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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0105200 |
| Transcript ID | LotjaGi3g1v0105200.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7KYE4|K7KYE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0105200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13059543..13067551) extracted from Lotus japonicus Gifu genome v1.2.
CTTTGTTAATAGCCATGTTGCTTGATTTTGGGAAGAACATACAGAGGAAACGTACATCTAGGACATTTGTGAGAGCTAGT TAAAATGTAATGAAAAAAATTCAATATATAGCAAAACATTTTATATATGTACCTTTTTTTCAATATCTCTTTTTTGCTCT CACATCAATTACTTCATTTCTGAAAGTGGTGCTTTAAGCTCCTTAAGCATATCAATCTGGTGCATATTTTTCTACAACCA TCAAGTTTGGTTCTGCTGTAACATGATGCAGCGTGGATGGAGTTATGATGTGTTTCTGAGTTTCAGAGGTGAAGACACCA GGAGAACCTTCACAGGCTCTCTTTATCATGGTTTGCGCCAAAGGGGTATCAATGTTTTCATAGATGATGAGGAGCTTAGG AGAGGAGAAGAGATATCCCTAGCTCTTCTTCAAGCAATTGAAGAATCCAGAATTTCCATCATTGTGTTTTCTGAAAACTA TGCAAATTCCAAATGGTGCCTTGACGAGCTTGTTAAGATCCTTGAGTGTTGGAAAACAAAGGGGCAATTGGTTTGGCCAG TTTTCTACCATGTTGACCCTTCCTCGGTACGGCATCAGAGAGAAAGTTTTGGTACTGCAATGGCTGAACATGAAGTCAGG TTCAAGGCTGATTTGGGAAAGTTGCAAAAGTGGAAAGAAGCTTTGTTTGATGCAGCCAATTTGTCAGGTTGGAGCTTAAA TAATGGGTATGTAGCTTGGTATCTATTTCCTTACATGTTTTACCTTTTGTTCATGCAACACCTTTTCTTTTTAGTGTTGA GAAGTCTCATTTTGACTAGAAATATATATAGCCAAAATAGTCCAGGGTAGAACAACTCTCACCATAGCATTTAGGTAGAG TTAGGCTTACCAAATCTAAGATGGTATAAGAGTCTATCCTAGATCCGGTTATCGGAGACCACCCATGTAATGAGCCCCTC GCATTTGTTAATTTATGCAAATTCGTCGCTCAAGATGTCCAGCCCTGACATGAGACGTATGTTGAGAAGTCTAATATTAA CTAGAGATATGATCAAAATAATCTTCATAAAAGGTAAAACAACCTCACCCCTAAGCTAGTTTTTAGGGTAAAGTTAGGCT AATCCAAATTCCAAGATTTGATTACATCAAGGCTCAGTAATAATCAAATAGCCATTAAACCAATTTACATGACATAAGTA TCTACATTATCAACATTGATACCTGCATAGCTATGACTTTGCAGGTATGAATTTGAGCTTATCCAAAGGATCATTGAAGA GGTCTCTAACAAATTAAATCACACCCTTTTGCATATTGCTGAATACCCAATTGGACTAGAGACTCGCATATCAGAAGTGA AGTCACTTTTGCACATTGAACCTGGTGAAGATATTCTTGTCATTGGAATCCATGGACTTGGAGGAATTGGCAAAACAACA ACAGCAAGGGCTTTATACAACTCCATTGCTGATGAGTTTGAAGTTGCAAGTTTCCTTGCTGATATAAGAGAAACTTCAGA CCAACGCCAAGGCTTGGTGCAACTTCAAGAAGCACTTCTTTTTGATACTGTCGGGGACAAGAACATTAAGCTGGGGTATG