Domain Predictions — View

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PF18346

Source: Pfam

Description

Mind bomb SH3 repeat domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi3g1v0108600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein kinase, putative; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp\|Q9FY48\|KEG_ARATH E3 ubiquitin-protein ligase KEG; TrEMBL-Plants: tr\|I1LLG6\|I1LLG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0108600	Domains G3DSA:1.10.510.10 G3DSA:1.25.40.20 G3DSA:3.30.40.10 IPR000719 IPR001841 IPR002110 IPR011009 IPR013083 IPR017907 IPR020683 IPR027370 IPR036770 IPR040847 PF00069 PF12796 PF13445 PF13637 PF18346 PR01415 PS00518 PS50011 PS50088 PS50089 PS50297 PTHR46960 SM00184 SM00248 SSF48403 SSF56112 SSF57850 cd16568 mobidb-lite	32
LotjaGi3g1v0108600.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein kinase, putative; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp\|Q9FY48\|KEG_ARATH E3 ubiquitin-protein ligase KEG; TrEMBL-Plants: tr\|I1LLG6\|I1LLG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0108600	Domains G3DSA:1.10.510.10 G3DSA:1.25.40.20 G3DSA:3.30.40.10 IPR000719 IPR001841 IPR002110 IPR011009 IPR013083 IPR017907 IPR020683 IPR027370 IPR036770 IPR040847 PF00069 PF12796 PF13445 PF13637 PF18346 PR01415 PS00518 PS50011 PS50088 PS50089 PS50297 PTHR46960 SM00184 SM00248 SSF48403 SSF56112 SSF57850 cd16568 mobidb-lite	32
LotjaGi3g1v0108600.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein kinase, putative; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp\|Q9FY48\|KEG_ARATH E3 ubiquitin-protein ligase KEG; TrEMBL-Plants: tr\|I1LLG6\|I1LLG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0108600	Domains G3DSA:1.10.510.10 G3DSA:1.25.40.20 G3DSA:3.30.40.10 IPR000719 IPR001841 IPR002110 IPR011009 IPR013083 IPR017907 IPR020683 IPR027370 IPR036770 IPR040847 PF00069 PF12796 PF13445 PF13637 PF18346 PR01415 PS00518 PS50011 PS50088 PS50089 PS50297 PTHR46960 SM00184 SM00248 SSF48403 SSF56112 SSF57850 cd16568 mobidb-lite	32
LotjaGi3g1v0108600.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ankyrin repeat domain protein, putative; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp\|Q9FY48\|KEG_ARATH E3 ubiquitin-protein ligase KEG; TrEMBL-Plants: tr\|I1LLG6\|I1LLG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0108600	Domains G3DSA:1.25.40.20 IPR002110 IPR020683 IPR036770 IPR040847 PF12796 PF18346 PR01415 PS50088 PS50297 PTHR46960 PTHR46960:SF2 SM00248 SSF48403	14
LotjaGi3g1v0108600.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase KEG; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp\|Q9FY48\|KEG_ARATH E3 ubiquitin-protein ligase KEG; TrEMBL-Plants: tr\|A0A0B2QMC9\|A0A0B2QMC9_GLYSO E3 ubiquitin-protein ligase KEG; Found in the gene: LotjaGi3g1v0108600	Domains G3DSA:1.25.40.20 IPR002110 IPR020683 IPR036770 IPR040847 PF12796 PF18346 PR01415 PS50088 PS50297 PTHR46960 PTHR46960:SF1 SM00248 SSF48403	14
LotjaGi3g1v0108600.8 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase KEG; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp\|Q9FY48\|KEG_ARATH E3 ubiquitin-protein ligase KEG; TrEMBL-Plants: tr\|A0A0B2QMC9\|A0A0B2QMC9_GLYSO E3 ubiquitin-protein ligase KEG; Found in the gene: LotjaGi3g1v0108600	Domains IPR040847 NON_CYTOPLASMIC_DOMAIN PF18346 PTHR46960 PTHR46960:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM TMhelix	11
LotjaGi3g1v0108600.9 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase KEG; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp\|Q9FY48\|KEG_ARATH E3 ubiquitin-protein ligase KEG; TrEMBL-Plants: tr\|A0A0B2QMC9\|A0A0B2QMC9_GLYSO E3 ubiquitin-protein ligase KEG; Found in the gene: LotjaGi3g1v0108600	Domains IPR040847 PF18346 PTHR46960	3

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
PTHR46960	PANTHER	1	14.29