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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0104500 |
| Transcript ID | LotjaGi3g1v0104500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR disease resistance protein; TAIR: AT3G07040.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q39214|RPM1_ARATH Disease resistance protein RPM1; TrEMBL-Plants: tr|G7I9Y8|G7I9Y8_MEDTR Disease resistance protein (CC-NBS-LRR class) family protein; Found in the gene: LotjaGi3g1v0104500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12934320..12938708) extracted from Lotus japonicus Gifu genome v1.2.
TCCACACAAATCTTCTTCATCTTTGACTTTCATTCATTGTTTTCTCCTCCCTCACCATCCATCGTAGGCAGTTACTTTCC GTTGTTATCATCGCAAGCCCAGAAAAAAGAAATGGTTAGTTTCATCCCTCTCTTTCCTTGGTTTTTGAATTTTCGTTTTC AGTTGATTCTGTTTTTTGTCAACTGTTTATTGGCTTGTATGTTGCTGATAGAATGGATTTTAATATGAATTTCAGTGATT TTAATCTTGTATAACATTGTTGTGTAGGTATCAGTTTCAGTTAACTAACTGTTTGGTTGATTGGAAGTGCTATGGTATGA TCCACCGCTGTCATTGGACCACTGGATTGTGGTTATTCATAAGCTAATTTGAGAAGCTTATTGAAATAAGCTCAACGTAG GTTATAACCTCGTCTGGAAGAACTTATTTGAGCTTATCTTATAGCATAAGCGCTTAGTTAAGTGTATGGAAGAGCTTATG TAAATAGCTCATGACGTACCTATAAGCTGTTTTCAGCTTATTTTCATAAGCTGTTTTGATGAACTTATGAATAAGAGCTT ATCCTTACCTATAAACTATTTTCAATTTCTCAAATTTCCTTATGAATAAGCGCTTTAATAAGCTGTTTATGCAAACTCAT CCTATATATAGGTATAAGTACTTACTAATAAGCTAATACGAACCGCTTTTGAAGATAAGCTCAAAAAAGCTTATAGGTAG GTCATAAGCTATTTATTTAAGCTTTCACACATACTTCCCCCCCCCCCCCGCCATTATTTATCATCTGATAGACATGGTGC TTTAAATGGATTTCATTGAAATTTTGGCTTCTGGTAGAACTCCATTGCATCTGTTTTTGTTGACCATATGCCTGGTAGAT TGATTGGTAAAATTATTGCAAATTAATTAAACTTTAGTCCATATTCGTTTATTTTCCCTTTTGACAGTAAATTTTCTTCC TCAATCGAGTCTTTGCTAGTATCTTACAATTAAGTGCCTGCTTGATATGCAGAATTAAGGATTTGCAAGCAACCAAGATG AGGTGAATGAAATAAGGATACGAAGCAAATGGCAGAAGCTGCAATTTCGTTTGCTCTGGAGCAAATTTTTCAACTCTTGA AAGAAAAAGGAGCTCTGTTGAAAGGCGTTCACAAAGAATTTGCTGACATAAAAGATGAACTAGAAATCATTTTAGCCTTC CTCAAAGATGCAGATAGGAAGGCTTCAGATGAAGGGAGTTCAAAAGATGGAATAAAAACTTGGGTGAAGCAGCTGAGAGA ATTGTCTTTTCGTATAGAAGATGTCATTGCTGAGTACAATATTTATGTAGCACAAGGGACTCATCATGCTGGATACTCAG