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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0079000 |
| Transcript ID | LotjaGi3g1v0079000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cyclic nucleotide-gated channel; TAIR: AT5G54250.1 cyclic nucleotide-gated cation channel 4; Swiss-Prot: sp|Q94AS9|CNGC4_ARATH Cyclic nucleotide-gated ion channel 4; TrEMBL-Plants: tr|A0A151SVK3|A0A151SVK3_CAJCA Cyclic nucleotide-gated ion channel 4; Found in the gene: LotjaGi3g1v0079000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:8696749..8706254) extracted from Lotus japonicus Gifu genome v1.2.
ACTTGGCATACCTGATGTGAAGAAGGCAACATCATATAGTCCAAAAAACCACTACTTGTCCATTTCCCTTTATCACACCA CTCTTGCACCTCACCTCACCTTCCTACTCCAATTATTTATTTATCCCCCCTTCACCCCATCCAGTCAATACTTCAAAAAT CAAAATCAAATTAATCTGTTGTTCACTACTTTAGTTTCATTTCTCTCTTCCATGGCCACCTCCCCCACCACCCACACTCT CTCTCACCACTCACGTGTTTCACACATGCACCACCACTACTATACCACCTCCTCCTCCGACGAGTTAGACCTCAAGGACA GCGACATTGAGGAAGATGACACCGAGGAGGAGGAGGAGGAGGTGGTGGAGAAAGGAGGAGGAGCCACCAGCGGCAAGGTG GTTGTTTCATCATCACGGTGGCGTGACCCTAGAGGCAAATGGGTGAAAGAATGGAACAGGATGTTCCTACTAGTGTGCGC CACCGGATTATTCGTGGACCCGCTGTTCTTCTACGCGCTGTCGATGAGCGACACGTGTATGTGTCTCTTCATCGACGGCT GGCTCCTCATCAGCGTCACCGTGATCCGCTGCATGACGGACGCGTTGCACCTCTGGAACATGTGGTTGCACTTCAACATG GCCAGACCAACCACCGGAACTTCCTCCTTGTCTTTTCCAGCTGCTGTCACCACCACCACCTTACGTGGCGGCTCCTTTGC GATTCATTATCTTAAGGCTAACACCGGTTTCTTCTTTGACCTCTTTGTCATCCTTCCAATTCCCCAGGTAACTTTAACTT TCGTCGTATCTCTGTATTTATTATTTTCTTTTTCATTTAAAACTTCATTTATGCTTTGGTGTTCTTTAATTGCCACATTA GTTACATAAGAAGTTTTGACACATTTAGACTTCAGTTTCTCTTCAATCTCCTTGTATATTTAATGAAATGTTTAATGAAA TCAATATCTGACCCTCATTACTTACACTTACATTAATTAACACTGTAAAGCATTAAATATATATATATATATATATATAT ATATATCAAAGAATTGATATTTAAAATAAAGTAGGTTGAGAATTGTATTAATTACCTAAAAAAAATTATATTTGATTATT GGATACTTTGAAAAGAAGTGTATAAAGTATAAACAATGAGCATATTACAAAAAGATTAATGTTTAGCTGACAATGGAAAA GCAACCCACTCAGAGAGATACATGAACATATATATATATAAGAGACTGAAATGAGAGATATAATCAATGATATTAACAAG ATATAAGAGAAGATAATAAGAAAAAATAGTGAAAATGAGATAGAAAAGCATGATGAAGTGTAACAATAAAAAGGATGAGA GATCATTGGTTGGTGCATGTAGAGAAGGATTTCTTGGAAGAGGTATATATTCGTTTAATGTGATCTTAAAGTCTTGAGAG