TTTATAAAGGAATCCCCATTATAAAGAAAAGGTTATGTCGCAAGAAAGTGCTTTTGATTCTTGATGATGTTGACAAATTG GAGCAGCTGCAAGCATTGGCCGGAGGGCGTGATTGGTTTGGTCTTGGCAGTGTGATAATCATAACAACAAGAGATAAGCA CTTGCTAGCTGCTCATCAAGTTGACAAAACATATGAAATAAAGAAACTAAACCATGCTGAAGCTTTTGAGCTTTTTACAT GGAATGCTTTCAAAAGGACAGCACCTGATGAGGGCTACATGGAGATTTCAAACCGGGTGGTGCTCTATGCTGAGGGACAT CCATTGGCTTTGAAAGTAATGGGGTGTAATTTGTTTGGTAAAACAGTGGAACAATGGAAATCTGCTCTGGACAAATATGA AAAAATTCCCAATAAAGAGGTTCAGAGTGTGCTTAGAGTAACCTATGATAATCTAGAAGAGAATGAGAAGGAAATTTTCT TGGATATTGCATGTTTCTTCAAGGGGGAGACAATGGAATATGTTGAAAAGACACTGCAAGCTTGTGGTTTCTATCCAAAA TTTGGTGTTAGTGTACTTATTGATAGATCTCTTGTAAGTGTTGATGAATATAGCAGATTGAGAATGCATGATCTGATACA AGACATGGGTAGAGAAATTGTTAGAGAAGATTCCCCATTAGAGCCTGGAAAGCGGAGTAGACTATGGTATCATGAAGATG TTTTTGAAGTACTCACTGAAAATACGGTAAGATCCATGTGTGTGTTGTGTATGTTATTCAACTATTTGTGCATGTTTGGG AAATCTTTTATAATTGATTCTAAAACCAGAGTCAATTGTGAGAAGAAGCTTTTGGGTCTTAGAATTGATTCTGATGACAG AGTAGCTGATCCAAACATGCTATTTATTTGATTTGTTAACGTTTTCAGCAGAATTTTAATATACTAGTATTAAATTATAG GCTGCCTAAATTCTAACTTAATGTAGTTTACTTATGCTTTGGTTTAAAAGGGGACTTATAAAATTCAAGGCATGATGGTG GACCTCCCTGATCAATATATGGTACACTTGGAAGGTGATTCCTTCAAAAGGATGAAAAATCTAAAAATTCTTATCGTTCG AAATGGACACTTTTATGGAAGCCCCCAACATCTTCCAAACAATTTAAGGTTGCTTGACTGGATGGAATATCCTTCATCAT CTTTACCATCAAGTTTTCTTCCAAAGAAACTAGTAGTACTCAACTTGTCTCGTAGTCGTTTCACAATGCAGGAGCCATTC AAGGTAAGGTTTCATTTTATCATTTCATTTTTTATTCTTCTTAAGCAATGTCTCCGGTTTGAGTCTTGTTTATGAAAAGA AAACCCACTGAGAGAGTGTCCCGCCAGGATATAAATGTTATCCACTCGAACCTGATTTCTACCTGTATTAGACCGAAAAT ATTTCATGTGTTTCTTACTTTCTTTGTCTTCACATAACTTGTAGTTATGCTTATCCAATTTTTCATTTTTTCTCTGCAGT ATTTGGATTCTTTGACCTCGATGGATTTGAGTCACTGTGAGTTCTTAACAAAGCTACCTGACATTTCTGGTGTCCCAAAT TTAACAGAACTGAATCTTGACTTTTGTACAAATTTAGCAGAAGTTCATGATTCTGTTGGATTCCTAGACAAACTTGTTGA GTTGAGGGCTTATGGATGCACCAAACTTGAGGTTTTCCCAAGTTCCATCAGGTTGACATCACTGAGAAGTCTTATTCTTA ATTGGTGCTCAAGTCTTCAAAGTTTCCCAACAATTTTGGGAAAAATGGACAATCTCATATCCGTTTCTATTGAAGGTACT GGTATAAAAGAATTGCCTCCTTCCATTGGAAATCTTGTTGGGCTTGAAGAATTAAGCATGACATCTTGCTCAAGTCTCAA GGAACTTCCTGACAACATTGATATGTTACAAAATCTTAGAAACCTTGACATTGAAGGCTGTCCAAGTTTTTTGACAAAAT