CTTTCCTCCAAAAAATTTCTCACACGATCACAACAGTAAAGCCTCTTCATCGGATAGCATCCGAGATTAAGGACATTAAG GAATCAGTTAGAGCACTCAAAGATAGAGGTGAAATGTACAACTGCAAGCCCTCACTTGAACATGGATCAAGAGGTGGCAA ATGGCATGACCCTCGAATGGTTTCCCTTTTCATTGAAGAAGCTGAAGTTGTGGGATTTGACAGCCCAAGGAAGCAATTGG TTGATTGGTTAGTGGACGGATCTGCTGCGCGCACTGTGATTTCAGTGGTTGGAATGGGAGGACTCGGGAAAACCACTCTT ACCAAGAATGTTTTTGACAATCAAAAGGTGAAAGGGCACTTCGATACACGTGCTTTCATCACAGTCTCTCAAACATACAC AGTAGAAGCCTTGTTGCGGGACGTACTAAAACAATTCTATACTGAGACCAATGAGCCGTTTCCTGGAGCCATAAACACCA TGAATACCGTTTCACTTGTAGCTGAAATGAGGAGTTACTTGCAGGAGAAGAGGTATGTAATAGTCTTTGATGATGTATGG AAAGTAGAATTTTGGGATGAGATCCAACTTGCTACACTTGATAACATGGGAAGTAGGATAGTAATCACAACCAGGAACTT GGAGGTTGCAAATTATTGTAAGAAATCATCTCTTGTTCGGGTGCACAAGTTGCAACCCTTGCCTCCAAGTAAAGCATGGG AACTCTTCTGCAAGAAGGCGTTTCAGTTTGATTTCAATGGAAATTGTCCACCAGAGCTAGAAGAGATGTCTAGTGAAATT GCTAAAAAATGTGAGGGGTTACCCCTTGCAATTGTGGCCATTGGGGGTCTTTTGTCAACAAAAGAGAAAACTGTGTTTGA ATGGAAAAGACTATGCCAAAACCTTAGCTTTGAGTTAGGGCGAAATCCCCATTTAACTAGTTTGACAAGAATCTTAGCCC TCAGTTATGATGATTTGCCCCATTATTTGAAATCATGTTTCTTGTATTTTGGTATATATCCGGAGGACTATTCTATCAGA TGCATGAGATTGGTTAGACAATGGATAGCTGAGGGATTTATTACAAATGAGGAGGAAACAACAACATTGGAGGAAGTTGC TGAACGATACTTGACAGAGCTGATCCACAGAAGCTTGGTTCAAGTTGAAGTTGACTACGACGGTAAGGCTTCAAGTTGCC GAGTCCATGATTTGCTATATCAAATGATCGTAGGAAAAGCGAAAGACTTGTGCTTTTGTCGTGTTGTTCTTAAAGATGAT CATCCATCCCCTGATGTGATGACAGCTCGACGCTTGGCCATAGCAACTGATTCTTGTGATGTGCTTGGCAACATTGGACA ATACTCACATATCAGGTCCATTTACATATTTGAAGCTAGTGGGAGGCCAGATGAATTGTTCAGTAAGTTCTTTGTAAAGT CTAAGCTTTTGAAAGTGTTGGATTTGGAAGCTACATCTTTGAATTCTGTTCCTGATGATTTGGGGAATATTTTTCACTTA AGGTACTTGAGCTTAAGGAAAACAAAAGTTAAGTGCATTCCGAAATCCATTGGTAAACTGCTGAACCTAGAGACCTTGGA TCTTAGAAACACACTAGTGCAGGAGTTGCCTAGCCAGATATACAAACTCAAAAAGTTGCGCTATCTTCTAGTTTACTTCA GAAATAGAAGTAATACGATTCATGGTGAAACTGGAGTGCGGTTGAATGGAAGTATCGGAAACTTGACATCTCTACAAAAG CTTTATCATGTGGAGGCAGACCATGGTGGATTGAACCTGATAACAGAGCTGAGAAAGTTGAAGCAATTAAGGAAGTTGGG TTTAAAGAATGTAAGGACAGAGTTCGGAAATGCTTTATGTGACTCAATGCAAGATATGAGTTGTCTTGAGTCTCTTTCTG