AATTAGTTTTACCTTGGTGCAATAAGAAAGAGGTTTGAGTATTGATTTTTCCACACTATTATTTTACACTCCCATACCTC AGTCCTTTTTTCTTTTTCTTTTTAATAGTAGATAATTATCGATCCTACGATATATGATGAAAGGGATGAGGGAGATACAT ATTGTGTGTGAAAAAGTACATGTGTCCTTTTTACTATAAATATATAATTTTAAGTACTACCTTTTTTTTTGGGAGAAAGT ATGTTAATTTGAGAGGGGGGGAGGTTCGAAGTTTGGTACACTTGCAAGTGATGGAGGAAATCAGGAAGAAACGCATGAAA CGCGGCTTGTTTTTATTCGTGCAGATTGTGATGGGTAACGGCATTACACTTCATCATGTGGATGTTTTCTGGTATGCCCG TTATACGTTTTGGATTTGACAGGGGCCAGTGGGTTGGGGTTGTGTATATATTATGAAACACAGTCATTGTCTTGTTGATC AGGAAGTTCAGGACTAATGGTTTGTTTAGTATAAAAGAGAAAATGAGAATAGAAAAAACAAGACCAGATAAAATGTGAGA GAAGTTGATGAGGAGAAAATTAAAAAAGTATATTTAATTAGCTAGTTATTTGGTATGATAAAAATTAAGGATAAAGAGAG GAGAAAAATGACGGAAATTCTCTCATCTCATTTTTCTAATATTAAAATTTAATTAGAAATACACTTAATGATGATATTAA TTCATTTATAAATAAAATATATAGCTATAAAGACTAGGTGAACGTACTTTCAAAAAAAAAAAGACTAGGTGAACGTTAAC TTGGAAATTTCTTTTACGAATAGGACAAATGAAAGAAGAGGATATAATTGAGATAATAGAAAAAAAAATTAATAGTTATG CAATGTCGGTGTAAAATAGTTTTACACTGACAATCAATCACAACATGTCATATAAAAGGAATAATAACTTTCATTTTAAA TTATAATTAAAACAAAGATATGTTTTATGATAATTTTTTTTTGTTACAATGTAAAATCAATTTACACTGATGATGCATGT TCATTTAATATCATAGAAAACTAAAGAAAGGAGAGATCATCTATTCCTTAATTTGAGGGAACGTGTCCGATTTTTTTGGA TGTATATGTGAAAATGAGTTGAAAGAAAATAAGTTGAAAGAATATCAAAAGATAATGAAATGAATTTTGAATTGTTTGGA TTAAGTGAAAAAAAAAGAAATGTATACATATTTAGTGTTTCATCCTTTTTATATGAACTTTTAAAAATATTCACTTTTTT TAAAAGACAATTTTTAAATTTAAATTATATATATTATATTAAAATTATAATATTTAAAACAAAAATGTAATAAGATTGAT AACTATTAAAAAAGGAAACTATGAGGGTAAATCTGTAATTTAAAAGAAGATGCTCACTCTACTTAAATACTGTTTTCCAC TCATTTCTATTGCAACCAAATACATGAAAATTCTCAATTCCTTCCATTTTTCTTTCCTTCCTTATTCCTTCCATTATTTC CACACAAACAAACATAGCATAAAATCTGTTCTTAAACTTCCACTCTCCAATTCTAACTCTCTTTTCTTGGTTTAACTTTC CTCTAACACGTTTTTTTTTTCTCGAAAATAACTTCAATACACTAGAAGAAACAGACTCTAACCAGGTGGAATTTTGTAGA AAAGAAAAAAAGAGTAAAATTTAAAATTTTATCAATTTTGCAGATTGTGCTATGGATAGGGATTCCATCTCTGTTGGAGA AAGGCTCAATTGCGATGGTGACGACGGTGTTCTTAACAATGTTCCTCTTTCAATACCTTCCCAAGATTTATCACTCAGTT TGCATCTTGCGCCGCATGCAAAACCTCTCCGGCTACATTTTTGGCACTGTTTGGTGGGGTATCTCGCTCAACCTGATCGC ATATTTTGTCGCTTCCCATGTAAGTAACACCTTTATGTGTCTACATTTGCTTAGCAATCCAGATCCTCTTAATTATAAAA TAAAACTTGATCATGATAAGTTTTATACCATTAATTTATTTAATTATTAAACACTCAAAAAATAATAATTAGATGGTGAA ATATTTCATTTAAACTACTTTTTCTTCCCAAAACAAATGTTAAAATAGATTTTTAAAACTATTCTTAAAAACGGAAAACT