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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0110800 |
| Transcript ID | LotjaGi3g1v0110800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1; TrEMBL-Plants: tr|A0A151SJF4|A0A151SJF4_CAJCA Putative disease resistance protein RGA1; Found in the gene: LotjaGi3g1v0110800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13631385..13635427) extracted from Lotus japonicus Gifu genome v1.2.
GTAAATGTCCGGTTCCTTCTCATTCTATGTAAGAAAAATCTTTTTTAGTTTCTATGTTTCCTTACTTATGTTTGATTTTA CAAAATGTCATAAATAAGTTAACAAGTCGAGGGGATTTGTATCTCGACTCTTTATTCAATAAAGATTTTGCGTTAAAAAA AACCAAGTTGTGTTGAGTCTCCCTAAAGTGTTCCCTGACCAATGACCATATAATTTCCGTTCCCAACTCAGAGTTCAACT GTTGAATCTGCATCTTGACTCCTATTTCGAAACCAGGTTAGCTCTCTCTCTTTCTCTGTGTTATTGAATCAGTAAGGTGT ATTTCCTTTGAAGAAAGCACTTCTGATCTTCATGAATTATGATATAGCAAGGGACCTTATATCTTCATGAATTATGATAT AGACTATGATTGTAGCCTAGTTAGCTTTTTATTGGAGGTGGATCATCTTCTTCTAGTTTTTTTTTTTTTTGTTTGTTTCT TTTTCTGAATTAAAGGTATGGTTTTACTTATGCTTGTATTGAATTTCATTTGCCAAAGGATGGAAGCCATTGCTTGTCTT ATCTTGGAAAAACTGAGCTCTTCAGCTATCAAAGAGTTTGGAATCATTTGGAATCTCAAAGATGATCTACAAAGAATGAA GAACACAGTCTCTGCAATAAAAGCTGTGCTCCGTGACGCCGAGGCCAAGGCCACCACTAACCATCAAACTAGTAATTGGC TGGAGGAGCTGAAAGATGTACTCTATGATGCAGATGACTTACTTGATGATCTGTCTACAGAAGATTTGAAGAGGCAAGTG ATGATTGGAAATAAGTTTGTGAGAAAGCTACAAATCTTCTTCTCAAAATCAAACCAAATTGCCCATGGTCTTAAATTAGG CCATAACATGAAAGCAATTCAGAAGAGGCTTCATGATATTGCTAATAATAAACAGGCACTGCAATTGAGTGACCACCCTG TGGAGACTCCAACTGCATATAGGGAACAAAGACAAACTTACTCTTTTGTGAGTAAGGATGAAGTCATTGGGAGAGAGGAT GAAAAGACACTCCTTACAAGCTATTTACTACACAACAGTGTGACAGATGATGTTTCTGTGATTCCAATTGTTGGGATTGG AGGATTAGGTAAGACAACACTTGCTCAACTTGTTTATAATGACAATGCTTTCCAAGACTATTTTGAGCAAAAGATGTGGG TGTATGTCTCAGATGAATTTGACATTAGGAAAATAGCTCAGAAGATGATTGGGCAGGGTGAGAATAGTGAGATTGAGCAA GTGCAGCAAGACCTCAGAAACAAAATTCAAAGGAAGAAATATTTTCTTGTGTTGGACGATGTGTGGAACGAGGATCGTGA ACTGTGGCTTAAATTGAAGAGCTTGCTCATGGAAGGTGCAAAGGGAAGCATGATAATTGTAACGACACGGAGTCAGACAG TAGCGAAAATAATGGGCACACATCCACCCCTTTTCTTAAAAGGTTTGGATTCACAAAGATCTTGGAAGCTATTCTCTCGA GTGGCATTCAGTGAGGGAAAAGAACCAAATGATTTGGAGTTGTTGGCCATAGGAAGGGACATTGTTAAAAAATGTGCTGG CATTCCTCTTGCAATAAGAACTATTGGTAGCCTCTTGTATTCTCGAAATTTAGGCAGCAGTGATTGGCTATATTTCAGGG ATGTTGAGTTTTCAAGGATAGAGCAGCACAAGGACAAAATCTTTGCAATCCTTAAACTGAGTTATGACCATCTTCCCTCA