TGAGAGAATTGGGACACTCTACCCTTACCTTTGGTAACATTCAGTCTCTGAATCTAGAAAACTGTGGCCTTATAGATGAG GATCTTCCCATAATTTTCAGTTGTTTCCCAAAGTTAGCATCATTAGTTCTTTCAGGAAATAATTTTACAGCTCTTCCAAG CTGCATGGCAGAATTTCCTGGCTTGGAATTACTTCACTTGGACAACTGCAAACAACTCCAAGAAATTCCAGGCATTCCTC CCAATTTACAATACATTAATGCAAGAAACTGCATATCATTGACAGCAGAGTCATCAAATTTGTTACTAAGCCAGGTTTGC CTCTTTTTTAAATCCTCCTACGTTGTAATTTCTTTCTATCTTACCCATATACCCTCTACTAGACACGATCCTGTTCGAGC CATGGACATCTACATCCTTGTGGAGCTTGTATTGTGTTTTTGTTACCATTATTATTAACTTGATTTTTCTTTTTACAGGA AATGTTTGAGGCATGTCAGTTACAAGTTATGGTCCCTGGAACACGAATTCCAGAATGGTTTGATCACATCACCAAAGGAG AATATATGACCTTTTGGGTAGGCCAAAATTTTCCAGCACTGATAATATGCTTTGTTCTTGCAATAGAGAGTGAAATGAAG AAGAGCTTCAATTGCGAAATCCGCTTTTATATAAACAGTGAAGAAGTTTATGAGTTGGAAATGCCAAGATGCTTTTCAGG AATGGTGACAGATCATGTATGGGTGTATGACTTAAGAACTCATCCATCCATCCAGAGGCATCATCTTGATTCATATTTAG TGGAAGGTTGGAATCAGGTGGAGATTTCATGTGAGAAAATAAGTGGAGCATCAAATGTGACTGTGAGCTTGTGTGGAGTT CATGTGTGTAAGGATGAAGCTAACATGAAGGATATCCTATTTAAAGATCCTGATCCTGATTCAGACTTAAGCAGAGACTC TGAGGAGATCAGTACTGATTTGGTCACAACCAATGAAGAAAGCACAAAGTCAATTGAAGATTTCCAATACTGCAAGAGAT TAGATGATAGCTGCCATAATAATTTCAATAATTTGGAAGTTTGGTGTGAGACACAGGATAGTGTTGCTGAAGATTCAATT GCTTCAGTAGTCAGTTCAGAGTGTCCGGGGGGCACAGATAGTGTCAAAGGTAAGCATATAGATATGCATTACTTTCATTC TCCACTATTCATGTTATCTTCATATCATATATGTTTCCATTCATTTTGCTGGTTTGTTGATCAGGCTTTATTTCATATCT GCAAAAGATTGACAAAACATGCAATGCGTAATAACTTGTAAGAGAGTCACTTTTACTATTGCAAATAAGTGACAAATAGA AAAAGGAAAATGATTCGTAGAAATCCACATGGTGCAAACATCCAACAAACACCCAAAGTGAGTAAGGAAGGGAAGAGAGA GAAGTAATGAATGTGATAAGAAGAGAGAGATAGAGAGAAATGAGGTGTCTATTGGGTGTATGCACTATTTGCCTATCTAA GTGTCATTACTGATAGAAAAAAAGAAGGTTGATAATCTAACAAAAATTAGGGTAGCAACTACTTGGTACATATTTTAGCA AGGATTAATTCCATAGGTTACTTGAATTTCCATCCTGCATACTATCCATGTTGTTAGAGATATTATAGAAATTAATTCCA TTTGGCAAAACACATCATTGGCCTGTTAAAATGCTCCAATTAGCTCTTTACCAATTCCTTTAAATTTCACTTGTTATTTG TAGAGTGTGGATCCAACTTTGTACCTACTAATCATCCAGCTAAAGCTCAACCAAAACCCCAAGTCACAAGTTTTATACAA ACGCCAAGTGTCAAGGAATCAAATACTGCTATTGACATTTTAACAACCAGTTTAACAATAGATGATTTGGACATGGAGGC ATTTTATGCTAATCTGGATGCTGAGACCACAGTTCCTTCACCTCTCAATGACACCAGAATGGTTCCGGAATTGTCCAACA