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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0120200 |
| Transcript ID | LotjaGi3g1v0120200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein, putative; TAIR: AT3G53170.1 LOW protein: PPR containing protein; Swiss-Prot: sp|Q9SCP4|PP279_ARATH Pentatricopeptide repeat-containing protein At3g53170; TrEMBL-Plants: tr|A0A072UTT3|A0A072UTT3_MEDTR PPR containing plant-like protein; Found in the gene: LotjaGi3g1v0120200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:14709245..14719682) extracted from Lotus japonicus Gifu genome v1.2.
AAGAATTCCTTACCTAACTCAAACAGTTTGATTAAACATTTCCAATTTGAGGTTACCTCAAAAAAATTAACCAATTTGAG GGTTGACCTTAATTGACTTTTTTTTTAGAGTGAAAGCTTTTGCAATACTGACTCGTCAACCCCACTCTTCTTCTCTATCC ATATCGCTAATGGAGCTTCAACACACACCCCTGACATGGTCCTCTTCCATCTCCTACACACCACCGCTAACCCATTCAAC GAACCAGAACCGCCGCAACTTACCACCAACGCCACCTCTTCCTTTCCGCGTCCAGTCGTTGAAGCGGTCCTCTAAGCCGG CGTCTGAGGGGCTCCAGAAGGACCCCAAGAAGGCCCTGTCTCGCATTCTCCGAACCGAAGCGGCTATCAAAGGCGTCGAG AATAAGTCTAAGGCGTGGAAGCACCAGCGGACACAGCTTTGGCCTAAGGCTGTTCTTGAAGCATTGGATGAGGCCATTAA TGCGTCTCAATGGCAGTCTGCTCTCAAGGTTGGTCACAATTTCAATTTTTTGTTTTTGTTTTTGGGAAATTTTCATTTTT CGCTCTGACCCATGATTCTGTTGTTGACTTGAATGTATTTTTGGATTTGCTTATGATGTTTTTTTATTTTTTATTTTTTT TATTTATTTATAACACAATTAGAGGGTAAAGAGATTATGGGAGGAGTGGACAATAAACTTACATGTTTTTTACAATGAAC TTTTGGATTGAAACTACTGCAATGGAGTGATTAATGAGCTATGAAGCTGCTTTGAAGTGATATGTTTGTTTTGTCAATAG GGCGAAGACAGACATGATTTCACGTATCTCAATGTATCAACAGAGAAGCTAGAATTTTCCATGTTGAGTTTAATGTGGGT GGAAGAAGAGGATTTTGACACGCTAACTTCAACATGGATCCACGTTGAGTTTAATGTGGATAGAAGATGCATGATTTTGA CACGCTGACTTTAACATGGATCCACGTTGAGTTTAATGTGGATAGAAAATAAGTATGTCATTGTCAAGTGTGATGTTCTG TTTTGGAAATTGGAGATGTGACCCTTGAAATGTTTCATTTGGATTCATTAGGGAAATCTTGTATTTTAGAGAAAGCATGG ATTTCAAACATGTATACTGATGGTTGGTTTTTTAGTGTGCTCAATTGCTATTTCTACCTTCATCCTTGATTTTGTCATTC ACTTGCTGTTTCTTGTCTGCATCACACAATCATGATGGTTTGGTAAAATTAGTGACAGTCTGAATAATATCATACAGTAT GTGAATGTTACACATGGCTGAATCTTGTTTTTTTGTTGAGAAGCATGCTTGGAATTGGTTCTGGGATAATAGTTTAGCCT TCAGTTATGTCTGAAATATGACCGTTTCCCTTCTGCAGGTTTTTGCACTTCTTCGTAAGCAACTCTGGTATGAACCGAGA AGCCAAACATATACAAAACTGTTGATGATGCTTAGCAAATGCAAGCAGCCTGAAGAGGCTGGTTATCTCTTTGAGATCAT