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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0145200 |
| Transcript ID | LotjaGi3g1v0145200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT3G14400.1 ubiquitin-specific protease 25; Swiss-Prot: sp|Q9FPS2|UBP25_ARATH Ubiquitin carboxyl-terminal hydrolase 25; TrEMBL-Plants: tr|I1KU89|I1KU89_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0145200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:19313281..19322992) extracted from Lotus japonicus Gifu genome v1.2.
GTCGCTTCCTGTTCTGTTGTTTTGTTCGTTTCTCACTCTGCTGCTTACTCACTCGTACAACTTCTCATTTTCTTTTTCCC TGTTTGGATAATATTAAGAAGGTCCTAGAACAAATAAAAAAAGAGTAAAAAAAAGAAAAAACAAATCAGCACCAAATCAA AGAGAGGGAAAGAAAACAAGTGAAAACCGAGCCTGGAGCGAGAGCGCGCGCGATGCGATGCGATTGCGGTGGTGGCGGCG GCGGTCATCGTTGTTGAGGTCCCTTTCACCGGCCAATGCACCGTCGTGTCACGGCGGTTATCTCGGTTGCCGCCGGCGTT GATGGCCCTGCAGATGTCCTGGCAGCCGAATCTCCTGAGTCAGAAGCGCAAAACCGGTGCTCCTCCCTTAGGTCTCCGTA ACCTCGGCAACTCCTGCTACCTCAACAGCGTTCTCCAGTGCCTCACCTACACTCCTCCTCTCGCCAATTTCTGCCTCCGT TTCCAACACTCTTCTCTCTGTAACCACCACCATTCAATTTCACCTTCAATTTCAATTTCAATTTCCCCCCTAATTTCTTT GCCCTAACCCTAATTTTCATTGTTTCAGGTGATTCTTCTGCTTCTTCCTCGTGCCCGTTCTGCATACTCGAGAAGCAGAT TGCGCGTTCTCTCAAGTTAGATCTCGCGCACGACGCTCCTGCCAAGATTCAGAGCTGTCTCCGGATCTTCGCTGAGCATT TCCGCTGTGGTCGTCAGGAGGACGCGCACGAGTTCCTCCGCTACGTTATTGACGCCTGCCATAACACCTGCCTCCGCCTC AAGAAGCTTCGCCGGAAAGGGGGTGGTGGTGGTGACAGTGGAGGGTCTGTGGTGAAGGATATCTTTGGGGGTGCCTTGCA GAGCCAGGTGAAGTGTCTCTGCTGCGGGTACGAGTCGAATAAGGTTGATGAGATGATGGATATCAGTCTAGATGTTTTTC ATAGTAACTCGCTTAGGGACTCTATGCAGAAATTCTTTCAGCCTGAGGTTTTAGATGGCAACAATAAGTACAAGTGTGAT GGGTGAGTGAGTGAGTGAGTGTGTGTTTTCGATTTCGCTTTTTTTGTTGTTGAAAATTTTATTGAATGATTGAACTTGTG GGTGTTGTGTTATTCAGCTGTAAGAAGTTGGTGGCAGCTAAAAAGCAGATGTCTATACTTCAAGCGCCTAATATCCTCGT GATACAGCTCAAGGTTGGATATGTTTGGTTTTCGTTTTTCGTTGGTTATTTGGATTTGTGGTGAATTAGGTGTGTTTTTT CTTATTTGTTTATTATTGCATGGTGTTATATTGCTGGATTTTGGGTTGCAGAGGTTTGAGGGCATATTGGGTGGCAAGAT