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LotjaGi3g1v0099800.2

Overview

Field Value
Gene ID LotjaGi3g1v0099800
Transcript ID LotjaGi3g1v0099800.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Monoterpene synthase; TAIR: AT4G16740.1 terpene synthase 03; Swiss-Prot: sp|Q93X23|MYRS_QUEIL Myrcene synthase, chloroplastic; TrEMBL-Plants: tr|A0A072V9D0|A0A072V9D0_MEDTR Monoterpene synthase; Found in the gene: LotjaGi3g1v0099800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:12412349..12418882) extracted from Lotus japonicus Gifu genome v1.2.

GGAAAAGTATGTTCAATGTATTAATTACTATCACTCATATTTATCCTCGTGCACATCCTATTTATATAGGTTTGATTTGG TTTTGATATTAGCATAGAAAGCGAAGAAAACTAATATGGCTCAGCAAAAACTTGCAACATTCCCACTTAGCTTAACTAAA ATCACTTTTCCACGGGAAAGAAAGACTTCATCTCAAGTCATGAGAAGCGCCAAGGTCTCTTGGGCAACTCAATGCAAGGC ATCATATAATGTTCACAGTCAAACAATTTTTCGTCGATCAGCAAATTACCAACCATCAATTTGGACTTTTGATTATATCC AATCATTAAATACAGAGTATAAGGTAATTTTTTTTTTTGTTTTTGTTTCATCTGTGTAAAATTTCAACAAACCTCCATCT AACTAGGTACAAGTAGTACTTGTCTGCCATATTTAGGCTAATATGTACTTATTGCAGGAAGAAATCTACACACAGCGAGT AAGAGTGCTAAGGGAAGAAGTAAGGATGTTGCTTTGCAAAGTGGAAAGTGAGCTTGATCAACTTGAGTTTACTGATGCCT TGCAACGACTTGGAGTGGATTATCATTATGACCATGAAATAAGAAAGTTCTTGGATGATATTTTCAAAATGAACACCTTG AATGAGGAAAATGATTTATATGCTACGACACTCAAATTTAGACTCTTAAGGCAGCATGGTTATAATATATCTTCAGGTTT GTACTCATTCTAAGATTAAACTTTTATATATATATATATATATATATATATATAATGGTGTGTTTATTAGTGTGTTTGTT GTTATAGATGTTTTTATTCGCTTTAAGGATGATAAAGGTAACTTAAAGAAAGACCATACTCTTGATGTGAAGGGAATGTT ATCATTATATGAAGCATCATTCCATTCATTTGAAGATGAAACTATATTAGATGAAGCAAAAGATTTTACCTCAAAATTTC TGAAAGAATATTGGACCGAGGAAAAAGGTAACAACTACACATCACTTTTAATCAATCATGCTTTGGAGCTACCATTACAT TGGAGGAATCCTAGATGGGAGACTCAGTGGTTCATTAATGTATATGAAAGAAAGGAAAACATGATTCCTACTTTGCTTCA GCTAGCTAAACTTAATTTCAACATTGCTCAAGCCATCTATCTAGAAGAACTCAAGGAATCATCCAGGTGAGTCTAAATTA TTTTATTCTGAGACGCTTGTGCTTTTCAATGATCTCTTTAGCTTAACAAAAAAAAAAACGCTTTACTTATAGTTTCTTGG TTAAAATTAAATCCACCTCAAGTCATAATTCTTGAATGGTATAAAGTGATGATATCATTTTTCTTTTACACACATTAATT ATGTGTGTTTCTTTTAGTATGACTTTTTTGAAATCATTAATTAAGATTAGGCTTTGTCAATTATGCATGGAATAAGAAAA ATTTGATTTACAAGTTAAAAAAGTTTTTTTATAAATTAATTTTACCACATAAGAAAAATATATATATATTAAATGTCTGG