GTTATCTGAAGGGGTTAAACCTACTGTTGATGTCTTTACTGCTCTCGTAAGTGCTTATGGTCAAAGTGGTCTGTTTGACC AGGCACTTTCTACTATTGAAGATATGAAAGCAGTTGTTGACTGTGAACCAGATGTATATACATATTCTGTTCTTATCAGC TGCTGTGCGAAATTTCATCGTTTTGATTTAGTCGAACACATTCTTGCAGATATGCGATATCTGAACATTGAATGTAACCA TGTGACATATAATTCTATTATTGACGGATATGGTAAGGCTGGCATGTTTGAACAAATGGAGAACTCATTGATAGATATGA TTGAAAATGGCAACTGCAGTCCGGATGTTTTCACGCTGAATTCTTTTATTGGATCTTATGGAAATGGTGGGCAAATTGAT AAGATGAAGAAGTGGTATGATGAATTTCAGCTAATGGGCATAAAGCCAGACATTAAGACTTTCAATATGATGATAAAGTC CTTTGGCAAAGCAGGCATGTATGAGAAGATGGAGTCTGTGATAGATTTCATGAAGAGCAGGTTTTTCACTCCCACAACTG TAACATATAATACTGTCATTGAGGTGTATGGCAAAGCTGGAGAAATAGAGAAGATGAATAACTATTTTAAGAAAATGAAG CATATAGGAATGAAGCCTAACTCTGTAACTTATTGCTCACTTGTCAATGCATATAGCAAAGCTGGTCGTATTGACAAAGT TGACTCAATCATGAGGCATGTAGAAAATTCTGATGCAGTATTGGATACTCCTTTCTTTAATTGCATAATCAATGCATATG GTCAGGCTGGTGACATAAATAAGATGGGTGAATTATTCCTGGCAATGAGAGAAAGAAAATGTGAGCCTGATAGCATCACT TTTGCTTGTATGATCCGGGCTTACAATACCCAAGGGATGACTGAGGCTGCTAAAAAGTTGGAAACAATGATGATTGCTAG CAAGGATAGCTATGGTATATTGCAATTTTAGTAACTTTATCTTCAGTGAAATTTCTCTGTATTGTCCTATTGTGATTGGT AGTTAATGCCTCATTTTCTAACGTTCCTTATTCTGTGTGTTTCTGCTCCTTTGTATTCATGTCAAGTCTTTTATTTTTCC CTTCTATCAATGTTCTTGTGACCTCTGTAGCATTCTTTGCCATCATCATATAGGCGCCAGTAAGGCATTAGTTCAACCTG CATTTAAGTGCATCACTCTTCTGACCCTGCCCCAACATTGGCCTCGGTTGGGTGTCTGCTATTTAGAAGTTATTATCAAA GTATATAAAAGGAAAAATAAGGATGGGTTAATAGTTAAAGATACTGTCAAATCTAGTAATTAGGAGAGAATAGTTCTAGA GCAGAATTGTTAGAAGTAGATATCATTTAATATAGTAATTAGAAGAGAATAATTCTGGTACGGAATTATTTGAAGTCGAT AATCGATATTGTTAAATTTAGTAAATAGAAGAGAATCATTTCAGAGTTATTAGAAGTAGATATTGTTAAATATACTAATT AGAAGAGAATCGTTTATAATGGAATTAGGACTATTAGGAGCATGACAATTGGGTCCTTAGGGAATGAGGTGTAGACCCTC GAAGATCAGCAGAACTGTAATTAGGGGAATTTTCAATATTTTTCTAATAAAATATCAGGTTCCTAACAGCCTCTTCCCTT AATCTTGCGGTGATAATCCAGTGAGATTATAATCTATCTTTGAATGCTGCAATTTTCAACTTTTTTGCCGCTGGTTTTTT TTTTTTTTCAATGGCCCTATTGTTTTGGCATGCACCCTTTGTCCTGGTCAAGTGTTGATACTGTCAACAGCTTTTACAAT TTCGCCAAAGCCGGCGTGGGGTCAGTTAATTAGATTGATTCATGCCATTGGGCTCTACCCAAAACAAAGTTTTAGTAAAC CATATAGACCAAGATATCTCTGTTTCATTTCATTCATTTTTCTCTATGTAGCCTCATTTACTCCTTTTCTCACATGACCA AACCACCTTAAACAAGTTTTTGTCATCTTAACCCCTTAGTAGGTGGTACTTCAATCCACCGTTGCATTCTCATACTCTTC