CGATAAGGCTGTTGCATTTGAAGAAGTTTTGGTGCTTTCTAGCTTCATGTGCAAAGCAAGCCAGGTATGTTTGGTGTTCG TTTTGTACTCGTTACTTTGAAGGGGTGTGTCTGTTTGGTGCTTTCCAGATTCATGTCTGTTGACATCCACTGATATTTGT GACTAGTTCTTCGTGTGTGTGGAGGGGGGGTGAATTCTCTGCAAGATTTGCGTTGTTTTTTGTGCTAAATTTGTTTCATT AAGCTGGCATGGCCGATTTACAGTTTTCCTGTCAATACAATGTACTGTTGTTTTTATTATAAAAAAGAAATTCATAAGAA ATAAAGAGAGATCCAAAAAGAGGAAGATAATATGTTCCCCACCAGTAATCTAAAGGGAAAAAAAATATACACAATGATTG GCAGCTAACTTTTGACTATTTTTTGTATTTGTACGCAGATGGTAGGCTTGTTAGGCTATTCTGTTCTTAGGAGATGAAGA AAACACATTTGTTGGATATGTTTTAGGTTAATTGGGAAATAACTCAGGGTGAATTGTGGCTTTGGGATTTATTATCACAT GAGTTTGGTCTAAAATATTATTTTTTAATAGCTGGGAGGTTACAAATCTAAGAGAATATGACACGGAAAGATTTCTGGAC CTCTACTTTAAGTGCATTTGCTGTTTACTTTTTAAGTCTGTCGATGTAGTTTGCTTTGAGTGCGGGGTGTACTTCGGCAA CCTGATGTAGTAAAGGAAAAAAAGATCCTTTTAAGGGCTTTTTAACAGAAATCTTGTATTGATGACTCAGATAGTTGTCA AATTATCATGATTTGAAGAAGAGTTAGTTGGTGGAAGGTGATCATTAATCAGGTTTTTAAACTCTGTATACTAGATTGGA GATCTTGGCTACTTTCTGAAATATTGCTGTATTGCTACTGAGCTTTATTGCTGCTTGCTGTATTTGTTGCATTTGGTTGG ACTTGAATGCTCAGGTTTAAAGAAGAAATTTTTATCATAGCAGATCTTTTGTAGGATATGATTACTATAATGGCTTCAGT TTGGTGATTTTTGATGAACATGTGGAGGTATTTAAAAGCAATATTTCATGGGCGAACCTCTCTAAGTCACAGTAAAGCAC TAAGTTTGCAATATTCAGCGGCTTGTAATCTATGAGAAGTATGAAGATCATCAATCATAGATTCCATGAATCCATAATGA GCTCTAAATATTTTTTTATCTTATCCAAGTCTGGTTTTCTTTGTTTAACCCCAGTTCGTATTGAAATTATTGTGTAAAAT AGAAGGTGAGCTTTGCTTGTGAGATGTTGAAAAACTGGCTATATATAAAGGTGAACTGGCTGGTGAGACGTCGAAAAACT GGGCTACACATAAAAAGCTTTCAACCTCTTTCACGCACTTGACCCTATGGGACATAAAGTATCCCATATCCATTAAATGT ACAAAGTCATACATGCTTTTATTTAATCTTCAAAGGGTAGCTCGGTTAGGACTTAAAACTAAATGGTGAGGCTTAGGGGC TAAGCTATATCATTTAACCAATCACAATAAAAAGCATAAATTGCTTGGTGAATTATAATGGTAGTTAAGTATTTTTCCTA TGTTGGCTGGCGTTTTTGCCAGACTGTTTATATGGCCAATATTGCTTACTTCTTTTGCTCCCCATTCTAATATTATATTT ACCTTCCTTTCTAACATTTGTGTTTATGTAGGATCCACAACCAGAATACAAGCTCTTTGGAACTATTGTGCATTCAGGTT ACTCCCCTGAATCTGGTCACTATTATGCGTATATTAAGGTTTGTAACTTTATATTCCATATGTACACAATATATGTAGCC TATTCATTGATTCCCTAATCATTTCTGATTAAGCCCCGAATTTGATTTCCTATTCTTTTCACAGGATGCAATGGGTCGGT