AAAATAGCTGGAGATTAAAGCAATAGTTTATAAAGAGTAATGTTACTCACACACCTCTCTTTTGAGGTGTGTGAGGTGGA ATGATGAGAGAGATAGGAAGAAAAGAAAAAGTAAGGGAGAGAAAGTATGAGATGTGATAGATGGTAAAAGGAGAAAGATA AAAACAAAAAGAGGTGGAAATGAAGTGTTTTAAAAATGAGGTGTGTATATATCATTACTCGTTTATAAATTATAAGTGTA AGTGTTGGAAGTCGGATTGCGTTAGTCCATTTTAGACTAAACCACACCCACATCCACAGCCCATCATTCTCCTGGTCCTC AGTCCCCATATTGGGCCAGCGTGCTTCGGGCAAACAGAATTTGTACTTAGTTTAAGTATTCATTATTATTGTGTGTTTGT GCATTTCTGAACAGGCAGCGGGTGCATGTTGGTACTTGCTAGGAATCCAAAGGGCAACCAAGTGCCTGCAAGAGCAATGT GGGAATGCCCCTGGTTGTAGCCTTAAAACCCTGTGTTGCCAAAAGCCTATATACTATGGAACCACCAACTTGGTGATGAG GGACAAAACAAGGTTGGCTTGGGCACAGAATAGGGAAGCAAGGTCCACATGCTTGGATAGCCCTGATAACTACGACTATG GTGTTTATGAATGGACTGTTCAGCTCGTAACCAATGATAGTCGATTGGAAAAGATACTCCTACCTATCTTCTGGGGCCTC ATGACTCTTAGGTAGGTAGCTATACCTCCATTTTTCTCATATACCATGGTTCCCCCTCATCATGCATGATTATTGATTAA TTTCTCTCATGATGTGCTTTGTCTTACATTCTTCTTTTGACGAAGATTTTGTTTGATTGCATGTGTATGCCTTTTACCTC GCTCTTTCTAGTGTCACTTTATGTGTTGTGACACAACTCCAAAAGCAGCCACTATCCTTTTTTTATGTGTTCAAAATGCT CCTAAAACGTAACCAAAAAAAATATGCTCCTAAAACATGTTAAATTCGGTAATTGTAATATTTCAACTTTTATGGGGAAA AAAATCATGTGTTTGGACCTTTGGAGAGCTAGTCGCATAAGAATAAAGATGTGGATGTTTATGGATCGCACATGGTTGCC TATATTGGAGATACTAGTGTTAGTTAAAAAAAATTGGAAAAAAATTAGTTGACGCTTCAAATGTAGTTACAAGGAGATAA GAATTGAATAACGAATAGAAAAGGAAGAAATATGATTCGTGGGTACAGTAAAAAAGAAGAAGATAGATATAGAAAGAAAA AGTGACATAAATGTGAATAGCTTCATAGTCACTCTACCTTTATTCTCTTACCTATTTGTTGACGTGAACAGCACATTTGG GAACCTAGAGAGCACAGCGGAACGGATAGAAGTGATTTTCAACATTATTGTGGTCACTGCTGGCCTCATTCTGGTCACCA TGTTAATAGGAAATATCAAGGTACCCTCACACTTATTTAATTAATTAATTTGAGTCGCATGATATATAAAATTAATTCAA GTGTTTATATCAAAGTAATGGAAGAAATCAAAGAAAAGATTTCACATTCTATTACTCATATGAGAGTGAGTATCATTATT CAGCTTATATACAAAATGCTAAGATGTAACTAACTAATAGAGAAAAGGGAAATGTGGTTAATCAGTTTTAAGTTTTTACT AACTGTTAATAACCGCTTATTTAACCCCTAACTATATCTCTAACTGACTCTAGTTACTAGTAAGCTAATATATATACCCC CTCATAAGATGGTGAAATGGTACTTTGGGAAGAGTTTTTTAGTAAGCATGCATATCTGCTAGTTGATCATGAGTAGAGAC ATGTATGAGATTGAGGAACTAATTAGAATTCACATGTTTTCTGACAAAATAACAATCAATATCCACATTGCAAGTAGGAT TTGTGGCTAATTGAATGGCTGTTTTATCGTCACAAAGGACCATGACTGATTGAAGAGAAATCTCAAATGACCTGAGAAGC TGCTTAAACCACAATTGTTAACTAGTGAGGAAAGCTAGTGCCCTTTACTCTGCTTCGGCAGAAGAACTTGCAACGACAGG