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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR034741
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We have found 20 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.777s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi2g1v0279700.1
n.a. Nerol synthase; TAIR: AT1G61680.1 terpene synthase 14; Swiss-Prot: sp|P0CV94|NES1_FRAAN (3S,6E)-nerolidol synthase 1; TrEMBL-Plants: tr|A0A072UY90|A0A072UY90_MEDTR (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase; Found in the gene: LotjaGi2g1v0279700 LjG1.1_chr2 75105781 75109278 -
2 domain predictions
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LotjaGi3g1v0095100.1
n.a. Sesquiterpene synthase; TAIR: AT5G23960.2 terpene synthase 21; Swiss-Prot: sp|Q6Q3H3|TPSGD_VITVI (-)-germacrene D synthase; TrEMBL-Plants: tr|Q5UBY0|Q5UBY0_MEDTR Sesquiterpene synthase; Found in the gene: LotjaGi3g1v0095100 LjG1.1_chr3 11828877 11883497 +
2 domain predictions
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LotjaGi3g1v0099800.2
n.a. Monoterpene synthase; TAIR: AT4G16740.1 terpene synthase 03; Swiss-Prot: sp|Q93X23|MYRS_QUEIL Myrcene synthase, chloroplastic; TrEMBL-Plants: tr|A0A072V9D0|A0A072V9D0_MEDTR Monoterpene synthase; Found in the gene: LotjaGi3g1v0099800 LjG1.1_chr3 12412349 12418882 -
2 domain predictions
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LotjaGi3g1v0101800.1
n.a. Sesquiterpene synthase; TAIR: AT5G23960.2 terpene synthase 21; Swiss-Prot: sp|Q6Q3H3|TPSGD_VITVI (-)-germacrene D synthase; TrEMBL-Plants: tr|Q5UBY0|Q5UBY0_MEDTR Sesquiterpene synthase; Found in the gene: LotjaGi3g1v0101800 LjG1.1_chr3 12618152 12637091 -
2 domain predictions
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LotjaGi3g1v0103100.1
n.a. Monoterpene synthase; TAIR: AT4G16730.1 terpene synthase 02; Swiss-Prot: sp|Q93X23|MYRS_QUEIL Myrcene synthase, chloroplastic; TrEMBL-Plants: tr|A0A072V9D0|A0A072V9D0_MEDTR Monoterpene synthase; Found in the gene: LotjaGi3g1v0103100 LjG1.1_chr3 12759096 12767036 -
2 domain predictions
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LotjaGi3g1v0103100.2
n.a. Monoterpene synthase; TAIR: AT4G16730.1 terpene synthase 02; Swiss-Prot: sp|Q93X23|MYRS_QUEIL Myrcene synthase, chloroplastic; TrEMBL-Plants: tr|A0A072V9D0|A0A072V9D0_MEDTR Monoterpene synthase; Found in the gene: LotjaGi3g1v0103100 LjG1.1_chr3 12763864 12767021 -
2 domain predictions
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LotjaGi3g1v0193400.2
n.a. Sesquiterpene synthase; TAIR: AT4G16730.1 terpene synthase 02; Swiss-Prot: sp|B9RHP7|TPS11_RICCO Probable terpene synthase 11; TrEMBL-Plants: tr|K7LVZ0|K7LVZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0193400 LjG1.1_chr3 27965188 27970526 +
2 domain predictions
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LotjaGi3g1v0224000.1
n.a. Sesquiterpene synthase, putative; TAIR: AT5G23960.2 terpene synthase 21; Swiss-Prot: sp|F6M8H7|SMST_SANMU Probable sesquiterpene synthase; TrEMBL-Plants: tr|A2Q649|A2Q649_MEDTR Terpene synthase family, metal-binding domain protein; Found in the gene: LotjaGi3g1v0224000 LjG1.1_chr3 34305369 34309325 +
2 domain predictions
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LotjaGi3g1v0224100.1
n.a. Sesquiterpene synthase, putative; TAIR: AT5G23960.2 terpene synthase 21; Swiss-Prot: sp|Q6Q3H3|TPSGD_VITVI (-)-germacrene D synthase; TrEMBL-Plants: tr|A2Q649|A2Q649_MEDTR Terpene synthase family, metal-binding domain protein; Found in the gene: LotjaGi3g1v0224100 LjG1.1_chr3 34343126 34349262 +
2 domain predictions
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LotjaGi3g1v0249900.1
