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LotjaGi3g1v0102800.1

Overview

Field Value
Gene ID LotjaGi3g1v0102800
Transcript ID LotjaGi3g1v0102800.1
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT5G56790.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9ZUE0|PEK12_ARATH Proline-rich receptor-like protein kinase PERK12; TrEMBL-Plants: tr|K7KYG1|K7KYG1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0102800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:12740456..12743561) extracted from Lotus japonicus Gifu genome v1.2.

GTCCAGGTCTGCATCAAGTGATCAATTGACATCAAAAGGAAAACTAGTGGACTACCAGCACGGAAGCAACAATGAAATAT CTCAAATGCAGGAAGTATTTATAAATCCAGTTTGTTCTTTATGCAAGAATCGGCGACCAAAAATTGGATGGAAGAAAGAC TTCACTTACACAGAACTCTACACTGCTACACAGGGATTTTCTGCCAAGAACTTTCTGTCAGAAGGTGGGTTTGGATCTGT CTATAAGGGACAGCTGAATGGAATGACAATCGCTGTTAAGCAACATAAAAGTGCAAGTTCCCAAGGAGAGAAGGAATTTA AGTCTGAAGTTTATGTACTTAGCAAGGCAAGACATGAGAATGTGGTTATGCTGCTAGGTTCATGCTCAGAAGGAAATAAT AGGCTTCTTGTTTATGAATATGTCTGCAATGGCTCACTTGACCAACATCTATCAGGTAAGCAAACAGGCTTTAACTCAGT GTTTTGTTTCTATTTATATGTTACTTGATAAAGCGTATAAGAAACTAACTTCTTTTAGACTGATGCAGAACACTCTCGAG CACCTCTTACTTGGGAAGATAGGATCAAGGTAGCTATAGGAGCTGCCAAAGGCTTACTATACTTGCACAAGAATAACATA ATCCACAGAGATGTGAGACCAAACAATATCCTAGTAACACATGATCATCAACCAATGGTAATTTATCAACTTTTGAAATA CTACAGAGATACATTGATGATAATATGTGTCTATTCGCATGTATATGATGCCAATTGAAACATGGAATACTAATTCTTAT TTGCAATGATGCATCAGATACTGCTTTGTAAGACATTAGTCATTCGTCAAGACTATGAACAATGTTTATTTGTTGATAAA TGATGGAGTGTTTGATAATTAAAACATAATTATCATTACTTCTTGTACTTTAGAAAATGAGATAGCAAAAGCACATAGTA GTCCTGGAATACTCTGGCTCACTGTCAATTTCAGAAAGAATTTGAACTTCATCAAAACTAACATTTTTCTTTCCTGATGA AATTATTAGTTGGGAGACTTTGGATTAGCAAGAAATCATAATCAAGACATAACACACTCAACAGAAGTTGTTGGAACTTG GGGGTATTTGGCACCGGAATATGCAGAATATGGCAAAGTGTCAACTAGAACAGATGTATATTCGTTTGGGGTGGTACTAC TACAGCTTATAACTGGAATGAGGACTACAGACAAAAGACTAGGAGGAAGAAGTCTTGTGGGATGGGTAACAGTCTAAATA CCATGCAATTTCAATTTGAGTATCTTAATGTCTTAGTATAACTTCAGCGCATCAAGGCATCGATATGCTTCAAATTAATT TATATTCCTAGTTTTCTGTGTTCATGTCAAGATCAGGGGTTACCAACATGCTTAAGCATTTGAGAGGCACTAGTGAATTT TTTTCTTTTTCACCATTCATTAAAGACATTACAAATGATAGTTCATTGTTGGTAATTTGTTGATTTTTCAATTGATCTTT AATTACATTAATGGCATCAACTATAACTATTCTCTTTCACTTTTGACTTTATAATTCAATTGTGGTCAAACTATAATTCA