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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0084100 |
| Transcript ID | LotjaGi3g1v0084100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GPI transamidase component PIG-T; TAIR: AT3G07140.1 GPI transamidase component Gpi16 subunit family protein; Swiss-Prot: sp|Q969N2|PIGT_HUMAN GPI transamidase component PIG-T; TrEMBL-Plants: tr|V7AKJ8|V7AKJ8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0084100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:9472346..9477659) extracted from Lotus japonicus Gifu genome v1.2.
TAAAGGCCTGCCCAAAATGGACTTATAAATCCCATTATCCCAAGAAGCCCAAAACCTTACCTCCCAAACAGAGAAACTTC TTAGACCATTGCAGTGACCTTCAGCTCGCACAGTGCCATTCATGGCAGCGCAACCTCTGCGGCGGCGGTGAGCATAGCAG GCACGGCGGTGGTTCGTATTTCCAAACGCATCAAGCGAAATCAACGATGGCTCTCTTAATCAAACCTTGCCTCCTTCTCT GCCTTCTTCTTCTTCTTCTTCTCTTGCTTCCGATTCCGTCGCCGGCGGCGGGCGCAGAAGAAGAAGAGTTTTCCGAGGAA TTGCTACTGAAGCCGTTACCCGATCGCAAAGTACTCGCGCATTTCCATTTCCAAAGCGAAGCTCCTCTCGCTGAACACTC CTTCGCCCGTCACCACCATCTCTTCCCCAAATCGATTGCGCAACTGGTGTGTGTACTTTTCTTCCTTTGCTTTTCTTTAC TGATCATCGATTTCGATAGCGAAATGCAATCGATTCGAGTAGTGTTCATATGAACTTGGTGTTTTGCTTTTCCTATTTTA TTGAAATGCATCTAATGTGAGTGATTCAAGTTATTTAAATTTCATAGATTATGTCTATATTGGTGGTTAGTTTACTTTAG GTTAGTTTTAACTTTTTCAGTTTTTGTTTTAATTCATTGCTTGATGTGTATATTGCAAATCTTATTCATTGTTTGTTGCT AATTGTTAATTTGGCAAATTGTTAAAAATTTGTCAATTAAATACAAGATCAGAGATGAGAATGAAGATACTAGTTCCACT TAGAGTCTGTTTGGATGTGGACCAAAGCGTACTTATTGGAGCTTATTCAGTGTTTTTGTTAGTTAATAAGGTTCATTAAG TGATCTTTAGTCCGTATCCGAACAGGGTCTTACTCAAGACCTGGACTTACCCTCCCAATTTCCATTCTAAAACTAGAGTC TCATTATTCTTTTTATACCCTCAAGACGGGATCCCCGTCTCTTACTGATTATGTAACTAGCCAACTAACTTTTTCAACTA ACTACAACTGCCGAATCTTAACAGTTAACTTCTATTTTTTCTACTAGCTGATTCAGACCCTATTGAGGTATTGAATTCTG TACATGAATGATCCCTTGCCAGAGAGAAATAAATGTTTAGCATTCTTGAACCTGTTTTCCCTGTTTAGTTGTGACTGGCA CCATGTCATGTCAGCTTTTCTATGATCTTCAGTCTGCTTATTAGATTATATTAACTACAATTCATTTTGAAGATATGATT ACAAATGAAATATGGAACTCTGACTGAAATCACCATCCAAGTACAGTATTCTCAGGTTTTGAGATGAGTATTGTTTAAAC CTTCGATTAATTGATTTGTTCTAGTAGTAGCCTTGTACATAACACATTATTAATGGAGATATAAACATGTGAATATGACT ATTAATCATGTACAGAATGTTATAGTAATACAATAATTCTTATCTACGCCATTGAGTTTTTAGTGGTGTATATTTTCTGT TACCATTTCATCCTAAATTAGAAAATTGCGTTGAGAGGGAAGTCCTTCACTTGACATAAAATATTAATGAGCCTTCTGGA ATTGTAACGATTTTTTGTTTGATTTTGTTATGCTGATTGCTCATAAATTTTTCCTGAATATACTAAATAACATGTGAATT AGTGCTGGATGGACAGGTTAAGAAATTTCATATTAAAGCAATGGAGTTATCTTTCACACAAGGTCGGTGGAACTATGAAA GATGGGGTGGATTTGACCCAATATCAAGCCGCAATGCTAAGCCTCCTGGAGTTGAATTGTGGGCTGTCTTTGATGTCCCT