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LotjaGi3g1v0101000.2

Overview

Field Value
Gene ID LotjaGi3g1v0101000
Transcript ID LotjaGi3g1v0101000.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Phospholipid-transporting ATPase; TAIR: AT5G04930.1 aminophospholipid ATPase 1; Swiss-Prot: sp|P98204|ALA1_ARATH Phospholipid-transporting ATPase 1; TrEMBL-Plants: tr|A0A151SJQ0|A0A151SJQ0_CAJCA Phospholipid-transporting ATPase; Found in the gene: LotjaGi3g1v0101000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:12529167..12534105) extracted from Lotus japonicus Gifu genome v1.2.

GGCACTTCTAAGAGGCCACTTCTATTACCATCTCCAAGAACTCCCAATCAACAAGATTTTCCTACCATTCCAGTTTTTTC TGAGCTATCCAAATCAAAGTCAAGTTCCAGCAACACTGTTACTTTCTCTGGGGTGGATACTAGCAACCCAGTTGAGAAGA ACTCATCAAATTCATCACCATCCATGTCAATTCACTCTGAGAGGAGCAACTCTGTTAAGGAAGTGAGTTTCTTACCTTCA GGGTCAAAGAGGCTACCTGTTCGTTATGGCTCCTCAAAGGGTGGTGGTGGTGATTCTGGAAGACTCAGCATGTCTCAGAG GGAACTCAGTGATGAAGATGCACGAATTGTTTGTATAGATGACCCTGAGAAGACGAATGAGACGGTTCAATTCGCAGGAA ACTCAATCCGCACCGCGAAATACTCCATCCTCACTTTCATCCCAAGGAATCTGTTTGAACAGTTTCATAGAGTTGCTTAT GTGTATTTTCTGATAATTGCAATTCTCAATCAGCTTCCTCAGCTTGCAGTGTTTGGGAGGGGTGTTTCAATTTTGCCATT GGCTTTTGTCCTGCTTGTTACAGCTGTGAAGGATGGCTATGAAGATTGGAGGAGGCACCAGTCTGACAAAGTTGAGAATA ACAGGTTAGCATCAGTTTTGGTTAATGGTGAATTTGTAGAGAAGAAATGGACTGATATAAGGGTTGGTGAGATCATAAAA ATCAATGTAAATGAGGCTATTCCTTGTGATATTGTGTTGCTCTCAACTAGTGATCCAACTGGGGTTGCATATGTGCAGAC CCTGAATCTTGATGGAGAGTCCAATTTGAAGACTAGGTATGCAAAACAAGAGACAGGTTCAAAGGTGCCTGGGAAGGACA GCTTGAATGGTTTGATCAAGTGTGAGAAGCCAAACAGGAACATTTATGGGTTTCATGGCAACATGGAAGTTGATGGCAAG AAATTGTCACTAGGATCCTCCAATATTGTTCTTAGAGGGTGTGAGCTCAAGAATACTATTTGGGCAATTGGTGTTGCTGT GTATTGTGGGAGTGAAACCAAAGCAATGCTCAACAGTTCAGGAGCTCCATCAAAGAGGAGCCGGCTCGAGACGCGGATGA ATTCTGAAATCATCATGCTCTCTTTCTTTCTTGTAGCACTGTGTACAGTCACCTCAGTTTGTGCTGCTGTTTGGTTAAAG CGCCACAAGGATGAGTTGAATCTCTTGCCTTATTATAGGAAGCTTGATGTTTCAGAAGGGGAAAATGATACCTATAAATA CTATGGATGGGGGTTCGAAATCTTGTTCACATTCCTCATGTCAGTTATAGTGTTCCAGGTCATGATTCCTATATCCCTGT ACATTTCTATGGAGCTTGTTCGTGTTGGCCAGGCTTACTTCATGATCCGGGACAACCGAATGTATGATGAGGCAACAAAT GCTAGATTTCAGTGCAGGGCTTTGAACATTAATGAAGATTTGGGGCAGATTAAATATGTATTCTCAGATAAAACAGGTAC ACTTACTGAGAATAAGATGGAGTTTCAATGTGCTAGCATCTGGGGGGTTGATTACAGTTCTACGAAAGATGAGGAAGTTG AGAACTCTGTGCAAGGTGAGGTTTCTTAATTCGTCCTGAGATATGTGTTCTGTTCTAGTAGTCCATTGATATTATTTTTG