GGTATTGCTGTGATGATTCTTGTGTAACAGGTGCAACCCTGCAAGATGTTTTGTCAGAAAAAGTTTATATTCTTTTTTTC TCTCGGACTAACCCAAAGCCAGTGTCAATTAGTAAATCTCTTGCGTCAAACGGTGTAAAGCCTCATCATTCCAATGGGAG TCAGGCATCTGAATGCCCAAAGGTTGATGTACCACTGAAAACAGTGCATGCAAAATTGAATTCTGAGCAGTCTCCTCAGA AAGATATGCTGAGTGTATCTAAAATTGGTAAAGGGCCGTCAAGCTCACGAGTGAAGTTTGACATTAATGGTAGTTCTACT TCTATTTCCAAGAAGAGTCCCGCTCCTGCAAGTGTCAATGGGAAAGTTGACTTCTCTAGGAATAATCAGCCCTTAGTAAT AAATGGGCATGCGAAGGACTCAGTTTCATTAGAGAATGGTAAGAAAGATCCTTCGTCATTACCCATTGGAAATGGCTTTG ACAAAAATAAACCTGACGTTGTTAAGAGCTCGAAAAGGAAGGAGTCAACAATGGCAAATGGACACAATAATGTTCAGACA GTTGATACCCATACTGTAAAACCAGATCCTACAGAAAGTACTGATAGAAACAAAGAAATAACAGGTAGAGGGCCTGACAA CTGTAAGCATGAAAGCAATGGCGTCAACGGTGTGCCAAACATATTGGGGAATAAGAGAAAGGTGCTTGAGGCTTCATGCA TTTTGCTTGCACATGATGCTCAGTCTCGAGCAAGAGTTCAAGAACTGAAGGACATGTATGCTATCTAAAACTCTATCATT TTTTAATTACTTTACCAATTTTAGTTAATGGTTACCGTTAAATGACAATTTATGTTTTTATTGATGTCTAGCTATGCTTT GGTAGTTGGTGCAGACTGTTAAAACTATTTAATGCTTGACATTGTGTTTTTGAAGTCTTAGTTCTGTTAAGGCTTTGATA TTTGTTATTGTCTGGATAACCTTATGCTATCTATAATGTTAGTTGATGCTACCGAATAATTCTTTTTCTCCATGTTTCCT ACTTTATCTCTTAATTTCCTTCTCTTCCATTCAATTACTCACATGCTAAAATATGTTGTTGAATTTTCAGTATATCTTAG TCTTGTTGAATCATTCTGTTAAAACAATTTAATGCTGGACATTGTATTTCTGAAGGCTTAGTTTTGTTACGGCTTTTGTT ATTTGTTATTTTCTGGATAACCTAATTGGCGGGGGAGGCAATACTAGAATCTGATACATGTATTTTGGTATTCAAATTTC AAAGCACTTGGCCTTTTCAATCCAAAGGAAACATTATGCAATCTATATTGTTGTGGAGGATGCTGCCCAATAATTCTTTT TCTCTCCATGTTTCTTACTTTATCTGTTAATTTCCTTCTCTCCATTCAATTACTCACTTGCTAAAATGTTGTTGATGTTT TAAATTTTCAGTGCATCATAGTCTTGTTGAATCATTCTGTTAAAGCTATTTAATGCTGGACATTGTGTTTTTGAAGTCTT AGTTTTGTTAAGGCTTTGATATTTGTTATTTTCTGGATAACCTTATTGGCGGGGGAGGGAATACTAGAATCTGATACATG TATTTTGGCATTCAAAGCACTTAGCCTTTTCAATCCAAAGGAAACATTATGCAATCTATATTGTTGTGGAGGACGGTGCC CAGTAATTCTTTTCCTTTCCATGTTTCCTAGTTTATCTCTTAATTTCATTCTCTCTCCATTCAATTACTCACATGCTAAA ATACATTGATGTTATTAATTTTCAGTATATCTTAGTCTTGTTGAATCATTCTGTATTGAAATCCTAAAGCTTGTTATATC TTTTCCTTGCCTAAAATTGTTTTTGCACTTGTTCACATGTATTTACCCATGTCTTATTCCTTTTGCAATCAGTTTGAAAC