CTAGACCAGGTTGATGCTTCTTGGAAAAATTTAACCCATTCTCTGTCAGGTCTCTTCTGTGCTTCAATCAACTTCCTAGA GTCTTCTACCTCTTATTCTGCTCCTAAATGGGCATTTCAATCAGCTTTAGGCAGTTTAAGATATGGTACACTGCCACGAG AAGCTGTCTGCACTGAGAATCTTACTCCGTGGTTGAAACTCCTTCCTTGTAGAGATAAAGCTGGCCTCTCTGCCTTAATG GATAGACCATCCATTTACAGAAGCTTCTACCACTCTCAGCGATTGCACTTGTCAATATCCGGAGCTTCTGCAGATGGGTT AGATTCACAAGTTATCCTAGAACAAACTCTTACAGTTGTACTTCAGCCAAATATTCAGAGAGCTGGTATGAACTATCTCA GTGAAACAAAGATACAACCTAGCTGGTCTCTGAGTTCAATATTTGGGAGAAAAATCAATGGAAGATGTGTTCTTGCCAAG TTGAGTAATGTCTATCTTCAACTTGAGAGAGGTCTAGTTGCTCAAATTGAGAATCTCCAGAAGAATACTGCTGTATATGC TGCTAATGACTCAGGTCCAGACGATTTTAGAAGGAATATTGGCTTTGAATTATCTGTTATGCCTGACAGGGTGCATAGAG AAGTGGAAAAGAGCTCCTCAATTCTATATGAATATCCAATCAAAGAGTATAAAGACACTGAACAATTTGATTTAGGATTA ACATGGAAGCATCCAGTTGTTTGGTCCAGCCCACATGCACCTTTATACGCCAGTAGATTTTTAATGGGGAGTGGAAATGA AAGAGGTACGATTTCAATATCCATGAAATCAACAGAATTGAGTCAGGGCTTCATTGCGACCAATAATACTGGTGAGAGGT GTAAGTTGCAAGTTAATGTTCTCCAAATTGTGCCTTGGTATATTAAGGTATATTATCATACGTTACAGTTATTAGTTGAT GAAAGGATTCAAGTAGTCTCAGATTTTGTTGAGAGAATGCGTGTTTCACCCTCTGAAGACAAAGTATCGACAGGGGTGAT GGAGCTGGTTCTCAGATTTCCTTGTGAAGTAAAGTCAGCTTTATTAAATATAGAGTTTGATAAGGTTTGCTCTAATTTCT ATTTCCATTTATATTTCTTCTATATATTTAACTCACTTTTTGTTTGATTGACATCAAACTCTATAAGTCAATGTTATTAA GGAACCTCGTAAATCTTAATCAGAAGATCATTCTAAATAAAGAAGACTGCTGATGATATTATATGGAAGTAGGAGAAATC ATAGGAAATACGAGTTTGATAGTTGGTATACTTTATGACCTTCAAAACTCTAAATCACAGAGAACAGACTATAACTAAAT GACATTAGATCCTGGTTGAAGCTATCTATGTGATATATTCACCACAGACCCTTTTAGGATAGAGGATCAGTTTCTTCTTC AGATCAAGTTTGTTTTTGACATGCTTTTGTTGGTCTGCCTAGGGATTCTTGCACATTGATGAATACCCTCCAGATGCTAA TCAAGGATTTGACATTCCCTCAGCAATAATAAGCTTTCCTGACTTCCATGCTGGTTTGCAATTTTCTGATGACTCTATAA GCAAGACACCAATGTTGTCTAAATTACAGGTTATTTAAATCTGCACTCCATCTTTGCTCATAACTATGCTGCATACAAGA TTCCTCTGTCATCCCTAACTGTCTGGTTCTTTACTGCAGGAAAAGAGCCCTGTTCTCTCTTACACAGAAGTTTTGCTTGT ACCATTGACAACTCCTGATTTCAGTATGCCTTATAATGTCATTACAATCACATGCACAATTTTTGCATTGTATTTTGGAT CTTTGCTAAATGTACTCCGGAGACGAGTTGGAGAGGAGGAAAGACTTTTGAAAAACAAAGGTAATTCTCGACACTTCTAT TGTCTGCATCCTGGTACATTTATTTTTTGATAAGCCTAGTTGTATTGAAAAGAAGTACAAGGGGTACTTCAACCCAATAC AAAAGTAACAATAGTTGTTTATACAAAAATAAAGGGAAGTTTAAGGAGACGCAGCTGCATCCTGGTACATAAGTAACTTA ATTTTGTACAACGTTGAGTAGCCCTAAGGTGGTAGTGTTTGGGAGACATCAGAATAGGTTGGATAAAAACTCAATGTGGT GCTTTTATGAGTTGTGGTTAATAAAGCTTCCTCACTTAACACCCCCTAAGCATCCACCCTTCTAAGACTCACTCTGTTCT CTCTTTGGGTTAGTTTACCAGACTGTTACCTGATACCTTGATACTTATGATAGTGTGCAGTTATTACAAACTAGTCATGC AAACATAGTAGTATGGTGATATGTACTTCTGAAATTATAGATTTAAGTTCAGGTAGAAGAATTTAATCTAAACCCTATGG TCTATAGCCCTAGATTTATGTATTTCTTCCCTGCCCTCCCTCTCATATTTTCATGTTTTCTTGCTCAGTTTCTAATATGT