TCGCTTCTTTGACTTCCAAGCTATGATAGAATTGCCAAGAAATATGCAAAAACCGGTTGAAGACTTTCGGGTGAGGGAGA AACTACCCCAATCTGCATCAACATAAACAGTTACTTTGAGTGAAGACTTTGTTGGAAACAAAATGCCTTGACCTGGTGGC CCTTTCAGATATTGTAAAATTTGGTGAACTGCCTGCAGATGAATTGTCCTAGACTGAGACATGAACTGAGAAAGTTTATT CACAACATATGTAATATCTGGTCTTGAACTGAGAAAGTCTTTATATTGGGATGGACCTGTTAAGAGTTCACCTGAAGTGG CATTGAGAGATATATTAGGATCCATAGGAAACTATTGGGGCTTGCAATCCCTATATCCATATCGTTCAAAAGTTGCAGGG TGTACTTTCTTTGACATAAATACAAACATGTAGGTGAAGAAGCTATTTCCAAACCCAAATTTTTTTTTAGATCATCTCTG GTTTTTGACCTGAAAGATTACAGAAAGCACCTGGTAAATAGTAAATTATCAGTATATGGTTGAATGAAACCATGCTTAAT AAGAAGCTCTAAAAATTTGACAAACCACTATTGCAGAAAGCACTTGGTTGGATTTAGTCCTCCTATTATTGTGTCATCTA CATAAACCATTAGCAGAACCAAGGAATCTTGACTCCCTTTTGTAAATAGTGAATAATCAGCTTATGATTGAATTAAACCA TGCTACATAAAACCTCTAAAAATTTGACAAACCACTGTTGAGAAGCTTGTTTCAGTCCCTATAAGAACTTATTTAACTTG CACACATGACCAGTATTGGATGTTGGATACCCTAGAGGGAGCTTCATGTAGACTTCCTCTGATAATTCTTCATTAAACGG CATTATTTGTGTCCAATTGGACTAAATGCCAATGCCTCTGAGCTGCAACAGAAAGCAAGACTCTAATAGAAGTGATTTTG GCCACTTGTGATAAGGTTTCCATGAAATCTATCTGTGCTTGCTCTGTGTAACCTTTGGCTACAACCAAAGCCTTGTATCT ATCAATTGATCTATCTGCTTTATGTTTAATTTTGTAAATCCAACGATACCCAATTGCTTCCTTTCCCTCTGGTAATGGCA CAATAGACCAAGTATGATTGAGTTCAAGAGCTGCAATTTCTTCTACCATGGCAGTTCTCCATTGAGGAAACTTGACTGCT TGGTAATTGTATTGAGGCTCATAAGAGCTGTCCACATGCAAGATAAAATCCCTATAGGTGGGAGATAAGCGATCAAATGT AAGACATGCAGTGAGAGGGTATGGAGTATGACACACGTAGTTTTTGTAGATGAGAATGTGGTCTAGAAACTCTGGTGGAC CTCTTGGTCGGTTCAGCAGGGGCTTGTTCAAGAATAGGAGAATTATCAGGTGTAGGGACCAAAACTTGTGTAGGAGCAGC AGGCACAGAAACTGTAGTTTCAAGTGGGAAGTCAGATATGGTCATTGACTCATTGGCATCAGTATCTTATCAAACTGTGC TGAAGAAGAATCTGTAACTGATGCAGTATTCTTCTTGTATTTTTTCTTAACTGTTGTGATGACTGGAAATTCTTGGACTG CTGTGTGGAATTGCCATTGTATTTACAGTACAAGCAAGCTGATTATCAGACAATTGAGTTGAAGAATCAATCTTTCTATG ATTTTCATCTTGAATGACAAGCGAGAAAACATCATCGATTGAGGGAATAGAGCGTATAAGTAAGATCTTCCCTCTAATTT GAGAAAAGCAATCATTCAATCCCATCAGAAATGTAAGAGCATATTCAGTCTGAAATGTGCAATCAGAGGTTGTACCCCTC CACAATCACATTGATGAACCGCGCGATATTCCCCAAGCAATGGAAGAAATCAAAGAAAAGATTCACATTCTATTATTCAT CTGAGAGAGTGAGTATCATTGCAATGAGATTCAGCTTATATATAAAAATCTAAGATGTAACTAACTAATCAGTTTTAACT AACTGTTAACCACTTATTTAACTACTAACTATATCTCTAACTGATAACTCTAGTTACTAGTAAGCTAATAGTTTATTAAA