AGTCTTCACTTAACCTTTGCACTTTTATTTCATTACATAGTAATAATTAAATATAGTATTTCTAGTCGTCTAGCTTTCAT ATGTAAATAAAGCTGTCAAGGGGAGCTATGGCTTATGGGTCTGCCAACTCATACCACCAAATATTGTGTTGTTTGAGTTG GTTTTTCAGCTCACATGTAGTTGAGCCATTTAGATTTAGAACACTTAACCTTTGGGTTATACAAGTTGGAGCCTGGTTTA TGTGAGATGATTTGGTTAAACACTTAAACTTATTAAAAAATTGATGTCTAGTGGCTCATTCCATCCCCAGGCCACACTTT ATGCTGGAATGTATCTTCTTTTCAGGGTGGGGGTTGTATATTGCAATTAATAACTAGGAATTAATTTGTATAATTTCCTA ATATTAGAGATGATAAATCATGTTTTGTATATTCGATCATGTTGGGGATTTCCTCAAGCAATTTGAAAATATGTCCTTCC TTTTCAAGTCAGCATTAGTGCTCATCATTCTTGGGTCTGAAACCCTAGGCTGGCGCATGTTTGACAATCATTCAGGCTAG ACCTTAGTCTCAATGTTTTTAATTGTCCAAGTGAGGACATGGTCCATGTCAAGGAACCTTGGTAGACAAACCTAGGACCA CTGTTGTAAGAATGGTCTCCATATGCCTCCATGCTGTCTGTTGTTTGCTGGCCTTTGTAAGTTGTGCTTCTTTCAGATCA CCATTTGTCACACTGACACAGCGGGTGCCATTTGACTAGTCTTTCTTTTCTGGTGCTTAGCAGCCTCATTCTCATCTGGC TTAGTTGTCTTGATGCTTTGAATCATGACTATTTTGAGTTTATTTGGTTTTTTTTCCCAGCCTTTTTTTTTTTGGGGAAA ATGGCTTCATGCATGATTAAAACCTTCAACCTAGCTGCAACCTGAGTGCTCTCCCATCTAATGCTAAAAGTTCATTTGGT ACATTGGGTCTGATGTAGTTAGTTTAGTAGCCCATAAAAGGATTGGGTGTAAGTTCTCATAATTGTTTGTTAGTGTTAAA AATAATAATGATAATACGTATAAAAATAATAGAGAAATTAAATGGAATAAACAATAAATTTGAAAAATTAATAATAGAAA TAATAAAATATAAAGACAAATATACTCAATGAAATATATGATTCAGGGGGTTCAATCCAAACTGACAATGGTGAATGATG TTCATATCATGTAGTTTGTATGATAGCAATAGTGCAAGAGTCGTTTTTTTTTTTTTACAACTAACACCCAAACTAGTCAA TATCTTTATTTGTATATTGAATCTGTTGAACTACAGTGGTTTTTTTGAATTGAGCCATCCTCTGGTCATAGTCAAAGGTT GATGGTAGGAATCTTGTAAGTGATTTTTGAAAGTATTTAAAGACTGTCTAGGCTAACCAAATCATGTAACTATGGTATTT AGGGTAATGAAGATCTTTCTTTACATTATTTAGCCTGTATAATTCAGGCAACATATTTCATCATGTCTCTCGTTTTTTCG TTTTGCTTTACACTTGCCAAAGGCTAAAGTATTCAAGTCTACCATCCCGAGGACTTCAACAACCTCTTGATATTCTAGAA GTAACTTAGGAAGATGAAATTATGAGGCAATAATGGACGGTGTGGATCGTCTATCTAAGTAGAACCGTTTCATCCTTTTG AGAAATTCTTTCGTGTCTTGGTTTCTGGCCTTCCTCTATATATCCAAAATTCTAACTCTCTAGTATTACAATCAGTTAAG TGGGGGGGGGGGGGAGGTATCCCCTGCTATTTGTCTATTTCTCTAGTCTAGAACCTTTTCATTATTTTCTTGCTATTAGG GTTAGGGCATTGATTCTAGAAATGGGCCCTGATCAGTAGAGTGCAAGGTGTATTTATGAAAGAAATTCCATGGAAGCCAA GACAGTTTGAGGAGAGGGAATTTATGGGAAGGTAGCGGTAGTGCACTTAGAATTTAGCAGAGATGAGTGGGCTGAGGTAT TTGTTCTGCGTCGCGTAGTTGTAGATTATAGCTGTGTCTTGGGGCTGGAGATTAGTTTGCTCTTATCAAGGGTGATATTC TAGGGAAGCCAGACCTGTGGTCCTCTTTGTCTTGATATAGTTGCCTATTATCAGCAATAATAATTGGTCTTGAGCTTTTT