Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0102600 |
| Transcript ID | LotjaGi3g1v0102600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT5G56790.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9FFW5|PERK8_ARATH Proline-rich receptor-like protein kinase PERK8; TrEMBL-Plants: tr|A0A072V466|A0A072V466_MEDTR Tyrosine kinase family protein; Found in the gene: LotjaGi3g1v0102600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12731379..12733993) extracted from Lotus japonicus Gifu genome v1.2.
CAAACATTATATAGCAGTAGAGCATTGTACACTCTCTTTCCCTTTGCTCAAAATTCAGGTCAAACAATAATGTCTCAACA AGAGGTAGTTTGCTCTGTGTGCAATAACAGGAGACCAAAACTAGAATGGAAGAGAGACTTCACATATGCTGAGCTGCATG CAGCCACACAAGGTTTTTCCCTGAAGAACTTTCTGTCAGAAGGTGGGTATGGTTCTGTCTACAAAGGGGTGCTGCATGGA CATAAGATTGCTGTTAAGAAACATGTCCATGCAAGCTACAAAGCAGAGAGGGAATTCAAGTCTGAAGTTGATGCACTCAG CAAAGCAAGACATGAGAATGTGGTCATGCTGCTGGGATCATGCTCAGAAGGAAGCCACAGGCTTCTTGTTTATGAATATG TCTGCAATGGTTCACTGGACCCACATTTATCTCGTATAACACAAATACTGTAAAACTAAACTTTGATAGTAAATACTACT TAAAACATGAATCAGGATCCTTTTATGTGGAAACTCTCTCATGTTCCCTCATATTGAAATTTTGTGTCTATCTCTCGTCA TATGCACTAATGGGACCATTTGAATATTTATGAAAAGAGAGATAGACACAATGTTTCGCTTGATATTGTCATGTGACATA GGAGGATCTTAATCCGTGAAAACAGGAATTCTTGCATCTCCTGATGCTACATTGAAGAGATACTAACTTTGATCACTACC ATAATGCAGAACATTCTCGTAAACCTCTTTGCTGGCAAGACAGGATGAAGATAGCTAATGGAGCTGCCAAAGGATTGCTA TACCTGCACGAGAACAACATCATACACAGGGATATTACAACAAACAACATTCTTCTCACACATGATTATGAAGTATTGGT AATGTTATAATCATTATTTGTAAATAATTATCTTTCTTTTGTCTTTTGTATTGATTGATAGCTTCTATGTGTTTCTAGTT TTCATCATTATACAACCTTAGGACTATAATTAAGTATACCCCTTACACTATTAGCTCAGCAACTAATGTTCTTACATTCC TTCCCCAAAATTTCAACAGGAAATAATGTGAATATAATAATCTGTATATTAGAATTTAAATTTAAAAACATATTACTATA TTGTAACATTAGACTTATATACTATATATTAATTACTACAAGCACAACATATTATTTATGGTCATTTTGGCATTTAAAAG TACTTATAATTCATTGTAACTTGCTTCTACAATCACAGGATCTTTACCTCATCAAGTTCAATAAATAAATCTGTTTATGT TTTTATCAGCTGGGTGATTTTGGTTTGGCTAAAATTGTAACTGAAGATCACTCAAGCTCCATAGACTGTGTTGGGAATCA GGCATATTGGGCACCAGAATATGCAGAATTTGGTAAAGTTTCAATTAAGACAGATGTGTATTCTTTTGGGATGGTTCTAC TACAGCTGATAACTGGGATGAGGACCACAGACAGACGGCTTGGAGAAAAAGGTCTAGTGGGATGGGTAAGAATCTGAATA CACAAAACTTGGTGCATAAAAACTTTGTGTTGCTTCTTTCTTCTTTTTGCATTTGTGATTGCAATTTCTCTTATTACCTT GTTCACTTTAACCAGCATTTTTCATTCTAAAGTTGGAAATAGGATTGAGTTTAATAACTATGCACTGAGAGAGTAAAATT GTTTTACAAAGATGTCAAGAATCTTATTGGATTTAATTTATAATAAATGATAGTGTAAAGATGAAAAGCTAAGACACTTT ACATTGTCCGTGCATATAGATTAAATCCAATAAGATTATCAGAACACCTAATTTAAAAAAATTAATACTGCAAAAAAAAA ATTACCTGGCTGATGTGGGAGCTAGAATTTCCACTTTTTGGTTCCTTATTTTATTCCAGCTTCAAAGTTGTTTTAGCTTG TCATCATCTTTGTGCAGGCCAGATCACAACTAAGAGATGGGGAATGTCAAAGATTTATAGATAGAAGGATGATGAACTCA CATGATTGCCATCAAGTCTTTTGGATGTGTCGTCTAGCTGGAAATTGTCTCAAGAAAGATCCTAATAAGCGATTGGATAT