TTTATGAAAAACTGTTTTGCTTATTGTTCATTGTTTCCTAAAGGCTTCGAGTTTGAGAAGAAAACACTCATTCAGTTATG GGTAGCTGAGGGATTCATTCAACCAGGAAATGACATTAGATGTGTAGAAGAGGTTGGTCATGTGTACTTCATGAATCTGC TGTCAATGTCATTCTTCCAAGATGTCACTATGGAGGATTGGGGTGATGTAAGTACTTGCAAAATGCATGACCTAATGCAT GATCTAGCACAATTAGTGGTTGGAAAAGAATATGCTGTGGTTGGTGGAAAAGAAGCAAACATAGGAAACAGAATACGTTA TTTGTCTTCTCATACCGTGTTGCATTTTTCACAGACAACATCCTCTTCCTACAAGTTAAGGACATATCTCGTGCTAAGTC AACAAATTCATGCTAGAAATTGTTTGGATCAGTTGTATTTTGATTCTCTTCTAGGCCTAAAGTGCTTGCGAGTGTTAACA CTTAGCGGACCAGGTGTTTTCGCAATTCCAAAAATTTTTAAAGAGTTGAAGCATTTGAGATATGTCGATCTTTCAAGGAA TAGAGCGCTTCAAATTCTTCCATGGGTCATTACTAGTCTACATCACCTGCAAACTCTAAAACTTTCTGAATGTCCTGATC TCACAGAATTACCAGAAGATATCAATAAAAGTCTCAGGCATCTTGAGTTGAATGGTTGTGAGGGATTGAAATGTATGCCG CGCGGGTTGGGACAGTTGACCAATCTTCAAACACTAACACATTTTGTGTTGGACCGCAGAAGCACAAGATGCAGCAGTGT AAATGACTTGAGTGGACTAAACAACCTTAGAGGGAGATTAGAAATCAAATGGTTGGATTCCCTGCGCTATAATGCTGGGG AGGTTGAGTGTGCCAAGGTTCTTCTTGAGAAGAAACATCTACAAGAATTGGAGCTGCGGTGGTGGTATGATGTGGAGGTT AGACCAAGTCCATTATTTCGGGAGGTTCTTGATTTAGACAGTGGGTCGGAAATATCAAAACCAGAAGTAAACAACAACTG GTTGGAAGATGAGATGATCTTACAAGGATTGCAGCCACATCACTCGCTTAAAAAACTAGTAATAGATGGATTTTGTGGGA AAAGGTTACCAGACTGGATAGGGAATCTCTCATCGCTCGCGAGTCTTGAAATCCGTAATTGCGGTGGTTTGAAATTGCTA CCTGATGGAATGCATAACCTCATGTCTTTAAAGAAATTATGCATATATAACTGCTCACTGTTAGAGAAAAGATGTGCAAG ACCATATGGTGAAGACTGGCCTAAAATTGCTTGCATCCCAAAAGTTGTGATCTCTCCCATGTCACCGTCCGCTATGAAGT ATTTTACTTGATTCAAGATCTTTCCCTGGTTGTGGAGGAGTTTCTGAATCTGCTTTCTTGATCTAATCTCCATGTATTTG ATCCCTTGTGTGTCATCCGGCCTCCATAGTCTCTTCACTCAGCTTCCCTGAAGGCTTAAAAATCCACCCGTATTCATGTG ATTTCTTTTGCACTTAGATAGCTTTATACAGTTTTCTTTCTTCTCTTGCCTCATTCAGTCTTGGTCTGTGCTTTCCCATT CTGTGTATGACTCATGTTGGGATGAATGAAAAGAAGGCAGCAAAGTCTCTTTATTTCTTATTGTGTCAATGAATATTTTG TTACTATGGGTTAGTGGTTCATATTGCTTGTGATTGAGGTAAGCTTCTCTTCGCGATTTAAATCTTTTTCATATTAATTT TTCGCCATTTTAATCACATTATGGTTTTGATATTGGGATTACATACATCTGTTTTGATAGATGGATTCCATGGCCTTATT TATTCGGATCATGCATATCATTTGCTGACTTGAATTGATTGTTTTGTTGCTTCAAAAACTAGCTGTCTTTTCCCTTTAGA TTTGTTGCTTCGTTATGTAGAATCTGTCTTATCTTTTTTCTTCACGCAGAACATTTCTATGTTTCTTTGAGATATCACTT CAGTGCAATCTACTATGTGTTGCTCCATCTTCTAACTTTAAGGCCTATTCTTTTCCAATTTACAACATACAGAAATTTGA TCTACTAATGCAAATCCCTCAAGTATATGGCTGTCTTACTGATTTTGCGAAGGTATCAGAAACAAATTAAGATCTGTACA GCAGAAACTACTCTCATGCTCCTCTCTATTTAAGTAGCACCAGGGTTAGAACCAGAAAAAATTGGTAACGCTGTGGAAAT TTAATACATTAAGAATGACTAATTAGAATAGACAGTATTAATG
