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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0108600 |
| Transcript ID | LotjaGi3g1v0108600.8 |
| Related isoforms 8 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | E3 ubiquitin-protein ligase KEG; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp|Q9FY48|KEG_ARATH E3 ubiquitin-protein ligase KEG; TrEMBL-Plants: tr|A0A0B2QMC9|A0A0B2QMC9_GLYSO E3 ubiquitin-protein ligase KEG; Found in the gene: LotjaGi3g1v0108600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13401963..13405194) extracted from Lotus japonicus Gifu genome v1.2.
ATTCTTCTCAAGTTTTTTATTTTAATTTGTACAAAAAACAGGATGATGATGTACAAACAACCTATGACTTGGTTATTACA TTCTGTTTTGTGCATTTTGCTGGGCATGCCTGCAATACTTGAGGATTTTTCATTTGCCTATGGTTTTGATGACTTTTTCT ATTTTAGGTTTGGTTGGCGTGGGCAGTCACGTGATAGCATTGGGACAGTATTATGTGTTGACGATGATGGAATCCTCCGT GTTGGATTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCAGCTGAGATGGAACGGGTTGAGGAATTCAAGGTTGGAGA CTGGGTTCGTATTCGTCCAACTCTTACATCTGCAAAGCATGGACTAGGATCTGTGACACCAGGAAGCATTGGCATTGTAT ATTGTATCCGACCAGACAGTAGTCTGTTAATAGAACTGAGCTATCTTCCAAATCCATGGCATTGTGAACCGGAGGAGGTT GAGCATGTTGCTCCGTTTAGGGTAAAAAGCATGCTTGATTATTTTCATTCTCTGACTTAGTAGTTTATTTTTCTCCTATC TTCATTACATGTCTTACAATAATGAAAGTTGTCTTACAGATTGGTGATCGGGTATGTGTGAAGCGATCTGTTGCAGAACC TAGATATGCCTGGGGTGGTGAGACGCATCATAGTGTTGGAAGAATAAGTGAGATTGAGAATGATGGTCTCTTAATAATCG AAATACCTAATCGACCCATACCATGGCAGGCTGATCCATCTGATATGGAGAAGGTGGAAGATTTTAAGGTGGAAACTCTT CCTTTTTATGTTAATCATTTGCTTCCGCTTTTAGTTTGTTATCTTCATATATATTTATGTGAGATGCCTTATTATTGTTA ATTTATCCAAAAGCAGGTTGGAGATTGGGTCAGAGTGAAAGCTTCAGTGTCTTCTCCAAAATATGGATGGGAGGATATTA CAAGGAACAGTATTGGGGTAATTCATAGCTTGGAGGAGGATGGTGATATGGGTGTTGCCTTTTGCTTCAGAAGTAAGCCT TTTTCATGCTCAGTCACTGATGTGGAGAAAGTTCCCCCTTTTGAGGTGGGGCAAGAAATTCATGTGATGCCATCTGTTAC TCAGCCACGGCTCGGGTGGTCAAATGAATCACCAGCTACTGTTGGAAAAATAGTGAAAATTGATATGGATGGTGCTCTCA ATGTAAGCTTAGTTTTTTTTTCCTCTTTTCCTCTTAATTTGTTTTTGCATGATATACTACACCTCTAATGACTTCTTCCA ACTAAAACTTTTGAAGTGTGTTCCATAACTATAGCTATTAGCTAAATAGGACCTAACACAGTTTTATGTGATACTGTTTA ACCTGAAATAGACTCATTTTGGTATGTAAAGCGTATAGAGCCATATAAGCATTGCCTAGGAAATAGCCTTCTTTGGGGGG GTGGACTTTTGCTACTTTATGTGGCTAAAATCGAAGTTTGGCAGAAAAGATTTCGAACAGACCCAGTTGTATGTTGAATT TATGTTCTAGTTTTCACAGTATCTGGGTGCTACTGGTTTAAAACTCTAAATTGATTCCAAACTCGAATTTTTGAGCACAA GTTGATAAGTATTATTAATCTTATATTATAAAAATGAGTTGTCAGTTATTACTAATATCATAATAGAAAAATGAGATGAC AACTTTTGATGGGCAGTCTCCCAGAGACTGGGTATGAGAATTTGCCGATCATTAAAGCTACAACTTTTGCATAAGTGGTC AAATAGTACTTGACGAGAACTTCCAAGGGCATGATCAGGCAAAAATCATTTGATGAAAACCACCTCTATTTATCTTTGTT GATACTTCTTCCTATCTACGTTTGACATGAGAAATTGAGAGAGTTAGATTAAAATATTGACCACCACTTTTACTGATTAA CTAATCTTCTTATAGAGCATTTCATTGACAATGTTATTTCTTATTTCATCCTGAGATTACAACAGACAAGTGATTTAGCT