n.a. Monoterpene synthase; TAIR: AT4G16730.1 terpene synthase 02; Swiss-Prot: sp|Q93X23|MYRS_QUEIL Myrcene synthase, chloroplastic; TrEMBL-Plants: tr|A0A072V9D0|A0A072V9D0_MEDTR Monoterpene synthase; Found in the gene: LotjaGi3g1v0249900 LjG1.1_chr3 41628363 41631075 -
2 domain predictions
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LotjaGi3g1v0334200.1
n.a. Sesquiterpene synthase; TAIR: AT5G23960.2 terpene synthase 21; Swiss-Prot: sp|Q6Q3H3|TPSGD_VITVI (-)-germacrene D synthase; TrEMBL-Plants: tr|Q5UBY0|Q5UBY0_MEDTR Sesquiterpene synthase; Found in the gene: LotjaGi3g1v0334200 LjG1.1_chr3 70382156 70385366 -
2 domain predictions
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LotjaGi3g1v0462800.1
n.a. Terpene synthase; TAIR: AT3G25820.1 terpene synthase-like sequence-1,8-cineole; Swiss-Prot: sp|Q672F7|TPS2_LOTJA Tricyclene synthase EBOS, chloroplastic; TrEMBL-Plants: tr|I1LRT2|I1LRT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0462800 LjG1.1_chr3 87786944 87790523 -
2 domain predictions
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LotjaGi3g1v0462800.2
n.a. Isoprene synthase; TAIR: AT3G25820.1 terpene synthase-like sequence-1,8-cineole; Swiss-Prot: sp|Q672F7|TPS2_LOTJA Tricyclene synthase EBOS, chloroplastic; TrEMBL-Plants: tr|A0A151S688|A0A151S688_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0462800 LjG1.1_chr3 87787014 87811432 -
2 domain predictions
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LotjaGi3g1v0546500.1
n.a. Terpene synthase; TAIR: AT4G16740.1 terpene synthase 03; Swiss-Prot: sp|B9RXW0|TPS7_RICCO Alpha-farnesene synthase; TrEMBL-Plants: tr|I1MS82|I1MS82_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0546500 LjG1.1_chr3 96287768 96296075 +
2 domain predictions
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LotjaGi3g1v0546500.2
n.a. Terpene synthase; TAIR: AT4G16740.1 terpene synthase 03; Swiss-Prot: sp|B9RXW0|TPS7_RICCO Alpha-farnesene synthase; TrEMBL-Plants: tr|A0A151TLR2|A0A151TLR2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0546500 LjG1.1_chr3 96291480 96296027 +
2 domain predictions
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LotjaGi4g1v0043400.1
n.a. Terpene synthase; TAIR: AT2G24210.1 terpene synthase 10; Swiss-Prot: sp|Q672F7|TPS2_LOTJA Tricyclene synthase EBOS, chloroplastic; TrEMBL-Plants: tr|K7KY89|K7KY89_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043400 LjG1.1_chr4 5135604 5142936 -
2 domain predictions
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LotjaGi4g1v0046100.1
n.a. Terpene synthase; TAIR: AT1G61680.1 terpene synthase 14; Swiss-Prot: sp|P0CV94|NES1_FRAAN (3S,6E)-nerolidol synthase 1; TrEMBL-Plants: tr|K7L2K8|K7L2K8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0046100 LjG1.1_chr4 5408200 5420415 +
2 domain predictions
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LotjaGi5g1v0112300.1
n.a. Linalool synthase; TAIR: AT1G61680.1 terpene synthase 14; Swiss-Prot: sp|P0CV94|NES1_FRAAN (3S,6E)-nerolidol synthase 1; TrEMBL-Plants: tr|K7L2K6|K7L2K6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0112300 LjG1.1_chr5 22266792 22274334 -
2 domain predictions
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LotjaGi5g1v0112300.2
n.a. Linalool synthase; TAIR: AT1G61680.1 terpene synthase 14; Swiss-Prot: sp|P0CV94|NES1_FRAAN (3S,6E)-nerolidol synthase 1; TrEMBL-Plants: tr|K7L2K6|K7L2K6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0112300 LjG1.1_chr5 22266792 22274334 -
2 domain predictions
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LotjaGi6g1v0344200.1
n.a. Nerol synthase; TAIR: AT1G61680.1 terpene synthase 14; Swiss-Prot: sp|P0CV94|NES1_FRAAN (3S,6E)-nerolidol synthase 1; TrEMBL-Plants: tr|G7IK35|G7IK35_MEDTR (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase; Found in the gene: LotjaGi6g1v0344200 LjG1.1_chr6 65676825 65680237 -
2 domain predictions
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