GAATGCCACCAAGTGAAGAGACCCAGGAAGCATTGAAGACACTTCAAGACTTTCTCACCAAAGACCTTTCTGTTCTGTTG GAACCTCATCAGCACACTACCATGAAAGCTACCTTAGACTATCTCACCAATTTACCAGCACAAGAAGGAATACCAGTGGA CACAAGGTCACTGATAATAGAGGTTTCAAGACAGTTCACTTGTTGGAGTTTGGATTACACAGAAGAAAGTAGGAAAATAG AGTCTACAACAGCCAAATTGCTGAAAGCTGATGAACTTAAAGAAGGTCTTGAAGCTAACAAGAACTGTTTCAGGGAAGTC ATGTACTTGGAAAATGAGTTGTGCAATGAGTTGGCCTATTTGGAGGAAAGAAAGAAGGAGCTAGAAGAACTGATAAATAC TGTCAAAGCTAACATCTCTGCTTCACAAGAGGCCAGGAACATGGCTGTTCATACAAAGAGAGAAATCTTTGGGGAAGCAA GGATTTTAAAAGCTCAAAGAGATGAGTTAGGGGAACATGTACCAGGATTGAGAAAGTTTGTATCTTGAGAAATGACGTTT TTAGTCCACTACCGTTACATCTGCTAGGGTTTTGGGCTTCGATCGTCCTCATCATTCTCTATACGTGAACAACTTGGCAT CGACTGCTTCTTCTACAACACTTCCCAAAAAGCAGTGGAGGAAACTTTGGAAGTTGGATACTTTTCGAGGTTAAAAGAAA CAGTGTGGATGACTTGTCTTGAGCTTATTTCAGTGCGTGCTTTTCTTGATTGTCGTGGTATTGATCTGAACCATTATTGT CCTTGGTGTGCTTCAGAGCTTGAAACTGTTCAACACACTTTGTTGTTCTATAATGTAATTAAACAATCATTGTTTACTTC CTCGTTGAATTTGCATTTCGAAAACGATTTTTTTGTTTTAAGTTTTTTCAAAGGAATTCATTGCGTAATACCTAGACAGA TCTTCATAGCATTGGTTATTTTATTGCTTTGTTGTATTCTATTTGGCAGGCTAGGAATTGTTTTCTCTTCCATAAGGACT TGATCAGTTTATGGATTCTACGCTCCAACGTGCTACTTCGTTGCGTCCTTTTCTCGTGGCATCGCAGACAACCACTTTTC CTCATTCTCCAGCGATTCGAGGGCTTTGTTGGCGTCTTTGCTGGGGAGTTTACAAGCTCAACTTTGACACATTTGTTTCA AAGGTGAGCTTGCCATATTTTCGGTGTGTTGTTCGTGATTTTAACAACGATGTGTTGGCAACTGTGACTTCACCTGCAAC TAATGTCCTTTCACTAGCCATTACTAAAGATCTTTTGTTCAGATTGTCCTTTGCATTGGTTTCAGAACTTGTCTAAAATT ACATATAGGTGGTAGGGGCCGCGTTATTGATGTGAAATGGCTCCACAAAAAGGGGGGTCTTTGGTTTTATCAACTTTGCT GTGAGACAGATTATCTCCAACTTTTTGAGGCTTGAAAATGTCGCTCTAGTAGTAGTTTTTATTTTGCCTCGGTCGTTCGG GAGTGTAATTTAACTCCAAACTTTGATGTTGTTTTTTATTGGTTTAATATATAGTTTCAAGTTAAATTTGCATTACATAG CAATATAGTTCACTTTTATTTTTTGTACCAATTATTAGGGTAAAAATCCCTTACAGGGAGGAACATTTTAAGAAGAAAAT AATTTTATCTTAAACCTAATAGATAAAATTAGTAGGAAATTTTTTGGCAAATATTTGTTTTAGTATACCAATTTTATTAT GAATCATTGTATTGATACACGCATAAATAATAAGAGCAGGATGCGTCGTGCAATGTACGGGTAAGAACACTAAATGAAAT GTTGTGAACCAAAAAGTATTTGACATCTGAGTGGTTAGTTTAGTTCTTTCATTAACTTAATGTGAATTATAAACATGATT TGGGTATATATGATTTAACTTTGATAGGTTGTTAACAGAATGGTTCTTATCTAAAGCAAATTGTTGGCCAAGTTATGTGA