TTTATAATTGAAATGACATGTTTTGTTTTCTGTCATTGTATGTTCTCAGTGGATGGAAAGATCTTGAGACCGAAGATGAA GGTGAAAGTTAATCTGGAGCTTTTGCGGTTAGCAAGAAGTGGAGTTGGAAATATGGAAGGAAAAAGGATTCGTGATTTTT TCCTAGCACTGGCAACCTGCAATACTATTGTGCCTATTGTAGTTGACACACCTGATCCTGATGTCAAGCTGATAGATTAC CAAGGGGAGTCACCAGATGAACAAGCATTAGCATATGCTGCCGCCGCCTATGGTTTTATGCTTATAGAACGAACCTCAGG CCATATAGTCATCGATATTCATGGAGAAAGACAAAAGTAAGTTGAATTTTTTGTTTTTACTCACAAACTTACTATTTTTA CAATGACAATATCTTGTTCATAGTGTAATGTTAATGTTAATTTTCTTCAACCAGATTGGAAAGGGTGTCTGAAAATATTT TGATGGGTTTTCTTGTGCATTTTGTTGTTTTACCAATATATATATATATATATATATATATATATATATATATATATATA TATATATATATATGTAATTACTAGTAGTGATCATTAATGTCATTAAAGGAAGTCTTGTATATGCTGTATGCATTGTTGGT CTTCCTTTTTCCCTGGCTATGTGATTGTGTAGTTCACATACATAGTGAGTTTACTTATCTTGATATTTAACAAATAACAT GAAATCTAATGTAATTTGGTAATGGTTATCCTCTTTCTAATGAATCTTTCCATAATGTGCAAAACAGGTTCAATGTCTTG GGTTTGCATGAATTTGACAGTGATAGGAAGAGAATGTCAGTTATATTGGGGAACCCTGACAATTCTGTGAAACTTTTTGT CAAAGGGGCAGATACAACCATGCTTAGTGTGAGAGATAAATCATCTAACACAGACTTAATCAAAGCCACTGAAAACCATC TTCACTCTTTTTCTTCACTGGGTTTGAGGACACTTGTTATTGGGATGAGGGAACTGAATGCATTAGAATTTGAGGAATGG CATGCTGCATATGAGGCAGCAAGCACTGCTTTGTTTGGCAGGTCCGCGTTGCTTCGAAAGATTTCGAACAATGTAGAGAA CAATGTATGCATTTTGGGAGCATCTGCTATTGAAGATAAACTGCAGCAAGGTGTGCCAGAAGCCATTGAGTCTCTAAGGA CTGCAGGCATTCATGTGTGGGTGTTGACCGGGGACAAACAAGAAACTGCTATATCCATTGGATACTCCTCAAAGCTTCTA ACAAACAACATGACTCAGATCGTAATTAACAGCAACAATAGAGAATCATCTAGAAAGAAGTTACAAGATGCCCTTGCCTT GTCTAAAAAGTTCACCAACACTACTGGAGGAAATTCTGATGCAAATTCAAATCAGATAGCTTTGATTATTGATGGTGGCA GCCTTGTACATATTCTTGACAGTGAATTTGAAGAACAGGTTAGTTAGTTCCCTTAATCTTAGATGGTGTTTATAATGTGT TTCTTGCTGATGTCTTATTTGCTAATGTTGGCTGCTTCTGTTGTATCAGCTATTTCAACTTGCAAGTAAATGTTCAGTTG TTCTCTGTTGTCGAGTGGCTCCGCTGCAAAAGGCTGGAATTGTGGCTCTTGTGAAGAAAAGGACTTCTGACATGACACTA GCCATTGGAGATGGTATGAATTTTTCTGTTGACTTGTTTCAGCTTGGCATTCCCCTTGGTAATAAAATTGAAAACCACAA ACAATAATGAAGAGAATGAAAGAAAAGAAAAGTCAACAACATCAACAATGATAACAAAAGCCTTATCCCATTTGATTCAT ATTAAAGATAAGACCAGTTTTACATTGGCTGCTGCAGGCCTAACACAACCTTCTTCCTTTACCCGGGCTAAGGACCGGCT ATGACACTGATAGAAAATAATGAATCATTTTGGATGGGTCTGAATTTTGTTGTAGGTTGTATAATTAAAAATGACTGATT TATGCATGTGTTGCAGGTGCTAATGATGTCTCCATGATTCAAATGGCTGATGTTGGAGTTGGAATCAGTGGACAAGAGGG TCGGCAAGCTGTAATGTCATCAGATTTTGCAATGGGCCAGTTTAGATTTTTAGTTCCTCTCTTGTTGGTCCATGGACACT GGAATTACCAACGGCTGGGTTACATGATACTATACAATTTCTACAGAAATGCTGTCCTCGTTTTTGTCCTATTTTGGTAA GTTATGATCCAACAAATGCTATATGTTGCTGCTTTGGTCATTAAATTTTTAAATCATGCCAAAAACCTCACCTTCAATCA