GCATTTTTCTACTTGTAGATGCAACCAAAGGTGCGTTCCTTCGTCGAGTATTAACTAAATTATCTTCCAAGCTTAGAGGG AGATCACCGGAATCTACTCAACCACGATCATCATTATCCTTCATTACTCCAAAATTGATTCTTAGAGTACTAGTGGTTGC AGGAATTGCAGTTGCATGGCACTACTACTCGCAATGATAGCATCCAACTTTGGTAGTTTTAGGTGTACCATATTCAGATT GCATGTAATTTTTGTACAATACAAGCCTTTCTTCCACATCTTGACGCTCTTGCCTTCATGTTTGCTTTTTAATTGATCAG AACAACACATGATTACATGTAACGCATGTAAATTAAAAAATTGGTTATAAACAAATTTTTGTCCATCTGATTTTTTATTG GTAATAGAAATTGTTCTAAATTTTGTTTAATGCCATGTATTACTAATGTTGATATTTAAATAATTTAGAAATTTGATTGC TTCTAATTAAAGGAGTTTCTTTATAGTGGTTGCACTGCTTACTTCTTTCCAATTTTTCAACGAAGAAACTGGATATTCTT AGCCGACAAGAGCACAATGGTTTAACCTGTACATCCTCTGCGACACTAAATATTATCTCTTTGATATTTTCAGGGTATCA CAAATCAACACATTCACAGCAATTACTCAACCATGAAAAAAAAGCACAAACTACATTTTTCTTCTCTACGAGTTTTTATT ATCTAATCCTTTTGTAATTAGCTGCTACAATTGCCTCATCTTCTCTTATCCGCTTCAAATTCTTGCTCATGTAATTGCAT GTAATCTGGCTGGGTGAAATGCTGCGAGGGAGGTCATCGACTTTATCTCGAATACCTGTGAAGAGTGCATCAAATGTGTG TCAATGTTGAGGCTGATAGACAAGTAATGGAGGAGGAAGGTTTGGTTGAAAGTTTACCACAACCACAAATAATGGAGAGT AATGCTGGATATAACAAAATATACAGATTACAGA
CDS sequence (LotjaGi3g1v0084100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCTCTTAATCAAACCTTGCCTCCTTCTCTGCCTTCTTCTTCTTCTTCTTCTCTTGCTTCCGATTCCGTCGCCGGC GGCGGGCGCAGAAGAAGAAGAGTTTTCCGAGGAATTGCTACTGAAGCCGTTACCCGATCGCAAAGTACTCGCGCATTTCC ATTTCCAAAGCGAAGCTCCTCTCGCTGAACACTCCTTCGCCCGTCACCACCATCTCTTCCCCAAATCGATTGCGCAACTG GTTAAGAAATTTCATATTAAAGCAATGGAGTTATCTTTCACACAAGGTCGGTGGAACTATGAAAGATGGGGTGGATTTGA CCCAATATCAAGCCGCAATGCTAAGCCTCCTGGAGTTGAATTGTGGGCTGTCTTTGATGTCCCTCTAGACCAGGTTGATG CTTCTTGGAAAAATTTAACCCATTCTCTGTCAGGTCTCTTCTGTGCTTCAATCAACTTCCTAGAGTCTTCTACCTCTTAT TCTGCTCCTAAATGGGCATTTCAATCAGCTTTAGGCAGTTTAAGATATGGTACACTGCCACGAGAAGCTGTCTGCACTGA GAATCTTACTCCGTGGTTGAAACTCCTTCCTTGTAGAGATAAAGCTGGCCTCTCTGCCTTAATGGATAGACCATCCATTT ACAGAAGCTTCTACCACTCTCAGCGATTGCACTTGTCAATATCCGGAGCTTCTGCAGATGGGTTAGATTCACAAGTTATC CTAGAACAAACTCTTACAGTTGTACTTCAGCCAAATATTCAGAGAGCTGGTATGAACTATCTCAGTGAAACAAAGATACA ACCTAGCTGGTCTCTGAGTTCAATATTTGGGAGAAAAATCAATGGAAGATGTGTTCTTGCCAAGTTGAGTAATGTCTATC TTCAACTTGAGAGAGGTCTAGTTGCTCAAATTGAGAATCTCCAGAAGAATACTGCTGTATATGCTGCTAATGACTCAGGT CCAGACGATTTTAGAAGGAATATTGGCTTTGAATTATCTGTTATGCCTGACAGGGTGCATAGAGAAGTGGAAAAGAGCTC CTCAATTCTATATGAATATCCAATCAAAGAGTATAAAGACACTGAACAATTTGATTTAGGATTAACATGGAAGCATCCAG TTGTTTGGTCCAGCCCACATGCACCTTTATACGCCAGTAGATTTTTAATGGGGAGTGGAAATGAAAGAGGTACGATTTCA ATATCCATGAAATCAACAGAATTGAGTCAGGGCTTCATTGCGACCAATAATACTGGTGAGAGGTGTAAGTTGCAAGTTAA TGTTCTCCAAATTGTGCCTTGGTATATTAAGGTATATTATCATACGTTACAGTTATTAGTTGATGAAAGGATTCAAGTAG TCTCAGATTTTGTTGAGAGAATGCGTGTTTCACCCTCTGAAGACAAAGTATCGACAGGGGTGATGGAGCTGGTTCTCAGA