TTTTTCAAACTCGTTCTGGATCAAATTTGTACTTTCTGGTTACTCTTTTTCCCAAGAATGATTTTCATACCTCTGACGCT CCTTACCAAATGATTAACAGATGCTAAGTTGATTGGATGCTAGCACGGCCAATTTGATTGCAGACTTAACACTTCCAGAC ATCACTTTCCATGGTGATCCTATCCTGACTTGGAAAGATATGAGAACCTAAGCAGGTAAACATACATTCTACTCAACTAC ATGGTTATTTTGAGGTAAACTCTTATTCACCTGTCAATTTTATAGCTATTTACTATATTATGTTCAGGAGGATATAGCTT CAGACTTTTATACATTGTAGTTGGATAAAAAAGAAGATTTGAAATTGTTGACGTGTAAGTGATACTTCCATAAGATATCT TGCTTTTTATTCTATGATATATATGACTTGAACTTCTTTGATATGAAGATTTTCAACAAGATCTATTTTGAAAAATGTAG TTGTATTTTATTATATGCATTTAAAGCGTTATCCTGATTAGATTTTCTTTTTCTTTGTTTCTTACAGCTGCTTTACATTC TATTTTGCCAAATATTCATTTTAAGATAGAAACCTATACAAACTCAAAGTACTCTGAAATATAACCTGACATTTCCAAAG CATTATGTAGTCAAATGTACCTTGAAATCTGGGCAAAACTGTATGTACTTTGACCCTAAGTGATGCCCATCATGTGAATA GAGTTTGCTTCTCCAGGTGCTAATTTTCTTGGGTAGCACCTTGTTCAGATTCTTGTAAAAGGAAGCTGTTCTTTCTTTTG TTGTTTCATGCTGAAATATGTTTCAGTTTTATGTTGATTTCAATTTCATCAGGATAGGTAAATTTCTCTGATCATGGAAA ATAATTGAGTCTGCCTGTCACCTGATTTTATCATTGATTCTGTTAACATGTCCTCAACTGTTTAATCATTGACTGAAAAA CGAACCTGGAAGACCAGAAGTTCAATTCATGAGTGATTGTACCAATGACTGTTTGTTTATATTTGGTCTGAGGGCAAAAA GTGGGAGAAATTTTAGGTGAGTATGTTTCCAGTAGGTGGTTAGTGTTATCACACAAATAGGATAAATTGTCATCCCTCCA TCACCTTTCTATCATAAGAGAAATAGAAAGGCTGTAGGCAATTAAAATTCCAAATAGTTAGTTTAACTGACTATTTCAGT TGGCCATTGTATTGAACCTTAGTCTGTTAGCAGTTAGTTACATGTTAATAAATAGAGTGTTAGTGTAACAAGGAGGATTC ATTCAATTGTGTTCTGTTTTGAGGGGAGGACTGGCCTCTCGAGAGCCACGTGTAACCATTTTGTTTCAGTTTCTACTTTA TCTGGAATTCTTCATTGAACTGGGTCTCTTCTCCACATTGGAGTAAGGGAAACCAGGACTTTCCCAATAAGATTTCAGTT TCTTTCTCCCATATGATCCAATTCTATCAACTGTTATCAGAACTCCTTTCTAGGAGCTGTGGGTGTTAGTCTTCCAGCGA TAACTCATGGTCAACAAGAAGATGGAGAACCGCAATGAAGCATTAAAGCGGAACTGGGATTCCATATGGGAGAATCAAGA ACAGAGGATGAAAAGATTGGAACACGTGTCACGACCCATAATCTTAAGTTGTAACCGGCGAACAGGCTGTCACCGTAGCC TGGCAAGTTTGTTTCTCACAAAATATTTAACAAAGCAATTTCCAACAATAACCACGTTCACAAAATTTTATAAAAATTTG ACAGAGGAGCTTTGTATTTTCAACAATTTCAAAATAATAGAATCTATCAAATGAGATTCAATGCAACCAGAATTCTAAGA AAATATAAATTCCAAATCCAACACTCATGTGCAAAGTCTTATGACAAAACATAAATTAACAAAATCATAGTAAATCCACC TACGACTCTATAGCTGTAGTATAAACAAAATCTAAAAAAACAGACACCAACAAGGCCACCAACCAAAGGGAGCCTACAAA CAAAATAAACTGAATGATTTGAATCTAGGACTAGCCTTCTACTCAGCTTCGTTAGAATTTGTTGATGAAAAATAAATGAA