AAAGTTTTTGTTATTGGGGTACTTCACTCAATTCAACCAACCTTGTTATTTAGATTAAAATCAATTTAGTTTTTTTTTAT GGCTAGTTATGTTTTTCTTATAAGCCAATTTTAATTAAACAAAGCACAAGAGGTGCTTTAAACCCGATTACAAAGGAAGA GAAAGTGAGAAACATTGTTCTTTGTCTATTTATGTGCTCAATATTCACTGTATTCATTCAGATTTTAACATGTTAGTACT TTGTTCTTTGTCTCTGCTTTTTCAGGTATGTGCTCTACACTGCTTTCACTTTGACAACTGCTATAAATGAATGGAGCTCC ACATTGTATTCAATAATATACAGTGCACTGCCAACTATCATTGTTGGTATTCTAGACAAGGATCTTGGTAAAAGGACTCT GCTAAAGTATCCTCAGCTCTATGGGGCTGGGCAGAGAGATGAGGCCTACAACAAAAGACTATTCGTGTGGACAATGGCTG ATACTTTGTGGCAAAGCATAGTTATCTTCTGGGCTCCCTTGTTTGCATATTGGAGCAGCACTATTGATGTGGCAAGCATA GGAGACCTTTGGACTTTTGCAGTTGTTATCTTGGTTAATTTACACTTGGCCATGGATGTTGTGAGATGGTATTGGGTGAC TCATGCTTCCATTTGGGGGTCTATTGTTGCAACTTTCATTGCTGTCATGATCATTGATGCTATACCCTCACTTCCTGGTT ACTGGTATGCATAATTTTCTTCTCTCTTTTATAATTTTTATACAATAAATCCAATGTTGTAGCATTCGTGTAAATGTTGA ATGTTTGGAAACTTGTTTGAAAACCACGGTGAAGCCAAAATCATGGTGGACATAAGCAAAAGCTAAAGGAAGTTGTTTCT GTCCATCATGACTTCGGTTGCACCATGGCTTTCGAAAAAGTTTCCAAACATGCACTTAG 

CDS sequence (LotjaGi3g1v0101000.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCAATTCACTCTGAGAGGAGCAACTCTGTTAAGGAAGTGAGTTTCTTACCTTCAGGGTCAAAGAGGCTACCTGTTCG TTATGGCTCCTCAAAGGGTGGTGGTGGTGATTCTGGAAGACTCAGCATGTCTCAGAGGGAACTCAGTGATGAAGATGCAC GAATTGTTTGTATAGATGACCCTGAGAAGACGAATGAGACGGTTCAATTCGCAGGAAACTCAATCCGCACCGCGAAATAC TCCATCCTCACTTTCATCCCAAGGAATCTGTTTGAACAGTTTCATAGAGTTGCTTATGTGTATTTTCTGATAATTGCAAT TCTCAATCAGCTTCCTCAGCTTGCAGTGTTTGGGAGGGGTGTTTCAATTTTGCCATTGGCTTTTGTCCTGCTTGTTACAG CTGTGAAGGATGGCTATGAAGATTGGAGGAGGCACCAGTCTGACAAAGTTGAGAATAACAGGTTAGCATCAGTTTTGGTT AATGGTGAATTTGTAGAGAAGAAATGGACTGATATAAGGGTTGGTGAGATCATAAAAATCAATGTAAATGAGGCTATTCC TTGTGATATTGTGTTGCTCTCAACTAGTGATCCAACTGGGGTTGCATATGTGCAGACCCTGAATCTTGATGGAGAGTCCA ATTTGAAGACTAGGTATGCAAAACAAGAGACAGGTTCAAAGGTGCCTGGGAAGGACAGCTTGAATGGTTTGATCAAGTGT GAGAAGCCAAACAGGAACATTTATGGGTTTCATGGCAACATGGAAGTTGATGGCAAGAAATTGTCACTAGGATCCTCCAA TATTGTTCTTAGAGGGTGTGAGCTCAAGAATACTATTTGGGCAATTGGTGTTGCTGTGTATTGTGGGAGTGAAACCAAAG CAATGCTCAACAGTTCAGGAGCTCCATCAAAGAGGAGCCGGCTCGAGACGCGGATGAATTCTGAAATCATCATGCTCTCT TTCTTTCTTGTAGCACTGTGTACAGTCACCTCAGTTTGTGCTGCTGTTTGGTTAAAGCGCCACAAGGATGAGTTGAATCT CTTGCCTTATTATAGGAAGCTTGATGTTTCAGAAGGGGAAAATGATACCTATAAATACTATGGATGGGGGTTCGAAATCT TGTTCACATTCCTCATGTCAGTTATAGTGTTCCAGGTCATGATTCCTATATCCCTGTACATTTCTATGGAGCTTGTTCGT GTTGGCCAGGCTTACTTCATGATCCGGGACAACCGAATGTATGATGAGGCAACAAATGCTAGATTTCAGTGCAGGGCTTT