TGAGTGCCATTACAGAAGACGAAACCATAGATTTGCAGCGTATTTCATCTCTCCATCACCTTCGGAAACTTCACTTCTTT GGTCGCTTAGACAAGTTACCAGACTGGGTCACAAGGCTTCAGTATCTTGTTAGATTGTCAATTCATTTTTCCAAGTTGAA GGATGATCAACTGAAGTCACTTAAAGATCTACCGAATTTATTGCGTCTCTCAATCGCACGCGAAGCATATGTTGGTGAGT CATTGCATTTTGAAGTTGGATTTCAGAAACTGAAGAGACTATATCTTGTAGACTTGAATGAAGTTAGCTCCATTGTTATA GAAAACGGAGCTTTACCTGCTCTTGAACGGCTTCTATTGATGCGCTTGCCTCAACTAAAGGAGATGCCATCGAGCTTTCA CCTACTAAAAAGCCTTGAAACTTTGTATTTGACTGATATGTCACATGAGTTCAACCAAAGCATTGATCCAGATCATGGAC CTAAGTATTGGGTCATCAAACATGTGCAGATGGTATCGATTAGAGAAAAGGTTGGTCCAAATTTTCGCGACTACAACTAT CGCACCATTCATCATCCGAGAGATACATGAATACAAAATTTCAAGGTACTCTTTTCTTCTAACAGCATACTTAAGTTTAT ACTCAGTACTCACCAATGTCTTGTATTGCTCATTTCATGATATGCACGCAATTAGCTTTCCATGTTGAGGGGAGAAATGA TTTTATAAAGTTTAACCGTGTATTCAAACACGCTATTAATGTATCAACTCTTAAATTTTCATGTTGTTCTGTAAATTTGT AGGCTTCTCATTTCTCAACGTGGATGGAACTAGGAATGTTGTGCACAACACGACCATTTTGAAGTAAACTATTGGGGTCA TACTGCCTCAATACAAATGAACCTCATGAATTTCTTTGATAGTTATTAATGTTTTCAGGGGCATTTTCTATTCCTGTCAC TGTTGTGTGCGTCTTTTATTTTTCAATGAAGTGACTATGTTGATGCAATTTTGTTCATTTTCTTATGATGTTTAGGTCAT TTCCTAGTTTGCATTGTATATTGAACTATCTATCAGAAATAATACCATGGGAGATGATAAATGTCACAA
CDS sequence (LotjaGi3g1v0104500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAAGCTGCAATTTCGTTTGCTCTGGAGCAAATTTTTCAACTCTTGAAAGAAAAAGGAGCTCTGTTGAAAGGCGT TCACAAAGAATTTGCTGACATAAAAGATGAACTAGAAATCATTTTAGCCTTCCTCAAAGATGCAGATAGGAAGGCTTCAG ATGAAGGGAGTTCAAAAGATGGAATAAAAACTTGGGTGAAGCAGCTGAGAGAATTGTCTTTTCGTATAGAAGATGTCATT GCTGAGTACAATATTTATGTAGCACAAGGGACTCATCATGCTGGATACTCAGCTTTCCTCCAAAAAATTTCTCACACGAT CACAACAGTAAAGCCTCTTCATCGGATAGCATCCGAGATTAAGGACATTAAGGAATCAGTTAGAGCACTCAAAGATAGAG GTGAAATGTACAACTGCAAGCCCTCACTTGAACATGGATCAAGAGGTGGCAAATGGCATGACCCTCGAATGGTTTCCCTT TTCATTGAAGAAGCTGAAGTTGTGGGATTTGACAGCCCAAGGAAGCAATTGGTTGATTGGTTAGTGGACGGATCTGCTGC GCGCACTGTGATTTCAGTGGTTGGAATGGGAGGACTCGGGAAAACCACTCTTACCAAGAATGTTTTTGACAATCAAAAGG TGAAAGGGCACTTCGATACACGTGCTTTCATCACAGTCTCTCAAACATACACAGTAGAAGCCTTGTTGCGGGACGTACTA AAACAATTCTATACTGAGACCAATGAGCCGTTTCCTGGAGCCATAAACACCATGAATACCGTTTCACTTGTAGCTGAAAT