AGAAAAAACATAGTTTATGGATGGACGTTGTACATGATAGATCATCTAAAAAACAACAAGATATTCCAAAAAATGAAACA CAACTTCTCCAACTAAAACCTCTTTTAAACGAATCAAAATACACTAATTATATTCATGAATTAATTGATACTAATTATTT TTAATAATATTTCTTATGAATAAATACATATTATTTCTCTATTTAATAACTTAATTACTTTAATTAATTAATAAATTATC ATTAATTAATACGTAGAAATGCGAGCGACCACGTCAGCACAGTTACAAGTTCATGACCATACTCCCATCTATGGGGACCA TCTTGTTTCTATCCCCACATCGACCACTAATATTTCATTGTTCTTAGTGGCCCAGAAGCTGTTTGTGCTCAATCGAGTCG ACCCTAGCCGCTTCCCGCAATGCTTTGCACGTCAATTTGGCTTGGTACAAGGGGTGCCTGCTTCAATAGCTTCTCGTGTC ATGCCTTCCCCATCATCAACTAGTTGATACAGTTGTCGTCTTAACTAGGGACTTCCAAGATTCTCGAGAGAAGTTGCGCG CGGGCATTCCAATTATACCCTTTTGACATTCGTCCTGGCACAATAGTTGATTTTAGTAACCGGTGGCAAGTCCACGATTG CCTCGACCCACTACAACATTTATTGTTTTTGGGAACAGTTGAAAAGGGATTAATGGTCAAATTAGTCTCTGAGTTTGTAA GGGAGAGGGACTAAACATCATTTTTTGTCAGAGGGACTAAAATCAAACTCGTTTACAAACTCATGAAATAATTTTACCAT TAACCCGTTGAAAGTGTAGCCATAAACACAAAAGGTAACAGCTTTTATATTTTACAATTTCACGCAACACTTTTTAGTTG TCTCATGTTCTGGCGTTACCTATTCCTTTTAGGGACAATTTTTTGTGTTCTCTAGTAACACTGTGAGAAAATGTAACCTA TTGTAGAGAAAATGCAACAATTATCACGTAATAAGTTCCCTATTATTATATAGAGAACACTTATTTAGTGTTGTTATAAA ATGTGTTGCCTAAAACGAACCATTTATGGCAACATGCACAAACTAATTCTTGAGACACTTTTAGCAACGGTTTTTGCTTG TTGTATATACTTTTAGCAACACTTTTTGCTTGTTGTATATACCCTTGTTGCTAAAAGCAAAGAATGGTGTAGTGACTTGT GCCTAAGGATCGACAATGGGATGTTCGGCAAGAAATCGGCCATTGCTTGTCCTTTGATAGCCCTTTGGGGCACATAGAAG CTTTTGCTTCCTTCGGATGAAACCCTTTGTGCATGGCTCTTTTGCAACACCAGCACGTGAAACGTTTCGATTGTCTTATA GCCGTTACACATTTTGGGTGCCAATAGATATAAACTTGTTCATTTTTCTAGAAGAGATTATTTTTAACATTTTAAGAATA TTAAAACAGTTTTATAAAATTTTAACTTTTTCAGAGAAACTTGTGTAAATATTTTAAATGTTTCAAACATACTGCTTTAA TAAAAAATTACTTTTAAAAACAAGGAATCTGTTAAATTCATGCTCATTTGAGAGTTTGTTCTCAAGTTTTATCCCCTTTT TATTTTTGTTTGATTGGGAAGAAAGTCTTATCCCTTTATTTTTTTGGTACAAAGCTGCTTAAAGAAACGAAAAAAAAACT ACTTCTTTGTTTTAAAAAAAGAATTAAACTTCTAGAAATATGAGCTAAAAATTCATAATAAAAAACTTTTTTTCACATTA ATTACTAGTAAGAAAGTTGAATCATATATATATGTTGAAAAATTGCTATTAAAACTCACATTCTAACCCTCTCATTTATT GGTTGAGTTTATGAGAAATCTACTAAATTAGGTGCGTCCCACCTAACTTTGTAGGAATCACATGGTGGAATTCAATTTTC AACCGATAAATGAAAGAACGTTGTTAAAATGAGTGTTGTTAGTTTTTTTTTTAAAACTGATGATAGTACTCTTTATAAAC TGTTTAATAGCTCCTCTTGTCTGAATCATTGAAAATATGTGAAATTTAAGGTTTTTATTTTTCAGTAGCTACTTCATATA TGTGCATCGATTGCAGACATTTCTAGAGCACTTTTAATTTAGGGGTACTACTGTCGCTTCCTTATACTAAAGCTCATAAC