TTCTGATAGGACAGAGGTTCTGACCAATTACCAGGGGTTATGTTACTGCATAGCACAAATTCTAATTGCAACATTTTGAT GAATAAAAATTATTTGTATTTTTCTTAGTTTGTCTATTCAATTTTATTGCAGGCAAGGCCACTTTTAAGAGAGAGGAATT ATCCAGATCTGATTGATGAAAGGATCTTTAACACTAATGATTTCCATCAGCTATTTTGGATGGTCCGAATAGCAGAGAAA TGTCTAAGCAAGGACCCTAAGAAGAGACTAAATATGGCTGCGGTAAGCTTACATTATTCGACCTAACCTTTTGAAGTATA GTTCAATTATACTGTATTTTAATGGAGAGGAACTTGAGACAATGGAGAACAGTTGAAAATTAGCAACATGTCATAACCAT AGCCAAGTGAACAGACATACTTCTTATTAGCTTCTTGTAAATCTATCCACTGTATTCTTCAAAGTTCAAAGGGTGCTAAT ACTCTTTTCTGAACACTCTTTCTAGTATCTGGGAAAATCTCATTTGGATCCCACTAAGAAGCTAGGTTCATTACTTACTA GTGGGGATTTCACACTATAATAAAGTGTGTTTGAAAGTGTATCAAAGAGTATGTTTTAAGCATTTTCCAATCGAAAACCT TCCAACAAACATTATCACTATGAGAAATGTTACCAACACACTCTTAAGAAACAATTTCCAACAACCTCGATTATGGAGCA TGTTGGAGAGAATGTTCAAAAGGAATGCATTAGTAGCATTCCTCTTGTCTCTGGATTTTACAAAAAGGTGGGACAGCTAG CTTAAGCAAATAAACTTTTAAGAGAACAAGGCCTGCATTAGCTTCTCCTAACATGACATTCATCAACTTTATAAAATGCA AGACCAAATTTTGAAGTGATACTTTTTTTTTCTTTCATATCACTACAGGTTGTTAATGCTTTGACTGACATTGAGAAAGG CAACACATGTGATATCCGAGTGAGAGACTACTCACCTGCAAGGTCATATTCATCCTATAGCGAATCAGAAATTGATGAAT CTGAAGATGAAATGCAAGTACTTTTCGAGTGTGAAGCTGAATTACAAAGCAACAGTTCAGAATCCACGACAAGTAATAGC ATAATTCAGATGGAGCATATGCTTGTAAGACAGCCACCATCCCCTCCATTTCAGAGCATCTCTTCAAGTAGCTCAAGCTC AATGAAGATTTATGCGGAACCAACTGGTGATTGTGAAGCACTGGATGAAGAGAATACAGAAATATCAGAATGCCAAGTGG AGTTACTCAATTCTTAGATTAGATTGTACACTATACAACTGAAATAATGGTATATTTCAGTTTTGTTCATTTAGACAAAT AAATTTGTCACTTCAATTATTCGGTTAAAGTGGTTACTTTGTGATAGAATATGGTTTCCCAGTTGTGATGAATTGTAGCT TCTGTTATAAAATGTACTTAATGAACTATTTGATCCTAAATTTAGTTGAGTCTAAATTTGATCCTC
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0102800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCAGGAAGTATTTATAAATCCAGTTTGTTCTTTATGCAAGAATCGGCGACCAAAAATTGGATGGAAGAAAGACTTCAC TTACACAGAACTCTACACTGCTACACAGGGATTTTCTGCCAAGAACTTTCTGTCAGAAGGTGGGTTTGGATCTGTCTATA AGGGACAGCTGAATGGAATGACAATCGCTGTTAAGCAACATAAAAGTGCAAGTTCCCAAGGAGAGAAGGAATTTAAGTCT GAAGTTTATGTACTTAGCAAGGCAAGACATGAGAATGTGGTTATGCTGCTAGGTTCATGCTCAGAAGGAAATAATAGGCT TCTTGTTTATGAATATGTCTGCAATGGCTCACTTGACCAACATCTATCAGAACACTCTCGAGCACCTCTTACTTGGGAAG ATAGGATCAAGGTAGCTATAGGAGCTGCCAAAGGCTTACTATACTTGCACAAGAATAACATAATCCACAGAGATGTGAGA