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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0104300 |
| Transcript ID | LotjaGi3g1v0104300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR disease resistance protein; TAIR: AT3G07040.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q39214|RPM1_ARATH Disease resistance protein RPM1; TrEMBL-Plants: tr|A0A0S3SJ28|A0A0S3SJ28_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0104300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12902716..12906627) extracted from Lotus japonicus Gifu genome v1.2.
CAGGAAATTATGAGGATCATGGGAATAACTTCCATTGAAATATTCTCTTCTCACTAAAATTGTATTTATTTTGTTTTTCT TGTCACCTACCACTGACTATTCACGCCTGCCAAGTGCCAACTTTTGTTTTGTTAACGAATCTCAACATGCCAACTTGCTT GCATCTACACTCAAAGAATTAATTGCCAGCACACCCATGAAAGTTTGTCTTTTCTTTTAAATATTTGGATTCGTTAATCA AAATACTTCCACCAACCAAAGTTATACTCCAGCCAAACATGATACTTATAACTCGTTAAAAATATTGGAATAGCAATCTG ACATGATGTGATGAATTGAAATGGCAGAAACAGCAGTATCATTTGTTGTGGACAAGCTTTACCAGCTTGTAATAGAAGAA GGAACTTTGCTTGGAGGGATTAAAAGAGATTTCACAGACATCAAAGATGAACTTGAGAGCATTCAAGCTTTCCTCAAAGA TGCAGATAGAAGAGCTTCCACAGATGAAGCAGGTGCCAGTGAAGGAATCAAAACATGGGTGAAGCAGGTGAGAGAAGTCT CTTTTTGCATAGAAGATGTGATTGATGAGTACATCATGTATGTGGTACCAAGGGTCAACCATTCAGGATGCATAGCCTCA TCACTCCAAAAGATTGCTCACAAAATCAAAACCTTGAAGCCTCGTCATCGAATTGCATCCGATATCCAAGACATCAAGTT ATCAGTTGGTGGAATCAAAGAAAGAAGTGAAAGGTATAACTTTCAGTCTTCAGCTGAAAATGGATCAAGGAGTTCTAGAG GGACTAAAGATGCCAAATTTCGTGACCCTCGAATAGCTTCCCTTTTCATTGAAGATACTGAAGTTGTGGGGTTTGAGTCA CCAAGAGATGAATTGATTGGTTTCTTAGTGGAAGGAATCAAGGAGAGGATGGTGATTTCTGTGGTGGGAATGGGAGGACT TGGCAAAACCACTCTTGCCAAGCATGTTTTTGACAACCAAAAGGTAAGAAAGCATTTTGATTGCTGTTCTTTTATTACAG TCTCTCAATCATACACTGTGAGGGGATTGTTGATAGATATGATACAGAAATTTTGTAAAGACAGTAATGAGCCTAATCCA AAGGGTCTGCATAAGATGGATGAGAGCACACTGGTTTCTGAAGTGAGGCAATACCTTCAGTCAAAGAGGTATTTGGTCCT GTTTGATGATGTTTGGCGAGAAAATTTTTCTGATGAGATTGAGCATGCCTTGCCTAATAATAACAGAGGAAGTAGAATCA TGATCACCACTAGAATGATGCATGTTGCTGAGTTTTTTAAGAAATCATTCCCTGTTCATGTTCACAAACTGCAAGAACTG TCCCCAAACAAAGCATGGGAGCTCTTCTGTAACAAGGCATTTAAATCAGAGCCTGGTGGGAATGCAAATTGTCCAACAGA ACTTGAGGATATGTCCAAGGAATTTGTTAAAAAATGTGGAGGGATGCCACTTGCAATTGTTTCCATTGGTGGTCTTTTAT CAACAAAAGCTAAAACCATGTATGAATGGAGAAAGGTGACTCAAAATATAAGGATAGAGTTAGAGCGAAATCCACATTTG ACTAATTTGACAAGGATTTTATCTCTCAGTTATGATGATCTTCCTCACAATTTGAAAGCATGCATGTTGTATTTTGGCAT ATATCCGGAGGATTACTCCATCAGACGGAAGCGACTCACTAGGCAATGGATGGCTGAAGGGTTTGTTAAAAATGAAGAGA