AATATTTGTAGTTGGTATAAGGTACGTTTTATTTTCTGTTATATAAAATAGGCTAATTTTTTTTTTGGCCCCTGATGTTT TAAGTTTGTGCAAATTCTGCCCCTACTTTATTTTTGTTGACGTTTTTACCCCTCATGTTTTCAAACAGTGCACCGTCTAC CCCCCGTCAGTCAGGCTTTCTCAGGAGAGGTTCCTGAGTGGATTAGAGAGATGAAGAGGAGTATATGAAGTTGAAGATGA TCAAGGAAATGATATAAATTAAATTTGCTTCATGTATATATGTTTTATGTATGTAACAGAACTGGTTAAATGCATGTTTT GCTACTTACAGGTCTTGAGTTTGAATCTCCCATGCCCCCTTTTTCCAATTTCACTTGTAATTTCCACGTGGTAGGTCCAA AAAATATTT
CDS sequence (LotjaGi3g1v0105200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGCAGCGTGGATGGAGTTATGATGTGTTTCTGAGTTTCAGAGGTGAAGACACCAGGAGAACCTTCACAGGCTCTCT TTATCATGGTTTGCGCCAAAGGGGTATCAATGTTTTCATAGATGATGAGGAGCTTAGGAGAGGAGAAGAGATATCCCTAG CTCTTCTTCAAGCAATTGAAGAATCCAGAATTTCCATCATTGTGTTTTCTGAAAACTATGCAAATTCCAAATGGTGCCTT GACGAGCTTGTTAAGATCCTTGAGTGTTGGAAAACAAAGGGGCAATTGGTTTGGCCAGTTTTCTACCATGTTGACCCTTC CTCGGTACGGCATCAGAGAGAAAGTTTTGGTACTGCAATGGCTGAACATGAAGTCAGGTTCAAGGCTGATTTGGGAAAGT TGCAAAAGTGGAAAGAAGCTTTGTTTGATGCAGCCAATTTGTCAGGTTGGAGCTTAAATAATGGGTATGTAGCTTGGTAT CTATTTCCTTACATGTTTTACCTTTTGTTCATGCAACACCTTTTCTTTTTAGTGTTGAGAAGTCTCATTTTGACTAGAAA TATATATAGCCAAAATAGTCCAGGGTAG
Protein sequence (LotjaGi3g1v0105200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMQRGWSYDVFLSFRGEDTRRTFTGSLYHGLRQRGINVFIDDEELRRGEEISLALLQAIEESRISIIVFSENYANSKWCL DELVKILECWKTKGQLVWPVFYHVDPSSVRHQRESFGTAMAEHEVRFKADLGKLQKWKEALFDAANLSGWSLNNGYVAWY LFPYMFYLLFMQHLFFLVLRSLILTRNIYSQNSPG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 156 | 156 | - | – | |
| Gene3D | 2 | 160 | 159 | 7.5E-67 | ||
| SUPERFAMILY | 3 | 150 | 148 | 7.59E-44 | ||
| PANTHER | 5 | 155 | 151 | 9.5E-79 | – | |
| PANTHER | 5 | 155 | 151 | 9.5E-79 | – | |
| ProSiteProfiles | 6 | 147 | 142 | 30.533 | ||
| SMART | 7 | 147 | 141 | 1.3E-49 | ||
| Pfam | 8 | 143 | 136 | 7.2E-45 | ||
| TMHMM | 157 | 179 | 23 | - | – | |
| Phobius | 157 | 179 | 23 | - | – | |
| Phobius | 180 | 195 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi3g1v0105200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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