGTTCTATTAAA CATAAACAAACATGTGATATGTTATCTATTTGTAATAATTTACTGCAAAAGAGTGTGTTGTTAGCATTTCTCGTAAATAA GTGTTGATCTTGATGCTATTTGATGATGATTGTGATTAGTGGTGGTAATGAGAATTGTCTGGCTTCTTCTGCAATATCAT GTCTACAAGATATTCATTAAAGTCTAAACTTGGATGTCTCTTGAAAAGACGGATTTGTTAATTATACGGTTAACAAATTG ATATTCTCAAAGGATTTTGGTAATCTGCCCCTATAGATATGATGGGTGTGAGAGCATTTTCATAAATTTATTATTTTTGT AATCTCCATGGTCGAGATGTCTAGTCCTGGGTGTGAGGGGTGTGTTAGGGTCACGTTGACTAGAGATATGGCTGAAAAGT CTTTGTAAAGGTTACGACAATACAAGGTTTTGGACTTTTGGGGTAGAGTTAGGCCTAGCCTAAATTCTCTATATACGATA ATATATGATTTAGCATTACAAATGGTACCTGCCATTTTCTGTAACAATATTTGAGATCTCCTAATGATTTATACAGTTTG CGTTGAATTATATTTTTATGAATTTTGCAGAAGTTCTTACATTGAAACTGTCAGTGTAATTTGGTTCAGTGATTAATCAT TTACTCTTTTTTTGTCACTACCAGCCTGTTATACTTGATTACCTTGCCAGCAAGACTATTTGTTCAGATGATTTGGTAGT TGTCTCACCAGATGTTGGTGGTGTTGCTAGAGCACGTGCTTTCGCCAAAAAATTATCTGATGCTCCTTTAGCTATTGTTG ATAAAAGGCGTCATGGGCATAATGTTGCTGAGGTATGATCTCTGCTCTTCTTAAGTTTGAGTTTAGATATCCTGATTTAG ATTAGTTGCCAGCAGGGTTAGGGATGGTTCAACCTAATTTGATTACCATAATGGTTCTGCAGTATAAAATGTATAATCCA AATTGGTAACAAGGATTGCTCATTGTTTATATGGAACTCTGATTTGGGTGTTAAAACTAGTCTAGAAGGATAGCTCATTG TTTATATGGTTGGTCTGGTAACTCTGATTTGGGTGTTCAAACTAGTCTAAACTACTAACAGGGATAGCCCATTGTTTATA TGGTTGGTCAGGTAACTCTGATTTGGGAGTTAAAACTAGTCTATGACCACTGAGGGGTGACCATTGAGCACAGTTGTTCC CTTAATATAAAGCATTTTATATTTATAGTCATAAATGAAGCACCTTTTGCTATCTGATTGGGTGAATCTCACATTTCAGG TGATGAATTTGATAGGTGATGTGAAGGGAAAGGTAGCAGTTATGGTAGATGACATGATTGATACTGCTGGTGAGTTCATG TGTAAAACTCTTAATGTGCTAGTGCAATAATGGTAGTTTGTCTCTGACCCTATATTCAGTTAGATTAGTGCCTCAACCTC AAAACTCGCATGTTATGTCTCTCTCTCTCTCTCTCTCAATTGGTTTCAATTTTTTTTCTTGGTAAATAGTACAGCATTTC TGCTTAATCATACACGAAGTGATGATATATGGTGTAGAAAAACTGGCAAACTGTATGATTATAGGTTAAAAAGGAATCTT TATTTACTTCAACAAAGAGACAGTTTTATGTTTAAGAAGTAAAGTTGTTGGTCTCTTTTGCTTGGTCTTCAATCACTTCT GATAAAAAAAAAATATACTTTACATACATATCTTTCTTATTGGTGCTATTTTTGAGTTCTTAACTCCTTAACTGTCAAAG TTACTTACAACAGAACAGTGTATAATATTTGATTTTTTGTTAATATGCAAATCTAAATTAATTAGGTCCTCATCCTCTGA TAATTAGAACTTATGATAGAATTGGACCAGAAACTGAGAGGAAAGAAATGTCCTCTTATGGAAAAAGACTGAAAATGGGT ATACAAGGTGCTGGCATTCAAGAGGCTAGTACTCTCCCACAACTTAATTACTTTCCAGATAACGTCCCTAACAACTTCCT CATTCTTCTTATAGGAATGCTAACTAACAATTGTTTCAACAACCTAACTAACAGTTAGAATGGCCTATTAATTCAGGCCC AAACTAACAACTAAGTGAAATAATCAAGTGATATTTAAAAGTCTATGCCCAAACTCTTGTACATGATGAGGAGGAGAAAA TTAAGTGAAATAATCAAGTGATATTTAAAAGTAAATAATCAATCTGTAAAATAATCTAACTCAATGCATGACATAACATT ATGGCTAGACTGACGCATGACTAGACACCACCTAGTTGGAAAAAGGCTTGGTTGTTATTTTGTTTCTGTATTACTAGCTA AGTGGGGGAACATAGCACTTGAAAAAAAAATCAATGTCCTAATTAATTGACTTTTTATAGGAACTATTAGCAAAGGTGCA GCTCTATTGCATCAAGAAGGTGCTAGAGAAGTCTATGCATGCACTACTCATGCTGTTTTCAGGTATACATTGGGCTTTAA ATTCTGTAATAATTTATTTCAACTTTGGTTTGCACTGAGGCACTTTAACCACGTCAATTATGGTGAATCTGCTACTGAAG CCAATTGCAATCAGATTTTTCTCTGTGAAGTTTTAATTCAGCTCTCTGTTCATTATTTTAGCATATTTAAGGGAAAAGAA ATCAGTAGGCAGTAGGCACTAGTTCTTGCTGTATGAACTATTGTTTTGAGAATGAACACATTTTCTTCCTACATTCTGAT CCGGTTGCAATGATGGTTAATACATATTTGTCTTACTCATGACTTGTGCATCATTCTTGCCTTTGCAGTCCTCCTGCTAT AGAGAGGTTGTCAAGCGGTTTGTTTCAAGAAGTTATCATTACAAATACAATTCCAGTGGCGGAACAGAACTATTTCCCCC