GAACATTAATGAAGATTTGGGGCAGATTAAATATGTATTCTCAGATAAAACAGGTACACTTACTGAGAATAAGATGGAGT TTCAATGTGCTAGCATCTGGGGGGTTGATTACAGTTCTACGAAAGATGAGGAAGTTGAGAACTCTGTGCAAGTGGATGGA AAGATCTTGAGACCGAAGATGAAGGTGAAAGTTAATCTGGAGCTTTTGCGGTTAGCAAGAAGTGGAGTTGGAAATATGGA AGGAAAAAGGATTCGTGATTTTTTCCTAGCACTGGCAACCTGCAATACTATTGTGCCTATTGTAGTTGACACACCTGATC CTGATGTCAAGCTGATAGATTACCAAGGGGAGTCACCAGATGAACAAGCATTAGCATATGCTGCCGCCGCCTATGGTTTT ATGCTTATAGAACGAACCTCAGGCCATATAGTCATCGATATTCATGGAGAAAGACAAAAGTTCAATGTCTTGGGTTTGCA TGAATTTGACAGTGATAGGAAGAGAATGTCAGTTATATTGGGGAACCCTGACAATTCTGTGAAACTTTTTGTCAAAGGGG CAGATACAACCATGCTTAGTGTGAGAGATAAATCATCTAACACAGACTTAATCAAAGCCACTGAAAACCATCTTCACTCT TTTTCTTCACTGGGTTTGAGGACACTTGTTATTGGGATGAGGGAACTGAATGCATTAGAATTTGAGGAATGGCATGCTGC ATATGAGGCAGCAAGCACTGCTTTGTTTGGCAGGTCCGCGTTGCTTCGAAAGATTTCGAACAATGTAGAGAACAATGTAT GCATTTTGGGAGCATCTGCTATTGAAGATAAACTGCAGCAAGGTGTGCCAGAAGCCATTGAGTCTCTAAGGACTGCAGGC ATTCATGTGTGGGTGTTGACCGGGGACAAACAAGAAACTGCTATATCCATTGGATACTCCTCAAAGCTTCTAACAAACAA CATGACTCAGATCGTAATTAACAGCAACAATAGAGAATCATCTAGAAAGAAGTTACAAGATGCCCTTGCCTTGTCTAAAA AGTTCACCAACACTACTGGAGGAAATTCTGATGCAAATTCAAATCAGATAGCTTTGATTATTGATGGTGGCAGCCTTGTA CATATTCTTGACAGTGAATTTGAAGAACAGCTATTTCAACTTGCAAGTAAATGTTCAGTTGTTCTCTGTTGTCGAGTGGC TCCGCTGCAAAAGGCTGGAATTGTGGCTCTTGTGAAGAAAAGGACTTCTGACATGACACTAGCCATTGGAGATGGTGCTA ATGATGTCTCCATGATTCAAATGGCTGATGTTGGAGTTGGAATCAGTGGACAAGAGGGTCGGCAAGCTGTAATGTCATCA GATTTTGCAATGGGCCAGTTTAGATTTTTAGTTCCTCTCTTGTTGGTCCATGGACACTGGAATTACCAACGGCTGGGTTA CATGATACTATACAATTTCTACAGAAATGCTGTCCTCGTTTTTGTCCTATTTTGGTATGTGCTCTACACTGCTTTCACTT TGACAACTGCTATAAATGAATGGAGCTCCACATTGTATTCAATAATATACAGTGCACTGCCAACTATCATTGTTGGTATT CTAGACAAGGATCTTGGTAAAAGGACTCTGCTAAAGTATCCTCAGCTCTATGGGGCTGGGCAGAGAGATGAGGCCTACAA CAAAAGACTATTCGTGTGGACAATGGCTGATACTTTGTGGCAAAGCATAGTTATCTTCTGGGCTCCCTTGTTTGCATATT GGAGCAGCACTATTGATGTGGCAAGCATAGGAGACCTTTGGACTTTTGCAGTTGTTATCTTGGTTAATTTACACTTGGCC ATGGATGTTGTGAGATGGTATTGGGTGACTCATGCTTCCATTTGGGGGTCTATTGTTGCAACTTTCATTGCTGTCATGAT CATTGATGCTATACCCTCACTTCCTGGTTACTGGTATGCATAA 