CDS sequence (LotjaGi3g1v0110800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCCATTGCTTGTCTTATCTTGGAAAAACTGAGCTCTTCAGCTATCAAAGAGTTTGGAATCATTTGGAATCTCAA AGATGATCTACAAAGAATGAAGAACACAGTCTCTGCAATAAAAGCTGTGCTCCGTGACGCCGAGGCCAAGGCCACCACTA ACCATCAAACTAGTAATTGGCTGGAGGAGCTGAAAGATGTACTCTATGATGCAGATGACTTACTTGATGATCTGTCTACA GAAGATTTGAAGAGGCAAGTGATGATTGGAAATAAGTTTGTGAGAAAGCTACAAATCTTCTTCTCAAAATCAAACCAAAT TGCCCATGGTCTTAAATTAGGCCATAACATGAAAGCAATTCAGAAGAGGCTTCATGATATTGCTAATAATAAACAGGCAC TGCAATTGAGTGACCACCCTGTGGAGACTCCAACTGCATATAGGGAACAAAGACAAACTTACTCTTTTGTGAGTAAGGAT GAAGTCATTGGGAGAGAGGATGAAAAGACACTCCTTACAAGCTATTTACTACACAACAGTGTGACAGATGATGTTTCTGT GATTCCAATTGTTGGGATTGGAGGATTAGGTAAGACAACACTTGCTCAACTTGTTTATAATGACAATGCTTTCCAAGACT ATTTTGAGCAAAAGATGTGGGTGTATGTCTCAGATGAATTTGACATTAGGAAAATAGCTCAGAAGATGATTGGGCAGGGT GAGAATAGTGAGATTGAGCAAGTGCAGCAAGACCTCAGAAACAAAATTCAAAGGAAGAAATATTTTCTTGTGTTGGACGA TGTGTGGAACGAGGATCGTGAACTGTGGCTTAAATTGAAGAGCTTGCTCATGGAAGGTGCAAAGGGAAGCATGATAATTG TAACGACACGGAGTCAGACAGTAGCGAAAATAATGGGCACACATCCACCCCTTTTCTTAAAAGGTTTGGATTCACAAAGA TCTTGGAAGCTATTCTCTCGAGTGGCATTCAGTGAGGGAAAAGAACCAAATGATTTGGAGTTGTTGGCCATAGGAAGGGA CATTGTTAAAAAATGTGCTGGCATTCCTCTTGCAATAAGAACTATTGGTAGCCTCTTGTATTCTCGAAATTTAGGCAGCA GTGATTGGCTATATTTCAGGGATGTTGAGTTTTCAAGGATAGAGCAGCACAAGGACAAAATCTTTGCAATCCTTAAACTG AGTTATGACCATCTTCCCTCATTTATGAAAAACTGTTTTGCTTATTGTTCATTGTTTCCTAAAGGCTTCGAGTTTGAGAA GAAAACACTCATTCAGTTATGGGTAGCTGAGGGATTCATTCAACCAGGAAATGACATTAGATGTGTAGAAGAGGTTGGTC ATGTGTACTTCATGAATCTGCTGTCAATGTCATTCTTCCAAGATGTCACTATGGAGGATTGGGGTGATGTAAGTACTTGC AAAATGCATGACCTAATGCATGATCTAGCACAATTAGTGGTTGGAAAAGAATATGCTGTGGTTGGTGGAAAAGAAGCAAA CATAGGAAACAGAATACGTTATTTGTCTTCTCATACCGTGTTGCATTTTTCACAGACAACATCCTCTTCCTACAAGTTAA GGACATATCTCGTGCTAAGTCAACAAATTCATGCTAGAAATTGTTTGGATCAGTTGTATTTTGATTCTCTTCTAGGCCTA AAGTGCTTGCGAGTGTTAACACTTAGCGGACCAGGTGTTTTCGCAATTCCAAAAATTTTTAAAGAGTTGAAGCATTTGAG ATATGTCGATCTTTCAAGGAATAGAGCGCTTCAAATTCTTCCATGGGTCATTACTAGTCTACATCACCTGCAAACTCTAA AACTTTCTGAATGTCCTGATCTCACAGAATTACCAGAAGATATCAATAAAAGTCTCAGGCATCTTGAGTTGAATGGTTGT GAGGGATTGAAATGTATGCCGCGCGGGTTGGGACAGTTGACCAATCTTCAAACACTAACACATTTTGTGTTGGACCGCAG AAGCACAAGATGCAGCAGTGTAAATGACTTGAGTGGACTAAACAACCTTAGAGGGAGATTAGAAATCAAATGGTTGGATT