TTTTTTCCTTTTTTCAAGATGGTGGAAAAGAGTTGGCCTTGGTGAAAAGTGTAGTTTTGCTAGAGATAGGTTGGTCGAAA ACTATGTTTGGACCGTGGGAGCAAATTCTCATCCCGACCTTGAATATTACAGAAAAAGTATGACTAAGATCAATTCCCTA ATTACTATAATTGATGATATTTATGATGTGTACGGTACCTTTGAAGAACTAAAGCTTTTCACAGAAGTAATTGGAAGGTT AGCATTGCTCAACAATGATTTTCTTTACCCATTTTAATTTTAATTTTTCTCCTTTGATAAATATTATTCATATTTTTCTT GTGATTCTAGTTGGGATTTAAATGCTATGGATAGTCTCCCAAACTATATGAAAACATGCTTTCAAGCACTCAATAACATC GTCAATGAAATTGCTTGTGAAAACCAAGAGAAGAATGGGTACAATATCACCGCATACCTAATTAAAACGGTAAATAATTA TTTGCTATATTATCTGATTCCTCTTATATATACATCTTTTTATTAGAATTTGTACGTATAAAATAATTATGCTTAACTAA TAAGAGTATTTCCGCTCCTTTTATTAGTGGGCAGATCTATGTAAATCATATTTCATTGAAGCAAAGTGGTACTATAGTGA ATATATGCCAAGCCTTGAAGAATACCTAGGAAATGCTTGGATTTCCATCAGTACACCTCTTCAACTTATTCATACTTACT TCTTGATTCCACATTCAATCAATATGGAAGAGTTGAATAACATGGAAAAATACTCGGACATAATTCAATTTTCAGCAATG ATCTCACGCCTTGCTAATGATCTTGGAACATACAAGGTACGTCTCCTACCAATCTCATTCTTGTTCATTGCAAAACTATT AATTTTCTTCTTACTAATATTTTTCCACTACCATTTTTAGCGTGAAAATGAGATGGGTGATGTTGCTAAGTCAATTCAAT GCTACATGAATGAAAGTGGAGCTTCTGAAGTAGAAGCTCGTGAGTATTTAAAGTCAGTGATGTATAAAACATGGAAGAAG ATGAATGAAGCGACTTATAATTGTTCTTTCTCTCAATGTTTCATAAGTACAACTGTAAACCTTACAAATATGGCATTGTG CATGTACCAGCGGGGAGATGGCCATACCATTCAAGATCCTGAAATTAAGAGTCGTATACTATCATTAGTTATTAAACCCA TTCCTCTTACGTACACAAAGAAATAGTTAATACCAGTGGCGGATCCAGGACCCCGGGGTCAGGGGGTTCAAATTTTTCAA ATGAGCACATCGATAGAAATATGATTAAAAACAACTGTAATATGTTAACACCTTGATCATTAGGATGATATGTTGTAATT CTGGGTCGCAATCCAGGATCCGATGGCAACTCATTTAGATTTACTTCAATAGGAGGAACTTGTTGTTGTGATGAGCTTGA TCCACATTGCTCACTTGATGACCTTGCTCTCTTTATTAAAAATTTATCCATGACCTTCATTAGATTCATTCATGACAAAC TTGAGCAATTTGAAAACATTTCCATTCAAATTCCAATCTCAAACCAATTACTAAATCAAACCATTTAAATCAAACCAATT ACTCTCATGTAAATCAAACCAATTACTCTCAAACCAATTACTCCCATTTTAAGCAAACTAGTGTATGTAAAATACAATAT CAAATTATCAATATATCATCTAATCATCCCAATATCCCAGCCAACAATTCAACATTCAACAATTGACAAATTCAACATTC CATGTTGGAAGTCCTTAATTGCTGCCTAGAGGCTCAGCTTCAAAGAGAGCAGAAAACCCCTTAATTGCTGCCTGGCATCT ATCTGAAACATAGAGGTTGGCAAACACAGAGGAAGAGATTGAAATCTAGGATGTCTTGTTATGCCTTGCTCTCAGATTTT ATTGAAGCCAAAAAGAATAGAAGTGCGTTATATAGGATCTGTAAGTGGGAAGGTTTTTACATAAGGTTGTATAGAGGACA TAAGATTCAGACTTTGTTTTAATAATCAATTCTTGACGAACAGACAAACGTTTTGGTTTGGTTTGTGTAAAATCTACAAG