GACAAAAGTAAGCCAATTTGAATAAATTCCTCAATAAGCAATCATAGTAGAAGAAAAACTTAATTAGCAACATATAAAAA CCATTTAGAGTCACATTGTTTATCCTATTACTCATTTTACTTAAGCCAATAAAATTAGAACAATTAGTCAGCAACATATA GCAGAATTTCAGTTTCTTCTTAACTTATTAATGAAACTATATTTTTCATATAATAAAGACCAAATATCTTCTACTCTAAT TTGCTCTTATATATCACATCTAGGTGGTCAAAGCCTTAAGTCATATAGTCGAAGGTTGCAGTTGCTGCATCATGGGGAAA GAGCATACCGTTGCCATGTTAGGCTATTCTAAGTTGAAAGATGATTTACAGGACTATTCAGAATCAGAAACTGAAAGTCA GATTATTGTTAGATCCAACAGTGTAAAATAGAAAGAGAAAGCAATACAAAATGGACTGTGGCTTGCAAAAGCAATAGCTT GACTTGGCTATCAATTGTAAATTCCATACATTGAGCTTTGTGAAAACATAAAGAG
CDS sequence (LotjaGi3g1v0102600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCAACAAGAGGTAGTTTGCTCTGTGTGCAATAACAGGAGACCAAAACTAGAATGGAAGAGAGACTTCACATATGC TGAGCTGCATGCAGCCACACAAGGTTTTTCCCTGAAGAACTTTCTGTCAGAAGGTGGGTATGGTTCTGTCTACAAAGGGG TGCTGCATGGACATAAGATTGCTGTTAAGAAACATGTCCATGCAAGCTACAAAGCAGAGAGGGAATTCAAGTCTGAAGTT GATGCACTCAGCAAAGCAAGACATGAGAATGTGGTCATGCTGCTGGGATCATGCTCAGAAGGAAGCCACAGGCTTCTTGT TTATGAATATGTCTGCAATGGTTCACTGGACCCACATTTATCTCAACATTCTCGTAAACCTCTTTGCTGGCAAGACAGGA TGAAGATAGCTAATGGAGCTGCCAAAGGATTGCTATACCTGCACGAGAACAACATCATACACAGGGATATTACAACAAAC AACATTCTTCTCACACATGATTATGAAGTATTGCTGGGTGATTTTGGTTTGGCTAAAATTGTAACTGAAGATCACTCAAG CTCCATAGACTGTGTTGGGAATCAGGCATATTGGGCACCAGAATATGCAGAATTTGGTAAAGTTTCAATTAAGACAGATG TGTATTCTTTTGGGATGGTTCTACTACAGCTGATAACTGGGATGAGGACCACAGACAGACGGCTTGGAGAAAAAGGTCTA GTGGGATGGGCCAGATCACAACTAAGAGATGGGGAATGTCAAAGATTTATAGATAGAAGGATGATGAACTCACATGATTG CCATCAAGTCTTTTGGATGTGTCGTCTAGCTGGAAATTGTCTCAAGAAAGATCCTAATAAGCGATTGGATATGACAAAAG TGGTCAAAGCCTTAAGTCATATAGTCGAAGGTTGCAGTTGCTGCATCATGGGGAAAGAGCATACCGTTGCCATGTTAGGC TATTCTAAGTTGAAAGATGATTTACAGGACTATTCAGAATCAGAAACTGAAAGTCAGATTATTGTTAGATCCAACAGTGT AAAATAG
Protein sequence (LotjaGi3g1v0102600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSQQEVVCSVCNNRRPKLEWKRDFTYAELHAATQGFSLKNFLSEGGYGSVYKGVLHGHKIAVKKHVHASYKAEREFKSEV DALSKARHENVVMLLGSCSEGSHRLLVYEYVCNGSLDPHLSQHSRKPLCWQDRMKIANGAAKGLLYLHENNIIHRDITTN NILLTHDYEVLLGDFGLAKIVTEDHSSSIDCVGNQAYWAPEYAEFGKVSIKTDVYSFGMVLLQLITGMRTTDRRLGEKGL VGWARSQLRDGECQRFIDRRMMNSHDCHQVFWMCRLAGNCLKKDPNKRLDMTKVVKALSHIVEGCSCCIMGKEHTVAMLG YSKLKDDLQDYSESETESQIIVRSNSVK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 306 | 303 | 3.6E-148 | – | |
| PANTHER | 4 | 306 | 303 | 3.6E-148 | – | |
| Gene3D | 8 | 110 | 103 | 3.8E-30 | – | |
| PIRSF | 10 | 314 | 305 | 2.1E-36 | – | |
| SUPERFAMILY | 19 | 302 | 284 | 5.93E-72 | ||
| ProSiteProfiles | 36 | 303 | 268 | 34.619 | ||
| Pfam | 38 | 298 | 261 | 8.8E-48 | ||
| Gene3D | 111 | 315 | 205 | 4.0E-54 | – | |
| ProSitePatterns | 152 | 164 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0102600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…