CCAAACAATATCCTAGTAACACATGATCATCAACCAATGTTGGGAGACTTTGGATTAGCAAGAAATCATAATCAAGACAT AACACACTCAACAGAAGTTGTTGGAACTTGGGGGTATTTGGCACCGGAATATGCAGAATATGGCAAAGTGTCAACTAGAA CAGATGTATATTCGTTTGGGGTGGTACTACTACAGCTTATAACTGGAATGAGGACTACAGACAAAAGACTAGGAGGAAGA AGTCTTGTGGGATGGGCAAGGCCACTTTTAAGAGAGAGGAATTATCCAGATCTGATTGATGAAAGGATCTTTAACACTAA TGATTTCCATCAGCTATTTTGGATGGTCCGAATAGCAGAGAAATGTCTAAGCAAGGACCCTAAGAAGAGACTAAATATGG CTGCGGTTGTTAATGCTTTGACTGACATTGAGAAAGGCAACACATGTGATATCCGAGTGAGAGACTACTCACCTGCAAGG TCATATTCATCCTATAGCGAATCAGAAATTGATGAATCTGAAGATGAAATGCAAGTACTTTTCGAGTGTGAAGCTGAATT ACAAAGCAACAGTTCAGAATCCACGACAAGTAATAGCATAATTCAGATGGAGCATATGCTTGTAAGACAGCCACCATCCC CTCCATTTCAGAGCATCTCTTCAAGTAGCTCAAGCTCAATGAAGATTTATGCGGAACCAACTGGTGATTGTGAAGCACTG GATGAAGAGAATACAGAAATATCAGAATGCCAAGTGGAGTTACTCAATTCTTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0102800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MQEVFINPVCSLCKNRRPKIGWKKDFTYTELYTATQGFSAKNFLSEGGFGSVYKGQLNGMTIAVKQHKSASSQGEKEFKS EVYVLSKARHENVVMLLGSCSEGNNRLLVYEYVCNGSLDQHLSEHSRAPLTWEDRIKVAIGAAKGLLYLHKNNIIHRDVR PNNILVTHDHQPMLGDFGLARNHNQDITHSTEVVGTWGYLAPEYAEYGKVSTRTDVYSFGVVLLQLITGMRTTDKRLGGR SLVGWARPLLRERNYPDLIDERIFNTNDFHQLFWMVRIAEKCLSKDPKKRLNMAAVVNALTDIEKGNTCDIRVRDYSPAR SYSSYSESEIDESEDEMQVLFECEAELQSNSSESTTSNSIIQMEHMLVRQPPSPPFQSISSSSSSSMKIYAEPTGDCEAL DEENTEISECQVELLNS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27001:SF722
4 323 320 7.8E-168 –
PANTHER
PTHR27001
4 323 320 7.8E-168 –
Gene3D
G3DSA:3.30.200.20
11 112 102 6.3E-32 –
SUPERFAMILY
SSF56112
22 300 279 1.01E-77
IPR011009
ProSiteProfiles
PS50011
38 303 266 38.775
IPR000719
SMART
SM00219
38 300 263 6.0E-35
IPR020635
Pfam
PF07714
41 300 260 8.5E-50
IPR001245
Gene3D
G3DSA:1.10.510.10
113 319 207 5.4E-59 –
ProSitePatterns
PS00109
154 166 13 -
IPR008266
MobiDBLite
mobidb-lite
370 405 36 - –
MobiDBLite
mobidb-lite
373 390 18 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004713
Molecular function Protein tyrosine kinase activity Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0102800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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