GAGGAGTTACTTGCAGGAGAAGAGGTATGTAATAGTCTTTGATGATGTATGGAAAGTAGAATTTTGGGATGAGATCCAAC TTGCTACACTTGATAACATGGGAAGTAGGATAGTAATCACAACCAGGAACTTGGAGGTTGCAAATTATTGTAAGAAATCA TCTCTTGTTCGGGTGCACAAGTTGCAACCCTTGCCTCCAAGTAAAGCATGGGAACTCTTCTGCAAGAAGGCGTTTCAGTT TGATTTCAATGGAAATTGTCCACCAGAGCTAGAAGAGATGTCTAGTGAAATTGCTAAAAAATGTGAGGGGTTACCCCTTG CAATTGTGGCCATTGGGGGTCTTTTGTCAACAAAAGAGAAAACTGTGTTTGAATGGAAAAGACTATGCCAAAACCTTAGC TTTGAGTTAGGGCGAAATCCCCATTTAACTAGTTTGACAAGAATCTTAGCCCTCAGTTATGATGATTTGCCCCATTATTT GAAATCATGTTTCTTGTATTTTGGTATATATCCGGAGGACTATTCTATCAGATGCATGAGATTGGTTAGACAATGGATAG CTGAGGGATTTATTACAAATGAGGAGGAAACAACAACATTGGAGGAAGTTGCTGAACGATACTTGACAGAGCTGATCCAC AGAAGCTTGGTTCAAGTTGAAGTTGACTACGACGGTAAGGCTTCAAGTTGCCGAGTCCATGATTTGCTATATCAAATGAT CGTAGGAAAAGCGAAAGACTTGTGCTTTTGTCGTGTTGTTCTTAAAGATGATCATCCATCCCCTGATGTGATGACAGCTC GACGCTTGGCCATAGCAACTGATTCTTGTGATGTGCTTGGCAACATTGGACAATACTCACATATCAGGTCCATTTACATA TTTGAAGCTAGTGGGAGGCCAGATGAATTGTTCAGTAAGTTCTTTGTAAAGTCTAAGCTTTTGAAAGTGTTGGATTTGGA AGCTACATCTTTGAATTCTGTTCCTGATGATTTGGGGAATATTTTTCACTTAAGGTACTTGAGCTTAAGGAAAACAAAAG TTAAGTGCATTCCGAAATCCATTGGTAAACTGCTGAACCTAGAGACCTTGGATCTTAGAAACACACTAGTGCAGGAGTTG CCTAGCCAGATATACAAACTCAAAAAGTTGCGCTATCTTCTAGTTTACTTCAGAAATAGAAGTAATACGATTCATGGTGA AACTGGAGTGCGGTTGAATGGAAGTATCGGAAACTTGACATCTCTACAAAAGCTTTATCATGTGGAGGCAGACCATGGTG GATTGAACCTGATAACAGAGCTGAGAAAGTTGAAGCAATTAAGGAAGTTGGGTTTAAAGAATGTAAGGACAGAGTTCGGA AATGCTTTATGTGACTCAATGCAAGATATGAGTTGTCTTGAGTCTCTTTCTGTGAGTGCCATTACAGAAGACGAAACCAT AGATTTGCAGCGTATTTCATCTCTCCATCACCTTCGGAAACTTCACTTCTTTGGTCGCTTAGACAAGTTACCAGACTGGG TCACAAGGCTTCAGTATCTTGTTAGATTGTCAATTCATTTTTCCAAGTTGAAGGATGATCAACTGAAGTCACTTAAAGAT CTACCGAATTTATTGCGTCTCTCAATCGCACGCGAAGCATATGTTGGTGAGTCATTGCATTTTGAAGTTGGATTTCAGAA ACTGAAGAGACTATATCTTGTAGACTTGAATGAAGTTAGCTCCATTGTTATAGAAAACGGAGCTTTACCTGCTCTTGAAC GGCTTCTATTGATGCGCTTGCCTCAACTAAAGGAGATGCCATCGAGCTTTCACCTACTAAAAAGCCTTGAAACTTTGTAT TTGACTGATATGTCACATGAGTTCAACCAAAGCATTGATCCAGATCATGGACCTAAGTATTGGGTCATCAAACATGTGCA GATGGTATCGATTAGAGAAAAGGTTGGTCCAAATTTTCGCGACTACAACTATCGCACCATTCATCATCCGAGAGATACAT GA