CGGGTAAGTCATAAAGACCTAGTGAGGATTTAGGAACCACCATGAACTAGAAGGGGAAACACATCAGACACTTGTTTTTC ACTCTCAAACTCAATGTAGATGATTTCTATCATCAAGAATATTAATATAATAGGGTCAAATGAAGAATCATTAGGCGACC CCATCTCGCTAATAGCCCTCTCCTCTTGAGGGATGACCTCTCTGATAAGGGCGGCTCCATATAAGGGCAGCTCCATCTAA CCGATAGGTCTTTCCTCTCACACCACATGTCGTATTATATGATAGTAATCTTTTAAATTGAGTTTGAGTGTGAAAAACTC GTGCCTGATGTGTTTCCCTTCTAGTTCCAGGTGGTTGCTAAATCCTCACTAGGTCTTTGTGACTTATCCTTTCATTTAGT TTCATCTACAGATTCTGACAGCTGAGTAGTTGGTTGTTCCCAGATTTAGATCATTTAGTTTATTTTGTTGATAGCCCCCT TTGGTTGGTGGCCCTATTAGAGTTTGTTTTGTTGGATTTTGTTTTATCTGCAGCTATAGGGAGTCGTATCTGGATTTACT TTGATTTTGTTTATTTATTTTTTATTTTAAGGGTTTGCACACGAGTGTTGCATTTGGAATTTTTATTTTCTTGGAATTTC TGTTGTATTGAATCTATTTGACAGGTTCAGCTATTTTGAAATCGTTGAAAATACAGATGGTACTGTCGAATTTTTATAAA TTTTTTTATAAAACTCCGTGAACATGTTTATTGTTGAAAATTTGTTTGGAACATGTTTTAGTCGTCTGATCCGGATACGA CAACATGTTTTAGTCGAGATGTGCAATGTGTTTTGGTTGCACAAACTTCTAGGCCAGAAATTCCAGAAACTCGCGAGCAC GAGTAGAGGGAGCAAATTGAAGAAGTAAATAAGTTGACAAAGGAGAGATTATTTGTTGACAGAATTAGAGGAAATCTGTT AAAACTTAAAAGCTCAATCAGATGTGGGAATACGCTAATAAACACAGGGAGATTGATTGAGTTTTGAGTGGTTGATTTGG TATTTTCGAAGCTTCAACCATATAGACAGAAGTCTCTAGCAAGAAGGCCCAATGAGAAATTGAGTCCTCGTTTTTATGGA CCATTTCAAGTACTTTTGGACAGGTTGCTTATAAATTGGAGTTGCCTTTGCTTAGTAAAACTACATCCTGTATTCCATGT ATCTATGCTGGAAAAAATTAAAGGACCAAATCTGAGATCTGAGCCGCCTGAAGTAGAGATGGAGTAGAGACATGGAAGAT GGACAAGTGGAGGTTTTGATCAAATGGGAGGATTTAGCAGATTGGCAGAGTACTTGTGAAGCAGCTTCAGTAATTCAACA AGTTTTTCCTACTATCCACCTTGAGGACAATGTGAGTCTTTTAAAGGAGGGGGGGGGGGGTATTGATAAACTCAGACCTC CGATCACTAAGGTTCTATCATAGGAGACACCGAAAGGCTGTAGGGAATTGAATCCCAACTACTTAGTTTAACTAACTACT TAATTGGGCCATTGTATTGGACCGTAGTCTGTTAGCAGTTTGTTACATGTTAAAAAGTAGAGTGTTAATGCAGAAAAGAG GATTCATTTAGTTGTATTCTGTTTTTTTGGAGAGGACTGGCCTCTCGAAAGACAGGTGTAACCATTCTGTTTCAGTTTCT ACTTTCTCTGTAATTCTTCATTGAACTAGGTGTCTTCTCCACAATGGTGTAAGGGAAACCTGGAATTGCCCAATAAAATT TTAGTTTCTTTCTCCCTATTCTGATCCAGTTCTATCATGCTTCTATACTTTGCTTCGCAACGCTAATTGCATTTCCTGTT TGTGAAATGCATGCTTCCAGTGTGACGTGTGCTAATTAAATTGAGTTATTGTGCTTGATGTATAGGTTTAGCCACCTGCA TCAACTGTTTGCTGAATTTGGAAATTTTCATTTGCTCTGCAGGGAATCCATATTGTTCTGACTTAGAGCTGACAACAGTA ATGTGCACATTACTTGAAGATATAAAACGTTGTTTATTATCACAACCGAAGAGCAACACCAACCACACTCAGTGTCCAAT TGATTTCACAGTACCTTATCATGTACGAGACACAACCAATTGGTGCAGTTTCTTATGTCGCCCGACCAATCATACCGCCT