AATTTCAAACATACACTATATCTCTAACTGATAACTCTAGTTACTAGTAAGCTAATAGTTTATTAAAAATTTCAAACATA CACTTATTAGTTATTTTTTGGTATCTTATAGGTGTTTTTAAGTGCTACAACATCAAAGAAGCAAGCGATGCAGTTAAGGA TGAGGAACCTTGAATGGTGGATGAGAAAGAGGCAGTTGCCGCAGGGGCTCCGGCAGCGTGTGCGTAACTATGAGCGGCAG CGTTGGACTGCTATGCGTGGGGTTGATGAATGCCAGATGATCAGAAATCTCCCTCAGGGGCTCAGAAGGGACATCAAGTA CCATCTCTGTTTGGATTTGGTCAGACAGGTAAGGTTCCATTCCTCACTTCAACATCACTTTTTTTTTGTGCCATACTAAA ATTTCAAACAGTAGAGATTGTTTGCATTTCTTTAAGGACTGCAGTCTGCAGAGGATTCTAATCATGCTAATATTTTTTTT GTCATCATTCAAATTTTGTTTCAGGTGCCACTGTTTCAGCATATGGATGATTTGGTGCTAGAGAACATTTGTGACCGTGT GAAGTCTCTTGTGTTCACAAAGGGAGAAACGGTAAGATCTAAATCCCTCTGAATTGCAGTATTACTAACAACATATAGCA TATACATTTCATATAGGAGGCGTTATGCAAATTTTTGAGTTCAAACAACAAGCTGTTCATGTGGTCAATGAACTTCACTT ATTTAAAGTGATTTCTTACTTCAAAAGAGAAATGACCTTAGACATCTCAATAGTTGCTGGGAAAAAAAACAATTAAGAAT ATTTTACATACATACATACATAACAAATCAATTATCTCATTAATGAATGATAGTTTGTTTGGATAAGTGGTGACACACAA TTCAAATCACGGTAACTCTTGTAGCTTCTTTCCAGAGTAAATTATGGAGTTTTAGGCCGCAGAACCAGACATGCCAGCTA TGAGATGTCTTCATTTCCCTTTTAGAGTCAATTGTGAACTACTACTAATCAAATTGAATGAGCTAAATATTTGTGGTTAT TGTGCATATACAGATAACTAGAGAGGGAGACCCGGTTAAGAGAATGCTATTCGTGGTAAGGGGCCACCTTCAGAGCAGCC AAGACCTACGAGACGGGGTGAAAAGTTACTGCACCTTAGGCCCCGGGAACTTCAGTGGCGACGAGCTCCTCTCATGGTGT CTAAGAAGGCCGTTCATAGAGCGTCTTCCACCGTCCTCAGCCACTCTGGTGACGCTCGAAACCACCGAAGCATTCGGGCT TGAAGCGGAGGACGTGAGGTATGTGACACAGCATTTCAGGTACACCTTCATGAAGGAAAAGGTTAAGAGAAGCGCGAGGT ATTACTCGCCCGGGTGGAGAACTTGGGCTGCAGTGGCCATTCAACTAGCTTGGAGGAGGTACAAGCACAGGTTGAGTTTG ACATCTTTGTCATTTATAAGGCCCCGGAGGCCGGCGTCGAGGTGCACTTCCATGGAGGAGGACAGGCTTCGCCTTTATAC GGCTTTGTTAACCTCGCCAAAGCCTAATGACCAGGAGGAATATGATGACTTTGACTTTTCATAGTATGTAGATTTTGCTT GGTTAACCTGAATGAAAAAGAAAAGAAGGAAGTATATAATGTATGGAGTGTGCTGGAGTGCTTTGATTGTTGACTTGATA TGTGGATTATCTTAGGCTGACTAGTGAAAATGTAAAAAGTAATTAATGAATAAAATTATTTATGGA