Protein sequence (LotjaGi3g1v0104500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEAAISFALEQIFQLLKEKGALLKGVHKEFADIKDELEIILAFLKDADRKASDEGSSKDGIKTWVKQLRELSFRIEDVI AEYNIYVAQGTHHAGYSAFLQKISHTITTVKPLHRIASEIKDIKESVRALKDRGEMYNCKPSLEHGSRGGKWHDPRMVSL FIEEAEVVGFDSPRKQLVDWLVDGSAARTVISVVGMGGLGKTTLTKNVFDNQKVKGHFDTRAFITVSQTYTVEALLRDVL KQFYTETNEPFPGAINTMNTVSLVAEMRSYLQEKRYVIVFDDVWKVEFWDEIQLATLDNMGSRIVITTRNLEVANYCKKS SLVRVHKLQPLPPSKAWELFCKKAFQFDFNGNCPPELEEMSSEIAKKCEGLPLAIVAIGGLLSTKEKTVFEWKRLCQNLS FELGRNPHLTSLTRILALSYDDLPHYLKSCFLYFGIYPEDYSIRCMRLVRQWIAEGFITNEEETTTLEEVAERYLTELIH RSLVQVEVDYDGKASSCRVHDLLYQMIVGKAKDLCFCRVVLKDDHPSPDVMTARRLAIATDSCDVLGNIGQYSHIRSIYI FEASGRPDELFSKFFVKSKLLKVLDLEATSLNSVPDDLGNIFHLRYLSLRKTKVKCIPKSIGKLLNLETLDLRNTLVQEL PSQIYKLKKLRYLLVYFRNRSNTIHGETGVRLNGSIGNLTSLQKLYHVEADHGGLNLITELRKLKQLRKLGLKNVRTEFG NALCDSMQDMSCLESLSVSAITEDETIDLQRISSLHHLRKLHFFGRLDKLPDWVTRLQYLVRLSIHFSKLKDDQLKSLKD LPNLLRLSIAREAYVGESLHFEVGFQKLKRLYLVDLNEVSSIVIENGALPALERLLLMRLPQLKEMPSSFHLLKSLETLY LTDMSHEFNQSIDPDHGPKYWVIKHVQMVSIREKVGPNFRDYNYRTIHHPRDT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 2 | 132 | 131 | 1.29408E-29 | ||
| Pfam | 5 | 91 | 87 | 1.5E-20 | ||
| PANTHER | 35 | 867 | 833 | 3.9E-170 | – | |
| PANTHER | 35 | 867 | 833 | 3.9E-170 | – | |
| Coils | 113 | 133 | 21 | - | – | |
| SUPERFAMILY | 153 | 434 | 282 | 4.59E-71 | ||
| Gene3D | 156 | 324 | 169 | 1.1E-36 | – | |
| Pfam | 175 | 422 | 248 | 2.2E-59 | ||
| PRINTS | 190 | 205 | 16 | 1.1E-17 | – | |
| PRINTS | 270 | 284 | 15 | 1.1E-17 | – | |
| Gene3D | 348 | 423 | 76 | 1.7E-6 | – | |
| PRINTS | 368 | 382 | 15 | 1.1E-17 | – | |
| SUPERFAMILY | 498 | 888 | 391 | 1.14E-42 | – | |
| Gene3D | 549 | 900 | 352 | 6.5E-44 | ||
| PRINTS | 826 | 842 | 17 | 1.1E-17 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi3g1v0104500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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