TTTGTTGAGCCTGCAAAAAAAAAACAAATTCAACATTCCAGCCAACAATCATCCCAATATCCCAGCCAACAATTCAACAT TCAACATCCTAAAGCTCCTGGACCTGGTACTGGTAGTGCTCCTTTTGACAAATTCAACATTCCAGCCAACAATTGACAAA TTGATTTCAGCAAATTCAACAATTGACAACATACACTACTTTCAAACTCAGCAAAAGGGAAAGCAAATCAAAATAATAGA AGTTAGGGTTTTCAATTTGGGGTTTTTCAATTTGGGGGTTTTCAATTCCAACCAACCTTCAAGGCTTCAAGCTTCAACAG AGAGAGAGAGAGTGGGTGGTGGCGTGCGCCGGCCGCCGGCGGTGCTGTGGTGGCGTGGCCGCGTGGTGCTTGAGTGAGGA AGAAGAAGAACCAGTCGTGACTCGTCACTCGTGAGAGAGAGAGAGAGAGGTAGTGAGCACTGAGCAGAGAACTGAGAGAA GGATTGTGGTGCGTGAGTGCGTCGGCTGGATCGGTGGAGGACCGGAGGTGGTGCGTCGGCTGGATCGGTGGAGGTGGTGG TCAAGAGAAGCTGAGAAGGAGAAGAATCGTTCGTGAGTAGAGAGAGACTGAGGTCTGAGAGTGAGAATGGCTGAATGAGT GCGTGAGAGAGAGTGAGGCTGCTGGGATCTAGGTGCAATTTTTTAATTTCAGGGGGTTCAAAAAAAAATTACTATAGGGG GGTATGTAGGAATTTTTTTTTTCAGGGGGTTCAACTGAACCCCCTGAACTCAAC
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0099800.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTCAGCAAAAACTTGCAACATTCCCACTTAGCTTAACTAAAATCACTTTTCCACGGGAAAGAAAGACTTCATCTCA AGTCATGAGAAGCGCCAAGGTCTCTTGGGCAACTCAATGCAAGGCATCATATAATGTTCACAGTCAAACAATTTTTCGTC GATCAGCAAATTACCAACCATCAATTTGGACTTTTGATTATATCCAATCATTAAATACAGAGTATAAGGAAGAAATCTAC ACACAGCGAGTAAGAGTGCTAAGGGAAGAAGTAAGGATGTTGCTTTGCAAAGTGGAAAGTGAGCTTGATCAACTTGAGTT TACTGATGCCTTGCAACGACTTGGAGTGGATTATCATTATGACCATGAAATAAGAAAGTTCTTGGATGATATTTTCAAAA TGAACACCTTGAATGAGGAAAATGATTTATATGCTACGACACTCAAATTTAGACTCTTAAGGCAGCATGGTTATAATATA TCTTCAGATGTTTTTATTCGCTTTAAGGATGATAAAGGTAACTTAAAGAAAGACCATACTCTTGATGTGAAGGGAATGTT ATCATTATATGAAGCATCATTCCATTCATTTGAAGATGAAACTATATTAGATGAAGCAAAAGATTTTACCTCAAAATTTC TGAAAGAATATTGGACCGAGGAAAAAGGTAACAACTACACATCACTTTTAATCAATCATGCTTTGGAGCTACCATTACAT TGGAGGAATCCTAGATGGGAGACTCAGTGGTTCATTAATGTATATGAAAGAAAGGAAAACATGATTCCTACTTTGCTTCA GCTAGCTAAACTTAATTTCAACATTGCTCAAGCCATCTATCTAGAAGAACTCAAGGAATCATCCAGATGGTGGAAAAGAG TTGGCCTTGGTGAAAAGTGTAGTTTTGCTAGAGATAGGTTGGTCGAAAACTATGTTTGGACCGTGGGAGCAAATTCTCAT CCCGACCTTGAATATTACAGAAAAAGTATGACTAAGATCAATTCCCTAATTACTATAATTGATGATATTTATGATGTGTA CGGTACCTTTGAAGAACTAAAGCTTTTCACAGAAGTAATTGGAAGTTGGGATTTAAATGCTATGGATAGTCTCCCAAACT ATATGAAAACATGCTTTCAAGCACTCAATAACATCGTCAATGAAATTGCTTGTGAAAACCAAGAGAAGAATGGGTACAAT