TGCTTACCAATCCACTGCAATCTTGCTCTAGTTCCCTTCAGATGGGTTGCTGAAGCCCAAAGTGCCTTAATACCTTGAGG TTTTGCATTCTGATTTGTACTATTAAAAAATCCTAAATCTAAAAAAAACTCAGTGTATGTTTGGATTTTCATTGAGTTCA ATGTTGATCCACATAGTGACAGAGTTTTGCTTCTCTTTTTTTTTTTGGTCAAAAGAGTTTTGCTTCTCTATTGATACGTT AAGATTTTATTTTCCCACACTAGCTTAGCTTATTGCATGGCCTGTTCACTATGGGAAAAATGTATAAGGGTTGTGGTCCC ATGGGGTGTTGCATCCATGAGGCCCATCGAAATATTTGAATGAATGCATATGCTAGCAAAATGTGAAATATAAAATTGAT GTACGTGATTTTTTTTAAAGTGAATTCCTATTAACGTG
CDS sequence (LotjaGi3g1v0120200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCTTCAACACACACCCCTGACATGGTCCTCTTCCATCTCCTACACACCACCGCTAACCCATTCAACGAACCAGAA CCGCCGCAACTTACCACCAACGCCACCTCTTCCTTTCCGCGTCCAGTCGTTGAAGCGGTCCTCTAAGCCGGCGTCTGAGG GGCTCCAGAAGGACCCCAAGAAGGCCCTGTCTCGCATTCTCCGAACCGAAGCGGCTATCAAAGGCGTCGAGAATAAGTCT AAGGCGTGGAAGCACCAGCGGACACAGCTTTGGCCTAAGGCTGTTCTTGAAGCATTGGATGAGGCCATTAATGCGTCTCA ATGGCAGTCTGCTCTCAAGGTTTTTGCACTTCTTCGTAAGCAACTCTGGTATGAACCGAGAAGCCAAACATATACAAAAC TGTTGATGATGCTTAGCAAATGCAAGCAGCCTGAAGAGGCTGGTTATCTCTTTGAGATCATGTTATCTGAAGGGGTTAAA CCTACTGTTGATGTCTTTACTGCTCTCGTAAGTGCTTATGGTCAAAGTGGTCTGTTTGACCAGGCACTTTCTACTATTGA AGATATGAAAGCAGTTGTTGACTGTGAACCAGATGTATATACATATTCTGTTCTTATCAGCTGCTGTGCGAAATTTCATC GTTTTGATTTAGTCGAACACATTCTTGCAGATATGCGATATCTGAACATTGAATGTAACCATGTGACATATAATTCTATT ATTGACGGATATGGTAAGGCTGGCATGTTTGAACAAATGGAGAACTCATTGATAGATATGATTGAAAATGGCAACTGCAG TCCGGATGTTTTCACGCTGAATTCTTTTATTGGATCTTATGGAAATGGTGGGCAAATTGATAAGATGAAGAAGTGGTATG ATGAATTTCAGCTAATGGGCATAAAGCCAGACATTAAGACTTTCAATATGATGATAAAGTCCTTTGGCAAAGCAGGCATG TATGAGAAGATGGAGTCTGTGATAGATTTCATGAAGAGCAGGTTTTTCACTCCCACAACTGTAACATATAATACTGTCAT TGAGGTGTATGGCAAAGCTGGAGAAATAGAGAAGATGAATAACTATTTTAAGAAAATGAAGCATATAGGAATGAAGCCTA ACTCTGTAACTTATTGCTCACTTGTCAATGCATATAGCAAAGCTGGTCGTATTGACAAAGTTGACTCAATCATGAGGCAT GTAGAAAATTCTGATGCAGTATTGGATACTCCTTTCTTTAATTGCATAATCAATGCATATGGTCAGGCTGGTGACATAAA TAAGATGGGTGAATTATTCCTGGCAATGAGAGAAAGAAAATGTGAGCCTGATAGCATCACTTTTGCTTGTATGATCCGGG CTTACAATACCCAAGGGATGACTGAGGCTGCTAAAAAGTTGGAAACAATGATGATTGCTAGCAAGGATAGCTATGATGCT AAGTTGATTGGATGCTAG