Protein sequence (LotjaGi3g1v0101000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSIHSERSNSVKEVSFLPSGSKRLPVRYGSSKGGGGDSGRLSMSQRELSDEDARIVCIDDPEKTNETVQFAGNSIRTAKY SILTFIPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDGYEDWRRHQSDKVENNRLASVLV NGEFVEKKWTDIRVGEIIKINVNEAIPCDIVLLSTSDPTGVAYVQTLNLDGESNLKTRYAKQETGSKVPGKDSLNGLIKC EKPNRNIYGFHGNMEVDGKKLSLGSSNIVLRGCELKNTIWAIGVAVYCGSETKAMLNSSGAPSKRSRLETRMNSEIIMLS FFLVALCTVTSVCAAVWLKRHKDELNLLPYYRKLDVSEGENDTYKYYGWGFEILFTFLMSVIVFQVMIPISLYISMELVR VGQAYFMIRDNRMYDEATNARFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSTKDEEVENSVQVDG KILRPKMKVKVNLELLRLARSGVGNMEGKRIRDFFLALATCNTIVPIVVDTPDPDVKLIDYQGESPDEQALAYAAAAYGF MLIERTSGHIVIDIHGERQKFNVLGLHEFDSDRKRMSVILGNPDNSVKLFVKGADTTMLSVRDKSSNTDLIKATENHLHS FSSLGLRTLVIGMRELNALEFEEWHAAYEAASTALFGRSALLRKISNNVENNVCILGASAIEDKLQQGVPEAIESLRTAG IHVWVLTGDKQETAISIGYSSKLLTNNMTQIVINSNNRESSRKKLQDALALSKKFTNTTGGNSDANSNQIALIIDGGSLV HILDSEFEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSS DFAMGQFRFLVPLLLVHGHWNYQRLGYMILYNFYRNAVLVFVLFWYVLYTAFTLTTAINEWSSTLYSIIYSALPTIIVGI LDKDLGKRTLLKYPQLYGAGQRDEAYNKRLFVWTMADTLWQSIVIFWAPLFAYWSSTIDVASIGDLWTFAVVILVNLHLA MDVVRWYWVTHASIWGSIVATFIAVMIIDAIPSLPGYWYA 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 93 93 -
MobiDBLite 25 48 24 -
PANTHER 44 1078 1035 0.0
PANTHER 44 1078 1035 0.0
Pfam 58 121 64 4.6E-24
SUPERFAMILY 69 1074 1006 6.67E-45
TIGRFAM 70 1072 1003 0.0
CDD 72 1009 938 0.0
TMHMM 94 111 18 -
Phobius 94 111 18 -
Phobius 112 116 5 -
TMHMM 116 135 20 -
Phobius 117 135 19 -
Phobius 136 315 180 -
SUPERFAMILY 153 294 142 1.7E-16
Pfam 155 398 244 1.2E-7
TMHMM 316 338 23 -
Phobius 316 338 23 -
Phobius 339 372 34 -
TIGRFAM 372 470 99 2.3E-18
Phobius 373 394 22 -
TMHMM 373 395 23 -
Phobius 395 912 518 -
SFLD 424 900 477 0.0
SFLD 424 900 477 0.0
SUPERFAMILY 427 890 464 1.6E-32
PRINTS 433 454 22 7.6E-5
PRINTS 440 454 15 3.4E-7
ProSitePatterns 442 448 7 -
SUPERFAMILY 446 708 263 1.16E-17
Pfam 537 619 83 3.0E-9
Gene3D 540 672 133 1.1E-14
Gene3D 692 889 198 4.6E-54
TIGRFAM 820 935 116 1.4E-32
PRINTS 849 868 20 3.4E-7
Pfam 877 1073 197 5.8E-61
Phobius 913 932 20 -
TMHMM 917 939 23 -
PRINTS 926 946 21 7.6E-5
Phobius 933 943 11 -
TMHMM 944 961 18 -
Phobius 944 961 18 -
Phobius 962 989 28 -
TMHMM 990 1012 23 -
Phobius 990 1014 25 -
Phobius 1015 1019 5 -
TMHMM 1017 1039 23 -
Phobius 1020 1039 20 -
Phobius 1040 1045 6 -
Phobius 1046 1068 23 -
TMHMM 1046 1068 23 -
Phobius 1069 1080 12 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Phospholipid transport The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0101000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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