ATCACCGCATACCTAATTAAAACGTGGGCAGATCTATGTAAATCATATTTCATTGAAGCAAAGTGGTACTATAGTGAATA TATGCCAAGCCTTGAAGAATACCTAGGAAATGCTTGGATTTCCATCAGTACACCTCTTCAACTTATTCATACTTACTTCT TGATTCCACATTCAATCAATATGGAAGAGTTGAATAACATGGAAAAATACTCGGACATAATTCAATTTTCAGCAATGATC TCACGCCTTGCTAATGATCTTGGAACATACAAGCGTGAAAATGAGATGGGTGATGTTGCTAAGTCAATTCAATGCTACAT GAATGAAAGTGGAGCTTCTGAAGTAGAAGCTCGTGAGTATTTAAAGTCAGTGATGTATAAAACATGGAAGAAGATGAATG AAGCGACTTATAATTGTTCTTTCTCTCAATGTTTCATAAGTACAACTGTAAACCTTACAAATATGGCATTGTGCATGTAC CAGCGGGGAGATGGCCATACCATTCAAGATCCTGAAATTAAGAGTCGTATACTATCATTAGTTATTAAACCCATTCCTCT TACGTACACAAAGAAATAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0099800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAQQKLATFPLSLTKITFPRERKTSSQVMRSAKVSWATQCKASYNVHSQTIFRRSANYQPSIWTFDYIQSLNTEYKEEIY TQRVRVLREEVRMLLCKVESELDQLEFTDALQRLGVDYHYDHEIRKFLDDIFKMNTLNEENDLYATTLKFRLLRQHGYNI SSDVFIRFKDDKGNLKKDHTLDVKGMLSLYEASFHSFEDETILDEAKDFTSKFLKEYWTEEKGNNYTSLLINHALELPLH WRNPRWETQWFINVYERKENMIPTLLQLAKLNFNIAQAIYLEELKESSRWWKRVGLGEKCSFARDRLVENYVWTVGANSH PDLEYYRKSMTKINSLITIIDDIYDVYGTFEELKLFTEVIGSWDLNAMDSLPNYMKTCFQALNNIVNEIACENQEKNGYN ITAYLIKTWADLCKSYFIEAKWYYSEYMPSLEEYLGNAWISISTPLQLIHTYFLIPHSINMEELNNMEKYSDIIQFSAMI SRLANDLGTYKRENEMGDVAKSIQCYMNESGASEVEAREYLKSVMYKTWKKMNEATYNCSFSQCFISTTVNLTNMALCMY QRGDGHTIQDPEIKSRILSLVIKPIPLTYTKK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31225
52 586 535 9.9E-217 –
PANTHER
PTHR31225:SF9
52 586 535 9.9E-217 –
CDD
cd00684
53 584 532 0.0 –
SUPERFAMILY
SSF48239
59 260 202 2.35E-62
IPR008930
Gene3D
G3DSA:1.10.600.10
62 570 509 1.4E-190
IPR008949
Pfam
PF01397
62 235 174 2.0E-49
IPR001906
Gene3D
G3DSA:1.50.10.130
99 260 162 1.4E-190
IPR036965
SFLD
SFLDS00005
263 585 323 0.0 –
SUPERFAMILY
SSF48576
263 587 325 1.04E-94
IPR008949
SFLD
SFLDG01019
263 585 323 0.0
IPR034741
Pfam
PF03936
266 531 266 6.4E-94
IPR005630

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0010333
Molecular function Terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
Subterm of
GO:0016829
Molecular function Lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0099800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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