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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0137700 |
| Transcript ID | LotjaGi3g1v0137700.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidylprolyl isomerase; TAIR: AT1G56090.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q15785|TOM34_HUMAN Mitochondrial import receptor subunit TOM34; TrEMBL-Plants: tr|I1KU07|I1KU07_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0137700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:17879221..17881974) extracted from Lotus japonicus Gifu genome v1.2.
CACCTAATTGTTTTCTTTAAGAAATTGAAAGAAAGAGGCAAACGCGCGTTTCAATCAAGAGCGCAATTATTGGTCAAAAC GCTTCCATCATCGTCTTGTTCTTTCGTTCCATTCTCTGTCACTGAGCTGAACTATAAATTTCAAGCCATTTCAAACTCTG TTTCTGCAATTCGAATCGCGATTTCAACTGTTTTGATTTTCGAATTCGAAGATGGCGACGTCGAACAAGATCGAACGCGG TCACCAGATGTACCGTGACGGACGATACAGCGAGGCGTTAGGGTTTTACACGGAGGCGATCGCCATGGCCAAGACCAATC CTCAGAAGATCGCTTTGCATAGCAATCGTGCTGCTTGCTTCCTCAAGCTTCACCATTTCAACAAGGTTCCCTTTCTTCTT GTTCCTAACGAATTTGAATTTTATGATTCTGCTATTTTCTAAATTATAGAAATATTAGGTTATTTGAGTAGTGTGCTTGA GAGGGATGAACTGTTTGATTATTTAAAGTGTGTTGGAAATTGATCAGAATTCTGATTTTGACTGTCTGAATATGTCTGCT GGGTCATTGGTTAGCTGATGGGTAACTAATAATCAGTTGCCCTAGGTGTGAGGGGGCGTGTTAGAAGTCTCACATTGACT AGAGATTTGACATAGATAGCCTTTATAAAGGGTAGAGTAACGCTCAACTCTTGAGCTTGTTTTAGGTTGAGTTAGGCCTC CCAAATTCTAATAGAATTGGCTTGTGAACTTGCTTGCGACTACGGAGATTTACTAAATTGACAGTGCTGTTTCCTTCTCT TGTGAATTCTTGATGGTGTTCTTTAGTTATGCCCTTTTGTTATAAATTGTGTACCACAATGGTTAGGATTTATTTTTTGG GTTTGAGACCTACGGTTTGAGCGTTAAATTAACTGAAAGAGGGTGAAACATTTGTTACGATTTCAATATTTTGAAATGAT GCCTGTTCTTGTCCTGCTCTCTGCACTTGTCTAGTTGCATGCTTTTGATGAATGATTTCCAGTTTAAATACTTATTTTCT AGGATGCAATCATTTATTGTCACTACCATTTCAGGCAGCAGAAGAGTGCACCTCAGTGCTTGAGCTTGATCACGAGCACA GTGGAGCTTTGATGCTGCGAGCTCAAACACTGGTGACCTTGAAGGAGTACCATTCAGCACTTTTCGATGTCAATAGACTC TTGGAATTGAATCCAGACTCAGAGGTCTATCAAAATCTTCACGCCCGCTTGAAGACACAGTTGGTAAGGCGTTATCCCAT ATGTTTTCATTGCAGTTGCATAAATTGAGCAAGTTATGGGATTATGTTTGACTGATTATTGTTGTTGTTCTTGTTCCAGA TAATAAATAAAAACCATATGTTAGCAATAAAGAGTTGGATTTAATGTGTGTGTGTGTGTGTGTTTGAAGTTAGTGGACAA AGAAGATAGGTTACACAAACCTTTCAAATTTGGCCAAGATTTTTTATTTCATGATTAATTTGCTTTGTGAACTTGTAATA AGAAATATTGTTTCTGTTCTTTTTTCCCCCTTGCTTAAGGAAAGTCACTTGCTCCAATACCAGAGTCAGAAGAGGAGTTT GAAGAACAAGGAGATGAGGAGGCTGAGCTGATGCTAAATAGAGATAATAAGAAGAAAGAGATGTTTGCTGCAACTTCTAA TATTAGGATTGATCAAAAGGATGAGCTTGGAAAAAGTTTTATCGGTTCTGAGTGTGCTCCTCAGGAAATAGACCAAAATT CTTCATTTAAACAAGAAAGGGACCAAAACTATGAACCTAAAATGACCACAGTGGAAGTTACGGTTCCTAAAGCACCAAGC AAAGAATCAACTGAGAAGCAGTCCGAAGGATGGCAAACAATTCCAAAACCTAAAGGACATTCTACTCTAGACTACGCACG