CDS sequence (LotjaGi3g1v0079000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCACCTCCCCCACCACCCACACTCTCTCTCACCACTCACGTGTTTCACACATGCACCACCACTACTATACCACCTC CTCCTCCGACGAGTTAGACCTCAAGGACAGCGACATTGAGGAAGATGACACCGAGGAGGAGGAGGAGGAGGTGGTGGAGA AAGGAGGAGGAGCCACCAGCGGCAAGGTGGTTGTTTCATCATCACGGTGGCGTGACCCTAGAGGCAAATGGGTGAAAGAA TGGAACAGGATGTTCCTACTAGTGTGCGCCACCGGATTATTCGTGGACCCGCTGTTCTTCTACGCGCTGTCGATGAGCGA CACGTGTATGTGTCTCTTCATCGACGGCTGGCTCCTCATCAGCGTCACCGTGATCCGCTGCATGACGGACGCGTTGCACC TCTGGAACATGTGGTTGCACTTCAACATGGCCAGACCAACCACCGGAACTTCCTCCTTGTCTTTTCCAGCTGCTGTCACC ACCACCACCTTACGTGGCGGCTCCTTTGCGATTCATTATCTTAAGGCTAACACCGGTTTCTTCTTTGACCTCTTTGTCAT CCTTCCAATTCCCCAGATTGTGCTATGGATAGGGATTCCATCTCTGTTGGAGAAAGGCTCAATTGCGATGGTGACGACGG TGTTCTTAACAATGTTCCTCTTTCAATACCTTCCCAAGATTTATCACTCAGTTTGCATCTTGCGCCGCATGCAAAACCTC TCCGGCTACATTTTTGGCACTGTTTGGTGGGGTATCTCGCTCAACCTGATCGCATATTTTGTCGCTTCCCATGCAGCGGG TGCATGTTGGTACTTGCTAGGAATCCAAAGGGCAACCAAGTGCCTGCAAGAGCAATGTGGGAATGCCCCTGGTTGTAGCC TTAAAACCCTGTGTTGCCAAAAGCCTATATACTATGGAACCACCAACTTGGTGATGAGGGACAAAACAAGGTTGGCTTGG GCACAGAATAGGGAAGCAAGGTCCACATGCTTGGATAGCCCTGATAACTACGACTATGGTGTTTATGAATGGACTGTTCA GCTCGTAACCAATGATAGTCGATTGGAAAAGATACTCCTACCTATCTTCTGGGGCCTCATGACTCTTAGCACATTTGGGA ACCTAGAGAGCACAGCGGAACGGATAGAAGTGATTTTCAACATTATTGTGGTCACTGCTGGCCTCATTCTGGTCACCATG TTAATAGGAAATATCAAGGTGTTTTTAAGTGCTACAACATCAAAGAAGCAAGCGATGCAGTTAAGGATGAGGAACCTTGA ATGGTGGATGAGAAAGAGGCAGTTGCCGCAGGGGCTCCGGCAGCGTGTGCGTAACTATGAGCGGCAGCGTTGGACTGCTA TGCGTGGGGTTGATGAATGCCAGATGATCAGAAATCTCCCTCAGGGGCTCAGAAGGGACATCAAGTACCATCTCTGTTTG GATTTGGTCAGACAGGTGCCACTGTTTCAGCATATGGATGATTTGGTGCTAGAGAACATTTGTGACCGTGTGAAGTCTCT TGTGTTCACAAAGGGAGAAACGATAACTAGAGAGGGAGACCCGGTTAAGAGAATGCTATTCGTGGTAAGGGGCCACCTTC AGAGCAGCCAAGACCTACGAGACGGGGTGAAAAGTTACTGCACCTTAGGCCCCGGGAACTTCAGTGGCGACGAGCTCCTC TCATGGTGTCTAAGAAGGCCGTTCATAGAGCGTCTTCCACCGTCCTCAGCCACTCTGGTGACGCTCGAAACCACCGAAGC ATTCGGGCTTGAAGCGGAGGACGTGAGGTATGTGACACAGCATTTCAGGTACACCTTCATGAAGGAAAAGGTTAAGAGAA GCGCGAGGTATTACTCGCCCGGGTGGAGAACTTGGGCTGCAGTGGCCATTCAACTAGCTTGGAGGAGGTACAAGCACAGG TTGAGTTTGACATCTTTGTCATTTATAAGGCCCCGGAGGCCGGCGTCGAGGTGCACTTCCATGGAGGAGGACAGGCTTCG CCTTTATACGGCTTTGTTAACCTCGCCAAAGCCTAATGACCAGGAGGAATATGATGACTTTGACTTTTCATAG