GAAGAACTTTGGAGGATGTTGCTGAAGAGTGCTTGACAGAGTTGATACAGAGAAGTTTAGTTAAAGTGTCCAAATATGGG TTTGATGGAAAAGTCAAAATCTGTTATGTTCATGATTTATTTCGTGATGTGATCGTTAGAAAAATGAAAGATATAGGCTT TTGTCATTTAATGCATGAAGATGATGAACTAGTCACTGTTGGAGTAACTAGACGCTTCTCTATAATAGCTGCATCCAACA ATGTGCTGAGATACACTAACTACTCAGGCATTCGAGCTGTTTTTGTTTTCGACAAAGGTGAAATGCCTAAACATTTTTTG GGTAGATTATCTTCAAAGTTCAAGCTCTTGAAAGTACTTGATTTTGAAAGTGCTTTGATGGATTATGTTCCTGATAATTT GGGGAATCTTTTCCACCTGAGTTACCTAAACCTAAGCCATACCAAAGTGAAGGTTCTACCTAGATCCATTGGTAAGCTCT TGAACTTAGAAACTTTGGATCTCAGACAAACTCTAGTGCATGAGCTACCAAAGGAAATAAACAACCTGACAAAGCTAAGG CTTCTTCCAATTTATTACAGGAAGTACGAAGGACAATATTCTATGTTGAACTTCACAACTGGGGTGCAAATGCAAAAGGG TATTGGATGCTTGAAATCATTGCAAAAGCTTTACTTTCTAGAAGCTGATCACGGTGGAATAGACCTTATCCAAGAGCTCA AAATGTTGAGACAGTTGAGAAAATTAGGCATAAGGCGCGTGCGGAGAGAATATGGGAGTGCCCTTTGTGATGCAATACAA GAGATGAAACATCTTGAATCTCTCAATATCAGTGCTATTGCTGAGGATGAAATCATTGATTTGAATTTCACATCAGCTCC TCCTCATCTTCGAGTGCTCAATTTGAAAGCTGGACTAACAAAGTTGCCTGAATGGATTCCAAAACTTGAGTATCTTGTGA AGCTAAGGCTTGGCTTATCTAACTTAGAATATGATCCACTAGACTCTTTGAAGAACTTGCCAAATCTATTGCGGCTCAAT CTATGGGATAATTCCTTTGCAGGAGAAAGTTTGTATTTTCAAGTTGGAGGATTTCCAAAGCTGAAGGAACTAGATCTCAC TAGATTAAACAGACTGAGTTCTATCTCTATAGATAAAGGAGCTTTGCTTGGTCTTGAACACTTCAGATTTAACAATAACC CAGAGTTAAGGGTGGTACCTGAGGACCTCAAACATTTGATGAACCTTCAATTCCTTGGATTTAATAATATGCCAGCTGAA TTAGTTGAAAGCATTGATCCAGAAAAAGGTGGACAATGCCATTGGATTATCAAGCATATTCCACTTGTACTCATCCGTCA GAGTGTGGGACCAAAATTTCATGACTATGAGTTGCGCCCCATTCCTACATTGGACCATGTCTAAAATATGAAGGTATGTA TACTTTTTCCTCTTACCACATTGTTTTTCTCTTATGAATGTTTGAAATTGCATTGTCACTCTCACAATGTGTATTTGTTA GTTTCACCTTTATAAATCTGTGAATAATGCTTAATTTATTCAGCATTGAGAATTAGAGGCCTAGACATATTTGCTTTTTA TTTATATGATGCTCAAATTCCTGTTTGTATGCTGACAGAAATTCATATTCTCCATATTGCAGCTCACAAGAACGATGCAT TATATCTCTTCATCCCTTCTATGGTGCTTGAATCCCCAAATAAAGATTTCCATGAAGTCATCCTACTTCATCAAGGAATT CCATTCTGAGTTACTCTGGCTTTTTTTACTTTTGTTATTTGTGATGTGTAGTTGTGGCCTTGTGGGAGATTTTTTGCCCT GTACTATAAAATCAAGACCTTCATTTGTAGTTTGTAAGTATATACCTTTATATTGATTTTGCTAAGAAGGATGGAAGCTA TTTCTTAGCGATTAATAAATGGATTTGTTATGCAGATTTAGTTTACCTATTGTTGGTTATTGCTATATACAGAATTACTT AGTACAAAATGAAGACCCTGTTTGGTTTCTCCATTTTATATTTTCATTACAAGAAATGGTAGAAAAAATATGTTTGGTTT GATTTTTAAAATAAAATATTTCCGAGATGTAATCGAGGCTTATTCCGGTCTACATCGATTACGTTTTTTTTT