TTTCCTTGTGAAGTAAAGTCAGCTTTATTAAATATAGAGTTTGATAAGGGATTCTTGCACATTGATGAATACCCTCCAGA TGCTAATCAAGGATTTGACATTCCCTCAGCAATAATAAGCTTTCCTGACTTCCATGCTGGTTTGCAATTTTCTGATGACT CTATAAGCAAGACACCAATGTTGTCTAAATTACAGGAAAAGAGCCCTGTTCTCTCTTACACAGAAGTTTTGCTTGTACCA TTGACAACTCCTGATTTCAGTATGCCTTATAATGTCATTACAATCACATGCACAATTTTTGCATTGTATTTTGGATCTTT GCTAAATGTACTCCGGAGACGAGTTGGAGAGGAGGAAAGACTTTTGAAAAACAAAGATGCAACCAAAGGTGCGTTCCTTC GTCGAGTATTAACTAAATTATCTTCCAAGCTTAGAGGGAGATCACCGGAATCTACTCAACCACGATCATCATTATCCTTC ATTACTCCAAAATTGATTCTTAGAGTACTAGTGGTTGCAGGAATTGCAGTTGCATGGCACTACTACTCGCAATGA
Protein sequence (LotjaGi3g1v0084100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALLIKPCLLLCLLLLLLLLLPIPSPAAGAEEEEFSEELLLKPLPDRKVLAHFHFQSEAPLAEHSFARHHHLFPKSIAQL VKKFHIKAMELSFTQGRWNYERWGGFDPISSRNAKPPGVELWAVFDVPLDQVDASWKNLTHSLSGLFCASINFLESSTSY SAPKWAFQSALGSLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRSFYHSQRLHLSISGASADGLDSQVI LEQTLTVVLQPNIQRAGMNYLSETKIQPSWSLSSIFGRKINGRCVLAKLSNVYLQLERGLVAQIENLQKNTAVYAANDSG PDDFRRNIGFELSVMPDRVHREVEKSSSILYEYPIKEYKDTEQFDLGLTWKHPVVWSSPHAPLYASRFLMGSGNERGTIS ISMKSTELSQGFIATNNTGERCKLQVNVLQIVPWYIKVYYHTLQLLVDERIQVVSDFVERMRVSPSEDKVSTGVMELVLR FPCEVKSALLNIEFDKGFLHIDEYPPDANQGFDIPSAIISFPDFHAGLQFSDDSISKTPMLSKLQEKSPVLSYTEVLLVP LTTPDFSMPYNVITITCTIFALYFGSLLNVLRRRVGEEERLLKNKDATKGAFLRRVLTKLSSKLRGRSPESTQPRSSLSF ITPKLILRVLVVAGIAVAWHYYSQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 30 | 30 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 27 | 27 | - | – | |
| SignalP_EUK | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 1 | 29 | 29 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 8 | 21 | 14 | - | – | |
| PANTHER | 12 | 626 | 615 | 1.7E-231 | ||
| Phobius | 22 | 29 | 8 | - | – | |
| Pfam | 29 | 611 | 583 | 1.7E-176 | ||
| Phobius | 30 | 569 | 540 | - | – | |
| TMHMM | 569 | 591 | 23 | - | – | |
| Phobius | 570 | 591 | 22 | - | – | |
| Phobius | 592 | 644 | 53 | - | – | |
| Phobius | 645 | 662 | 18 | - | – | |
| TMHMM | 645 | 662 | 18 | - | – | |
| Phobius | 663 | 664 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Attachment of GPI anchor to protein | A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain. | ||
| Cellular component | GPI-anchor transamidase complex | An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxyl-terminus of a precursor protein to a GPI-anchor. |
Expression pattern of LotjaGi3g1v0084100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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