CCCTGCGCTATAATGCTGGGGAGGTTGAGTGTGCCAAGGTTCTTCTTGAGAAGAAACATCTACAAGAATTGGAGCTGCGG TGGTGGTATGATGTGGAGGTTAGACCAAGTCCATTATTTCGGGAGGTTCTTGATTTAGACAGTGGGTCGGAAATATCAAA ACCAGAAGTAAACAACAACTGGTTGGAAGATGAGATGATCTTACAAGGATTGCAGCCACATCACTCGCTTAAAAAACTAG TAATAGATGGATTTTGTGGGAAAAGGTTACCAGACTGGATAGGGAATCTCTCATCGCTCGCGAGTCTTGAAATCCGTAAT TGCGGTGGTTTGAAATTGCTACCTGATGGAATGCATAACCTCATGTCTTTAAAGAAATTATGCATATATAACTGCTCACT GTTAGAGAAAAGATGTGCAAGACCATATGGTGAAGACTGGCCTAAAATTGCTTGCATCCCAAAAGTTGTGATCTCTCCCA TGTCACCGTCCGCTATGAAGTATTTTACTTGA
Protein sequence (LotjaGi3g1v0110800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAIACLILEKLSSSAIKEFGIIWNLKDDLQRMKNTVSAIKAVLRDAEAKATTNHQTSNWLEELKDVLYDADDLLDDLST EDLKRQVMIGNKFVRKLQIFFSKSNQIAHGLKLGHNMKAIQKRLHDIANNKQALQLSDHPVETPTAYREQRQTYSFVSKD EVIGREDEKTLLTSYLLHNSVTDDVSVIPIVGIGGLGKTTLAQLVYNDNAFQDYFEQKMWVYVSDEFDIRKIAQKMIGQG ENSEIEQVQQDLRNKIQRKKYFLVLDDVWNEDRELWLKLKSLLMEGAKGSMIIVTTRSQTVAKIMGTHPPLFLKGLDSQR SWKLFSRVAFSEGKEPNDLELLAIGRDIVKKCAGIPLAIRTIGSLLYSRNLGSSDWLYFRDVEFSRIEQHKDKIFAILKL SYDHLPSFMKNCFAYCSLFPKGFEFEKKTLIQLWVAEGFIQPGNDIRCVEEVGHVYFMNLLSMSFFQDVTMEDWGDVSTC KMHDLMHDLAQLVVGKEYAVVGGKEANIGNRIRYLSSHTVLHFSQTTSSSYKLRTYLVLSQQIHARNCLDQLYFDSLLGL KCLRVLTLSGPGVFAIPKIFKELKHLRYVDLSRNRALQILPWVITSLHHLQTLKLSECPDLTELPEDINKSLRHLELNGC EGLKCMPRGLGQLTNLQTLTHFVLDRRSTRCSSVNDLSGLNNLRGRLEIKWLDSLRYNAGEVECAKVLLEKKHLQELELR WWYDVEVRPSPLFREVLDLDSGSEISKPEVNNNWLEDEMILQGLQPHHSLKKLVIDGFCGKRLPDWIGNLSSLASLEIRN CGGLKLLPDGMHNLMSLKKLCIYNCSLLEKRCARPYGEDWPKIACIPKVVISPMSPSAMKYFT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 8 | 91 | 84 | 2.2E-22 | ||
| PANTHER | 25 | 823 | 799 | 5.2E-158 | – | |
| PANTHER | 25 | 823 | 799 | 5.2E-158 | – | |
| Coils | 30 | 50 | 21 | - | – | |
| Coils | 61 | 81 | 21 | - | – | |
| SUPERFAMILY | 145 | 416 | 272 | 2.29E-64 | ||
| Gene3D | 147 | 309 | 163 | 1.2E-37 | – | |
| Pfam | 183 | 403 | 221 | 9.7E-43 | ||
| PRINTS | 187 | 202 | 16 | 5.1E-20 | – | |
| PRINTS | 255 | 269 | 15 | 5.1E-20 | – | |
| PRINTS | 352 | 366 | 15 | 5.1E-20 | – | |
| SUPERFAMILY | 481 | 828 | 348 | 3.57E-32 | – | |
| Gene3D | 518 | 834 | 317 | 1.3E-33 | ||
| PRINTS | 581 | 597 | 17 | 5.1E-20 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi3g1v0110800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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