CDS sequence (LotjaGi3g1v0104300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAAACAGCAGTATCATTTGTTGTGGACAAGCTTTACCAGCTTGTAATAGAAGAAGGAACTTTGCTTGGAGGGAT TAAAAGAGATTTCACAGACATCAAAGATGAACTTGAGAGCATTCAAGCTTTCCTCAAAGATGCAGATAGAAGAGCTTCCA CAGATGAAGCAGGTGCCAGTGAAGGAATCAAAACATGGGTGAAGCAGGTGAGAGAAGTCTCTTTTTGCATAGAAGATGTG ATTGATGAGTACATCATGTATGTGGTACCAAGGGTCAACCATTCAGGATGCATAGCCTCATCACTCCAAAAGATTGCTCA CAAAATCAAAACCTTGAAGCCTCGTCATCGAATTGCATCCGATATCCAAGACATCAAGTTATCAGTTGGTGGAATCAAAG AAAGAAGTGAAAGGTATAACTTTCAGTCTTCAGCTGAAAATGGATCAAGGAGTTCTAGAGGGACTAAAGATGCCAAATTT CGTGACCCTCGAATAGCTTCCCTTTTCATTGAAGATACTGAAGTTGTGGGGTTTGAGTCACCAAGAGATGAATTGATTGG TTTCTTAGTGGAAGGAATCAAGGAGAGGATGGTGATTTCTGTGGTGGGAATGGGAGGACTTGGCAAAACCACTCTTGCCA AGCATGTTTTTGACAACCAAAAGGTAAGAAAGCATTTTGATTGCTGTTCTTTTATTACAGTCTCTCAATCATACACTGTG AGGGGATTGTTGATAGATATGATACAGAAATTTTGTAAAGACAGTAATGAGCCTAATCCAAAGGGTCTGCATAAGATGGA TGAGAGCACACTGGTTTCTGAAGTGAGGCAATACCTTCAGTCAAAGAGGTATTTGGTCCTGTTTGATGATGTTTGGCGAG AAAATTTTTCTGATGAGATTGAGCATGCCTTGCCTAATAATAACAGAGGAAGTAGAATCATGATCACCACTAGAATGATG CATGTTGCTGAGTTTTTTAAGAAATCATTCCCTGTTCATGTTCACAAACTGCAAGAACTGTCCCCAAACAAAGCATGGGA GCTCTTCTGTAACAAGGCATTTAAATCAGAGCCTGGTGGGAATGCAAATTGTCCAACAGAACTTGAGGATATGTCCAAGG AATTTGTTAAAAAATGTGGAGGGATGCCACTTGCAATTGTTTCCATTGGTGGTCTTTTATCAACAAAAGCTAAAACCATG TATGAATGGAGAAAGGTGACTCAAAATATAAGGATAGAGTTAGAGCGAAATCCACATTTGACTAATTTGACAAGGATTTT ATCTCTCAGTTATGATGATCTTCCTCACAATTTGAAAGCATGCATGTTGTATTTTGGCATATATCCGGAGGATTACTCCA TCAGACGGAAGCGACTCACTAGGCAATGGATGGCTGAAGGGTTTGTTAAAAATGAAGAGAGAAGAACTTTGGAGGATGTT GCTGAAGAGTGCTTGACAGAGTTGATACAGAGAAGTTTAGTTAAAGTGTCCAAATATGGGTTTGATGGAAAAGTCAAAAT CTGTTATGTTCATGATTTATTTCGTGATGTGATCGTTAGAAAAATGAAAGATATAGGCTTTTGTCATTTAATGCATGAAG ATGATGAACTAGTCACTGTTGGAGTAACTAGACGCTTCTCTATAATAGCTGCATCCAACAATGTGCTGAGATACACTAAC TACTCAGGCATTCGAGCTGTTTTTGTTTTCGACAAAGGTGAAATGCCTAAACATTTTTTGGGTAGATTATCTTCAAAGTT CAAGCTCTTGAAAGTACTTGATTTTGAAAGTGCTTTGATGGATTATGTTCCTGATAATTTGGGGAATCTTTTCCACCTGA GTTACCTAAACCTAAGCCATACCAAAGTGAAGGTTCTACCTAGATCCATTGGTAAGCTCTTGAACTTAGAAACTTTGGAT CTCAGACAAACTCTAGTGCATGAGCTACCAAAGGAAATAAACAACCTGACAAAGCTAAGGCTTCTTCCAATTTATTACAG GAAGTACGAAGGACAATATTCTATGTTGAACTTCACAACTGGGGTGCAAATGCAAAAGGGTATTGGATGCTTGAAATCAT TGCAAAAGCTTTACTTTCTAGAAGCTGATCACGGTGGAATAGACCTTATCCAAGAGCTCAAAATGTTGAGACAGTTGAGA AAATTAGGCATAAGGCGCGTGCGGAGAGAATATGGGAGTGCCCTTTGTGATGCAATACAAGAGATGAAACATCTTGAATC TCTCAATATCAGTGCTATTGCTGAGGATGAAATCATTGATTTGAATTTCACATCAGCTCCTCCTCATCTTCGAGTGCTCA