AACTAACTGTCCTATCAGTGGCCAACCTTCTGGGAGAGACTATATGGCGTGTTCATGATGACTGCTCAGTGAGTAGCATA TTTCAGTAA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0073600.7) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGACTGGAGCTTGGAAAAATAAAGATAAAACGTTTTGCTGATGGTGAGATATACGTTCAGCTGCAAGAAAGTGTCAG AGGTTGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCCAATGAAAATCTTATGGAGCTGCTAATAATGATCGATG CCTGCAGGAGAGCTTCAGCCAAAAATATTACAGCAGTCATTCCCTATTTTGGATATGCTAGAGCTGATAGAAAGACTCAA GGGCGTGAATCCATTGCTGCCAAGCTTGTAGCAAATTTGATTACTGAAGCAGGTGCAAATCGTGTTCTTGCTTGTGACCT CCATTCTGGGCAGTCCATGGGCTACTTTGATATTCCAGTTGATCATGTGTATGGACAGCCTGTTATACTTGATTACCTTG CCAGCAAGACTATTTGTTCAGATGATTTGGTAGTTGTCTCACCAGATGTTGGTGGTGTTGCTAGAGCACGTGCTTTCGCC AAAAAATTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGTCATGGGCATAATGTTGCTGAGGTGATGAATTTGAT AGGTGATGTGAAGGGAAAGGTAGCAGTTATGGTAGATGACATGATTGATACTGCTGGAACTATTAGCAAAGGTGCAGCTC TATTGCATCAAGAAGGTGCTAGAGAAGTCTATGCATGCACTACTCATGCTGTTTTCAGTCCTCCTGCTATAGAGAGGTTG TCAAGCGGTTTGTTTCAAGAAGTTATCATTACAAATACAATTCCAGTGGCGGAACAGAACTATTTCCCCCAACTAACTGT CCTATCAGTGGCCAACCTTCTGGGAGAGACTATATGGCGTGTTCATGATGACTGCTCAGTGAGTAGCATATTTCAGTAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0073600.7) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQ GRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFA KKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTISKGAALLHQEGAREVYACTTHAVFSPPAIERL SSGLFQEVIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSVSSIFQ
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SMART
SM01400
1 98 98 3.4E-61 –
Gene3D
G3DSA:3.40.50.2020
1 279 279 2.1E-116
IPR029057
Hamap
MF_00583_B
1 292 292 43.584
IPR037515
PANTHER
PTHR10210
1 291 291 1.3E-204
IPR005946
PANTHER
PTHR10210:SF94
1 291 291 1.3E-204 –
TIGRFAM
TIGR01251
2 292 291 2.5E-117
IPR005946
Pfam
PF13793
2 98 97 3.6E-43
IPR029099
SUPERFAMILY
SSF53271
47 283 237 8.44E-62
IPR029057
ProSitePatterns
PS00114
106 121 16 -
IPR000842
Gene3D
G3DSA:3.40.50.2020
125 268 144 2.1E-116
IPR029057
CDD
cd06223
141 253 113 9.7957E-24
IPR000836
Pfam
PF14572
183 291 109 2.2E-23
IPR005946

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0004749
Molecular function Ribose phosphate diphosphokinase activity Catalysis of the reaction: D-ribose 5-phosphate + ATP = 5-phospho-alpha-D-ribose 1-diphosphate + AMP + 2 H(+).
Subterm of
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of
GO:0009156
Biological process Ribonucleoside monophosphate biosynthetic process The chemical reactions and pathways resulting in the formation of a ribonucleoside monophosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with phosphate on the sugar.
Subterm of
GO:0009165
Biological process Nucleotide biosynthetic process The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates).
Subterm of
GO:0044249
Biological process Cellular biosynthetic process The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0073600.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…