Protein sequence (LotjaGi3g1v0120200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELQHTPLTWSSSISYTPPLTHSTNQNRRNLPPTPPLPFRVQSLKRSSKPASEGLQKDPKKALSRILRTEAAIKGVENKS KAWKHQRTQLWPKAVLEALDEAINASQWQSALKVFALLRKQLWYEPRSQTYTKLLMMLSKCKQPEEAGYLFEIMLSEGVK PTVDVFTALVSAYGQSGLFDQALSTIEDMKAVVDCEPDVYTYSVLISCCAKFHRFDLVEHILADMRYLNIECNHVTYNSI IDGYGKAGMFEQMENSLIDMIENGNCSPDVFTLNSFIGSYGNGGQIDKMKKWYDEFQLMGIKPDIKTFNMMIKSFGKAGM YEKMESVIDFMKSRFFTPTTVTYNTVIEVYGKAGEIEKMNNYFKKMKHIGMKPNSVTYCSLVNAYSKAGRIDKVDSIMRH VENSDAVLDTPFFNCIINAYGQAGDINKMGELFLAMRERKCEPDSITFACMIRAYNTQGMTEAAKKLETMMIASKDSYDA KLIGC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 14 | 60 | 47 | - | – | |
| MobiDBLite | 14 | 30 | 17 | - | – | |
| Gene3D | 93 | 259 | 167 | 3.3E-37 | ||
| PANTHER | 104 | 252 | 149 | 1.2E-110 | – | |
| ProSiteProfiles | 127 | 161 | 35 | 10.095 | ||
| TIGRFAM | 130 | 163 | 34 | 1.7E-4 | ||
| Pfam | 130 | 159 | 30 | 0.0091 | ||
| Pfam | 161 | 211 | 51 | 2.1E-10 | ||
| ProSiteProfiles | 162 | 192 | 31 | 8.035 | ||
| TIGRFAM | 165 | 199 | 35 | 8.6E-5 | ||
| PANTHER | 195 | 329 | 135 | 1.2E-110 | – | |
| ProSiteProfiles | 198 | 232 | 35 | 9.208 | ||
| TIGRFAM | 200 | 226 | 27 | 0.0024 | ||
| ProSiteProfiles | 233 | 267 | 35 | 10.194 | ||
| TIGRFAM | 235 | 270 | 36 | 2.0E-6 | ||
| Pfam | 235 | 264 | 30 | 4.1E-6 | ||
| PANTHER | 257 | 404 | 148 | 1.2E-110 | – | |
| Gene3D | 260 | 366 | 107 | 9.2E-27 | ||
| Pfam | 268 | 316 | 49 | 3.3E-9 | ||
| ProSiteProfiles | 269 | 303 | 35 | 10.084 | ||
| TIGRFAM | 271 | 305 | 35 | 7.3E-6 | ||
| ProSiteProfiles | 304 | 338 | 35 | 10.83 | ||
| TIGRFAM | 307 | 339 | 33 | 8.3E-8 | ||
| PANTHER | 332 | 467 | 136 | 1.2E-110 | – | |
| Pfam | 338 | 387 | 50 | 4.9E-12 | ||
| ProSiteProfiles | 339 | 373 | 35 | 11.63 | ||
| TIGRFAM | 341 | 374 | 34 | 2.1E-7 | ||
| Gene3D | 367 | 484 | 118 | 4.1E-25 | ||
| ProSiteProfiles | 374 | 408 | 35 | 9.438 | ||
| TIGRFAM | 376 | 407 | 32 | 1.5E-4 | ||
| ProSiteProfiles | 409 | 443 | 35 | 10.6 | ||
| Pfam | 410 | 455 | 46 | 3.7E-10 | ||
| TIGRFAM | 413 | 445 | 33 | 5.6E-8 | ||
| ProSiteProfiles | 444 | 474 | 31 | 7.366 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0120200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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