ATTTGAAAGCTGGACTAACAAAGTTGCCTGAATGGATTCCAAAACTTGAGTATCTTGTGAAGCTAAGGCTTGGCTTATCT AACTTAGAATATGATCCACTAGACTCTTTGAAGAACTTGCCAAATCTATTGCGGCTCAATCTATGGGATAATTCCTTTGC AGGAGAAAGTTTGTATTTTCAAGTTGGAGGATTTCCAAAGCTGAAGGAACTAGATCTCACTAGATTAAACAGACTGAGTT CTATCTCTATAGATAAAGGAGCTTTGCTTGGTCTTGAACACTTCAGATTTAACAATAACCCAGAGTTAAGGGTGGTACCT GAGGACCTCAAACATTTGATGAACCTTCAATTCCTTGGATTTAATAATATGCCAGCTGAATTAGTTGAAAGCATTGATCC AGAAAAAGGTGGACAATGCCATTGGATTATCAAGCATATTCCACTTGTACTCATCCGTCAGAGTGTGGGACCAAAATTTC ATGACTATGAGTTGCGCCCCATTCCTACATTGGACCATGTCTAA
Protein sequence (LotjaGi3g1v0104300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAETAVSFVVDKLYQLVIEEGTLLGGIKRDFTDIKDELESIQAFLKDADRRASTDEAGASEGIKTWVKQVREVSFCIEDV IDEYIMYVVPRVNHSGCIASSLQKIAHKIKTLKPRHRIASDIQDIKLSVGGIKERSERYNFQSSAENGSRSSRGTKDAKF RDPRIASLFIEDTEVVGFESPRDELIGFLVEGIKERMVISVVGMGGLGKTTLAKHVFDNQKVRKHFDCCSFITVSQSYTV RGLLIDMIQKFCKDSNEPNPKGLHKMDESTLVSEVRQYLQSKRYLVLFDDVWRENFSDEIEHALPNNNRGSRIMITTRMM HVAEFFKKSFPVHVHKLQELSPNKAWELFCNKAFKSEPGGNANCPTELEDMSKEFVKKCGGMPLAIVSIGGLLSTKAKTM YEWRKVTQNIRIELERNPHLTNLTRILSLSYDDLPHNLKACMLYFGIYPEDYSIRRKRLTRQWMAEGFVKNEERRTLEDV AEECLTELIQRSLVKVSKYGFDGKVKICYVHDLFRDVIVRKMKDIGFCHLMHEDDELVTVGVTRRFSIIAASNNVLRYTN YSGIRAVFVFDKGEMPKHFLGRLSSKFKLLKVLDFESALMDYVPDNLGNLFHLSYLNLSHTKVKVLPRSIGKLLNLETLD LRQTLVHELPKEINNLTKLRLLPIYYRKYEGQYSMLNFTTGVQMQKGIGCLKSLQKLYFLEADHGGIDLIQELKMLRQLR KLGIRRVRREYGSALCDAIQEMKHLESLNISAIAEDEIIDLNFTSAPPHLRVLNLKAGLTKLPEWIPKLEYLVKLRLGLS NLEYDPLDSLKNLPNLLRLNLWDNSFAGESLYFQVGGFPKLKELDLTRLNRLSSISIDKGALLGLEHFRFNNNPELRVVP EDLKHLMNLQFLGFNNMPAELVESIDPEKGGQCHWIIKHIPLVLIRQSVGPKFHDYELRPIPTLDHV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 2 | 134 | 133 | 1.51046E-35 | ||
| Pfam | 5 | 89 | 85 | 8.5E-23 | ||
| PANTHER | 47 | 855 | 809 | 2.4E-164 | – | |
| PANTHER | 47 | 855 | 809 | 2.4E-164 | – | |
| SUPERFAMILY | 158 | 445 | 288 | 6.21E-69 | ||
| Gene3D | 166 | 331 | 166 | 2.5E-36 | – | |
| Pfam | 181 | 433 | 253 | 1.0E-60 | ||
| PRINTS | 198 | 213 | 16 | 6.5E-18 | – | |
| PRINTS | 278 | 292 | 15 | 6.5E-18 | – | |
| PRINTS | 379 | 393 | 15 | 6.5E-18 | – | |
| SUPERFAMILY | 556 | 901 | 346 | 2.28E-43 | – | |
| Gene3D | 570 | 913 | 344 | 1.7E-48 | ||
| PRINTS | 836 | 852 | 17 | 6.5E-18 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi3g1v0104300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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