CGTTGTTCTGTTTGCAGGTGAAGGTTGCATGTAGGCAGAGCTTATGGAAAGTTTCTCCTGGAGATGCAGAACGGCTTCCA GGATTTGAAGTTGGGGATTGGGTGCGTTCAAAATCAAGCCTGGGAACTAGACCAAATTATGACTGGAATAGTGTTGGGAG AGATAGTTTAGCAGTTGTGCATAGTGTTCAGGAGTCTGGATACTTGGAGTTGGCTAGCTGTTTCCGTAAAGGGAAGTGGA TCACTCATTATACCGATGTTGAAAAGGTTCCTAGCTTCAAAGTCGGGCAGTATGTTAGGTTCCGAACTGGGTTGGTTGAA CCGAGATGGGGTTGGAGAGGAGCCCAACCTGAATCTCAAGGGATTATAACCAGTATTCATGCTGATGGAGAAGTCAGGGT CGCATTCTTTGGTTTGCCAGGACTGTGGAAAGGAGATCCTTCAGACCTGCAGATAGAGCAAATCTTTGAAGTGGGAGTGT GGGTGAGATTGAAAGATAACGCAAATAATTGGAAATCAATTGGGCCAGGTAGTGTTGGCGTCGTTCAAGGAATAGGGTAT GAAGGAGATGAATTGGACAGAAGCACTTTTGTTGGCTTTTGTGGGGAGCAAGAAAAGTGGGTAGGACCAAGTTCCCATCT TGAAAGAGTTGACAAACTCCTTGTTGGACAGAAGGTTAGAGTCAAACAATACGTAAAGCAACCAAGATTCGGATGGTCAG GGCACAGCCATGCAAGTATCGGGACTATACAAGCAGTTGATGCTGATGGAAAACTTCGAATATACACACCGGCAGGTTCA AAAGCATGGATGTTGGACCCTTCAGAAGTTGATGTGGTAGAAGAGAAGGAGCTCTGTATTGGAGACTGGGTGAGGGTTAG ATCATCAGTTTCAACCCCAACCCACCATTGGGGGGAAGTGAGTCATTCCAGCATTGGGGTGGTGCATCGGATGGAAGATG AGGATCTGCGGGTGGCGTTTTGTTTTATGGACAGGCTATGGCTTTGTAAGGCCGGGGAAATGGAACGGGTTAGGGCATTC AAAGTTGGGGACAAGGTAAAGATCAGAGATGGACTGGTAGCCCCAAGGTGGGGTTGGGGAATGGAGACACATGCTAGCAA GGGACAAGTAGTAGGGGTAGATGCAAATGGGAAAGTAAGAATAAGGTTCCGATGGAGGGAAGGGAGGCCCTGGATAGGAG ACCCTGCAGATATTGCCCTTGATGAGAACTGA
CDS sequence (LotjaGi3g1v0108600.8) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATGTACAAACAACCTATGACTTGGTTATTACATTCTGTTTTGTGCATTTTGCTGGGCATGCCTGCAATACTTGA GGATTTTTCATTTGCCTATGGTTTTGATGACTTTTTCTATTTTAGGTTTGGTTGGCGTGGGCAGTCACGTGATAGCATTG GGACAGTATTATGTGTTGACGATGATGGAATCCTCCGTGTTGGATTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCA GCTGAGATGGAACGGGTTGAGGAATTCAAGGTTGGAGACTGGGTTCGTATTCGTCCAACTCTTACATCTGCAAAGCATGG ACTAGGATCTGTGACACCAGGAAGCATTGGCATTGTATATTGTATCCGACCAGACAGTAGTCTGTTAATAGAACTGAGCT ATCTTCCAAATCCATGGCATTGTGAACCGGAGGAGGTTGAGCATGTTGCTCCGTTTAGGATTGGTGATCGGGTATGTGTG AAGCGATCTGTTGCAGAACCTAGATATGCCTGGGGTGGTGAGACGCATCATAGTGTTGGAAGAATAAGTGAGATTGAGAA TGATGGTCTCTTAATAATCGAAATACCTAATCGACCCATACCATGGCAGGCTGATCCATCTGATATGGAGAAGGTGGAAG ATTTTAAGGTTGGAGATTGGGTCAGAGTGAAAGCTTCAGTGTCTTCTCCAAAATATGGATGGGAGGATATTACAAGGAAC AGTATTGGGGTAATTCATAGCTTGGAGGAGGATGGTGATATGGGTGTTGCCTTTTGCTTCAGAAGTAAGCCTTTTTCATG CTCAGTCACTGATGTGGAGAAAGTTCCCCCTTTTGAGGTGGGGCAAGAAATTCATGTGATGCCATCTGTTACTCAGCCAC GGCTCGGGTGGTCAAATGAATCACCAGCTACTGTTGGAAAAATAGTGAAAATTGATATGGATGGTGCTCTCAATGTGAAG GTTGCATGTAGGCAGAGCTTATGGAAAGTTTCTCCTGGAGATGCAGAACGGCTTCCAGGATTTGAAGTTGGGGATTGGGT GCGTTCAAAATCAAGCCTGGGAACTAGACCAAATTATGACTGGAATAGTGTTGGGAGAGATAGTTTAGCAGTTGTGCATA GTGTTCAGGAGTCTGGATACTTGGAGTTGGCTAGCTGTTTCCGTAAAGGGAAGTGGATCACTCATTATACCGATGTTGAA AAGGTTCCTAGCTTCAAAGTCGGGCAGTATGTTAGGTTCCGAACTGGGTTGGTTGAACCGAGATGGGGTTGGAGAGGAGC