GTGGGACAATGTTGAAGATGATTCTAGTGAAGAAGAAGATGATGATGATGATGAAGATGAAGAATCTTTGCCCCAATACC GGTTTCGTGTGAAAACAGTTGGTGTGCGTCCTGTGAAGTGAGGATATTCGTATACTACGGTACCCTTAAATGGCTGGTTT GATACCATAGTGAATGTAAAAAGTGACATCGACAGGCAAGAATTGACTGAATAGAATCACTTGGTTGGTTGAATCAGAGG GAAGTGCTGTATTTTATCCATTGGTTTGGTTGTCAATGTTCATGAATCATAGGGAACTACTGTATTTTATCCATTGTTTT GGTTGTCAATGTTCATGAACACTAAATCAACCTGTTTCAAGCTGCTACCGTCCGATATCCAGCCGGTTTGCATCTTGTGT GAGAAAATCTAAGTGTTCAAGTTTCGTATTGGTCCAGAAATATAGGGAGAGTTTTTATCTGATGTGGCCCATACAACATG ACCAATATCAACATGAACTATATATTGAATGGGAATTTCCTGAAGCTTAGTTACTGCAGAAAAATTGATGATAAGGTTGC AGTTGTGAGAAATCTAGTCATTCAATTGTAACAATGGACCTGTGATTTGTCCTCTCCTCTTTGTATGATTCAGAAAAATT GATGATAAGGTTGCAGTTGTGAGAAATCTAGTCATTCAATTGTAACAATGGACCTGTGATTTGTCCTCTCCTCTTTGTGC CAACGCACCACTCTAATGGTGGAAGTTAGCAGAACAAATTAGGCCTAGTTTGAGCATTAAGCAACAAGATAAAGCTTGGT TCCATTTTACACAGAAATATCTCTTTAATTTCAT
CDS sequence (LotjaGi3g1v0137700.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTTCCAGTTTAAATACTTATTTTCTAGGATGCAATCATTTATTGTCACTACCATTTCAGGCAGCAGAAGAGTGCAC CTCAGTGCTTGAGCTTGATCACGAGCACAGTGGAGCTTTGATGCTGCGAGCTCAAACACTGGTGACCTTGAAGGAGTACC ATTCAGCACTTTTCGATGTCAATAGACTCTTGGAATTGAATCCAGACTCAGAGGTCTATCAAAATCTTCACGCCCGCTTG AAGACACAGTTGTCACTTGCTCCAATACCAGAGTCAGAAGAGGAGTTTGAAGAACAAGGAGATGAGGAGGCTGAGCTGAT GCTAAATAGAGATAATAAGAAGAAAGAGATGTTTGCTGCAACTTCTAATATTAGGATTGATCAAAAGGATGAGCTTGGAA AAAGTTTTATCGGTTCTGAGTGTGCTCCTCAGGAAATAGACCAAAATTCTTCATTTAAACAAGAAAGGGACCAAAACTAT GAACCTAAAATGACCACAGTGGAAGTTACGGTTCCTAAAGCACCAAGCAAAGAATCAACTGAGAAGCAGTCCGAAGGATG GCAAACAATTCCAAAACCTAAAGGACATTCTACTCTAGACTACGCACGGTGGGACAATGTTGAAGATGATTCTAGTGAAG AAGAAGATGATGATGATGATGAAGATGAAGAATCTTTGCCCCAATACCGGTTTCGTGTGAAAACAGTTGGTGTGCGTCCT GTGAAGTGA
Protein sequence (LotjaGi3g1v0137700.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MISSLNTYFLGCNHLLSLPFQAAEECTSVLELDHEHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPDSEVYQNLHARL KTQLSLAPIPESEEEFEEQGDEEAELMLNRDNKKKEMFAATSNIRIDQKDELGKSFIGSECAPQEIDQNSSFKQERDQNY EPKMTTVEVTVPKAPSKESTEKQSEGWQTIPKPKGHSTLDYARWDNVEDDSSEEEDDDDDEDEESLPQYRFRVKTVGVRP VK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 11 | 117 | 107 | 1.5E-12 | ||
| SUPERFAMILY | 19 | 84 | 66 | 6.56E-9 | ||
| PANTHER | 21 | 242 | 222 | 5.9E-88 | – | |
| MobiDBLite | 139 | 231 | 93 | - | – | |
| MobiDBLite | 172 | 191 | 20 | - | – | |
| MobiDBLite | 207 | 224 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0137700.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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