Protein sequence (LotjaGi3g1v0079000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATSPTTHTLSHHSRVSHMHHHYYTTSSSDELDLKDSDIEEDDTEEEEEEVVEKGGGATSGKVVVSSSRWRDPRGKWVKE WNRMFLLVCATGLFVDPLFFYALSMSDTCMCLFIDGWLLISVTVIRCMTDALHLWNMWLHFNMARPTTGTSSLSFPAAVT TTTLRGGSFAIHYLKANTGFFFDLFVILPIPQIVLWIGIPSLLEKGSIAMVTTVFLTMFLFQYLPKIYHSVCILRRMQNL SGYIFGTVWWGISLNLIAYFVASHAAGACWYLLGIQRATKCLQEQCGNAPGCSLKTLCCQKPIYYGTTNLVMRDKTRLAW AQNREARSTCLDSPDNYDYGVYEWTVQLVTNDSRLEKILLPIFWGLMTLSTFGNLESTAERIEVIFNIIVVTAGLILVTM LIGNIKVFLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNLPQGLRRDIKYHLCL DLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRMLFVVRGHLQSSQDLRDGVKSYCTLGPGNFSGDELL SWCLRRPFIERLPPSSATLVTLETTEAFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHR LSLTSLSFIRPRRPASRCTSMEEDRLRLYTALLTSPKPNDQEEYDDFDFS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 83 | 83 | - | – | |
| PANTHER | 14 | 685 | 672 | 0.0 | – | |
| PANTHER | 14 | 685 | 672 | 0.0 | – | |
| MobiDBLite | 25 | 60 | 36 | - | – | |
| MobiDBLite | 34 | 52 | 19 | - | – | |
| SUPERFAMILY | 72 | 410 | 339 | 1.02E-19 | – | |
| Phobius | 84 | 104 | 21 | - | – | |
| TMHMM | 84 | 103 | 20 | - | – | |
| Phobius | 105 | 115 | 11 | - | – | |
| TMHMM | 113 | 135 | 23 | - | – | |
| Phobius | 116 | 135 | 20 | - | – | |
| Phobius | 136 | 179 | 44 | - | – | |
| Phobius | 180 | 202 | 23 | - | – | |
| TMHMM | 180 | 202 | 23 | - | – | |
| Phobius | 203 | 207 | 5 | - | – | |
| TMHMM | 206 | 228 | 23 | - | – | |
| Phobius | 208 | 228 | 21 | - | – | |
| Phobius | 229 | 239 | 11 | - | – | |
| TMHMM | 240 | 262 | 23 | - | – | |
| Phobius | 240 | 262 | 23 | - | – | |
| Phobius | 263 | 357 | 95 | - | – | |
| Phobius | 358 | 375 | 18 | - | – | |
| TMHMM | 358 | 377 | 20 | - | – | |
| Phobius | 376 | 383 | 8 | - | – | |
| Phobius | 384 | 409 | 26 | - | – | |
| TMHMM | 384 | 403 | 20 | - | – | |
| Phobius | 410 | 690 | 281 | - | – | |
| Gene3D | 411 | 479 | 69 | 4.9E-15 | – | |
| SUPERFAMILY | 414 | 604 | 191 | 1.96E-37 | ||
| Gene3D | 486 | 604 | 119 | 3.4E-29 | ||
| CDD | 488 | 596 | 109 | 3.17736E-17 | ||
| SMART | 488 | 617 | 130 | 5.0E-6 | ||
| ProSiteProfiles | 488 | 598 | 111 | 13.474 | ||
| Pfam | 508 | 598 | 91 | 1.7E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0079000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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