CCAACCTGAATCTCAAGGGATTATAACCAGTATTCATGCTGATGGAGAAGTCAGGGTCGCATTCTTTGGTTTGCCAGGAC TGTGGAAAGGAGATCCTTCAGACCTGCAGATAGAGCAAATCTTTGAAGTGGGAGTGTGGGTGAGATTGAAAGATAACGCA AATAATTGGAAATCAATTGGGCCAGGTAGTGTTGGCGTCGTTCAAGGAATAGGGTATGAAGGAGATGAATTGGACAGAAG CACTTTTGTTGGCTTTTGTGGGGAGCAAGAAAAGTGGGTAGGACCAAGTTCCCATCTTGAAAGAGTTGACAAACTCCTTG TTGGACAGAAGGTTAGAGTCAAACAATACGTAAAGCAACCAAGATTCGGATGGTCAGGGCACAGCCATGCAAGTATCGGG ACTATACAAGCAGTTGATGCTGATGGAAAACTTCGAATATACACACCGGCAGGTTCAAAAGCATGGATGTTGGACCCTTC AGAAGTTGATGTGGTAGAAGAGAAGGAGCTCTGTATTGGAGACTGGGTGAGGGTTAGATCATCAGTTTCAACCCCAACCC ACCATTGGGGGGAAGTGAGTCATTCCAGCATTGGGGTGGTGCATCGGATGGAAGATGAGGATCTGCGGGTGGCGTTTTGT TTTATGGACAGGCTATGGCTTTGTAAGGCCGGGGAAATGGAACGGGTTAGGGCATTCAAAGTTGGGGACAAGGTAAAGAT CAGAGATGGACTGGTAGCCCCAAGGTGGGGTTGGGGAATGGAGACACATGCTAGCAAGGGACAAGTAGTAGGGGTAGATG CAAATGGGAAAGTAAGAATAAGGTTCCGATGGAGGGAAGGGAGGCCCTGGATAGGAGACCCTGCAGATATTGCCCTTGAT GAGAACTGA
Protein sequence (LotjaGi3g1v0108600.8) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMMYKQPMTWLLHSVLCILLGMPAILEDFSFAYGFDDFFYFRFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADP AEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVAPFRIGDRVCV KRSVAEPRYAWGGETHHSVGRISEIENDGLLIIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRN SIGVIHSLEEDGDMGVAFCFRSKPFSCSVTDVEKVPPFEVGQEIHVMPSVTQPRLGWSNESPATVGKIVKIDMDGALNVK VACRQSLWKVSPGDAERLPGFEVGDWVRSKSSLGTRPNYDWNSVGRDSLAVVHSVQESGYLELASCFRKGKWITHYTDVE KVPSFKVGQYVRFRTGLVEPRWGWRGAQPESQGIITSIHADGEVRVAFFGLPGLWKGDPSDLQIEQIFEVGVWVRLKDNA NNWKSIGPGSVGVVQGIGYEGDELDRSTFVGFCGEQEKWVGPSSHLERVDKLLVGQKVRVKQYVKQPRFGWSGHSHASIG TIQAVDADGKLRIYTPAGSKAWMLDPSEVDVVEEKELCIGDWVRVRSSVSTPTHHWGEVSHSSIGVVHRMEDEDLRVAFC FMDRLWLCKAGEMERVRAFKVGDKVKIRDGLVAPRWGWGMETHASKGQVVGVDANGKVRIRFRWREGRPWIGDPADIALD EN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 32 | 32 | - | – | |
| SignalP_EUK | 1 | 34 | 34 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| Phobius | 9 | 20 | 12 | - | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| Phobius | 21 | 32 | 12 | - | – | |
| Phobius | 33 | 722 | 690 | - | – | |
| PANTHER | 41 | 721 | 681 | 0.0 | – | |
| PANTHER | 41 | 721 | 681 | 0.0 | – | |
| Pfam | 44 | 83 | 40 | 1.2E-12 | ||
| Pfam | 89 | 146 | 58 | 4.5E-6 | ||
| Pfam | 152 | 209 | 58 | 2.6E-10 | ||
| Pfam | 215 | 264 | 50 | 2.4E-6 | ||
| Pfam | 271 | 333 | 63 | 2.5E-8 | ||
| Pfam | 341 | 462 | 122 | 1.1E-16 | ||
| Pfam | 468 | 589 | 122 | 1.0E-19 | ||
| Pfam | 597 | 651 | 55 | 3.6E-6 | ||
| Pfam | 653 | 716 | 64 | 1.4E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0108600.8, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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