CCTTACCTTCTGAAATATTCATTATGTGTCTGATTCTGATACTTTTCTCTTCTGTGCCTGATACTGATGATGTGTTTTCT AAATCATTACTCAGTCTTGGGAAAGAGGCAAAGTCAGTTTTAAGGTCATGTGGCTGGACAGATATGGTCTATGACTACTT GCGTTCTCAAAAAAGGTTACGAGCACAAGAAGCTGGAAATTTAACGAGTGGAGATGAAACAAGGTAAGTTTAATCATTTA GTTTTATGCATCATCCAGCCCTTAATATTACACAATACATATCTGTTGAACCGTTACGTGAATATCATCTACTGTTTTCA CTATTACTTTATAAGTATGTTAGAGTTTGATTTTAACCTATGATTATAGATACCAGGTGGAGGGCTGTAGTGTTCTGAAA TAACGCTTATACATACTATCTTGAAAATGTTGTCAAATAATTGCTATGCGATGGTGGTTTCCAGCAAAATGGCATTATAT AATGATGGGGTTGTGGGTTTAGCTACAGTCTACAGCAACTGCTTTTGCCATTGCAAGTGTGGCAGATAAAGCATAGTTAA ATCTATCTTTCTAATGAAGAGTGACTGTTTATTGATCATTCGACATGTTTTAAATAATGGAACTCTTGTGTTTGGGAAAA ATAGCTGATAACTAAAAAACTAATTTTTGGCTGAGCTGAAAGCTTTTCATCTAGCTAATTGAACTAGAAGTGTTTGATAA AATTAACTATTGAAAATTGAAGTCTCTTTTGGATGTGATTAACCTAGGCTGATAAAGGTAAAATGACATAAAAGGACATG TTTATTAGTATTGTCACATTGCACTGTAGTGGGGCATACGGGACCTGGCTGATCTGGGTTACTGTGTAGCATCACAGTTT ATTTAGTGACTGTCGTGGCGGAAATAGTGTGGTTTTTTGCCACTATTCAGTGGGACTGATGAAAACATAAATAATGCTGC TAGAAAGTTAATGTGACAGTATTTTTTAGGGATATTTTAGGACTTTTGCTCCAGAAACATTCCATTGAGGGCTTGGTTTG ACAAAACCCTTGCTCCTTTACACCTTCATTTTTTTGTCCCCGCTGACCCATTGAATGACTAAGCTGTAGTCAAAGTCATA AAAAGTACAAAAACCAAAGCCTTCTCCCATTAGGTGATGTCAGCTACAAGAATCAAATCGTGCCATCATATCCTATCATG AATCACATCTAATGATGATAAGATTATCCTTGGTATTCCTCTTTCGTTAACTATTAGAGTATCCTCCATCCTAAGGCAAG ACTATCATTTTCCACCTTGGTGCCATCCTAACTTATTTTCTGTAGATTTCATTTTTAGTCTCATGCGGTCTTTTGGGACA AGTTGATCATTATAACATTCCCATCTCTGCAACACTAAGTCCACTCTAATTGGTTCTTCATTGCATAACATTTAGTCTCT GAGGGGTACTTTTGTCATAAACTAAACATGAAGCATGCCTTCATTTCCCTTAACCTGCTTGAATCCTATGATTTACCTTC CTCTATTTTCTCATCATTATGATGGACCCTAAATATTTTAACCATGGTAGAATCAGTGTAACCAAATAGTGGTTATAGCG TGCCGGAAGTTCACTCTGCCGTGACATCGCGGAAAATGCGTTAAGCAATATGGCGGCTGTGATGGAGGATAGCGGTGCAA CAATCGTAGCAGTAACATAAGTTTATAGGGTTTTTTTAAAGTAGAAACCTCTTGAACGGTGAGCCACCGCTTGAATCATT AATTCCACATGGGCATTAATTCCTGTAAGACTTCATGAGCAAGGAATTCGGCCACAGCTCTTCATTTACGCACAAGTGAG AAACTCAGTCTCTTGTGTTCTCCCTTCTTTCTTCCTTTTTCGACATTGACCTTGTGCCCTTCTTCTCCAGCAACTCTAGG GAGCTTCTCCAACCACACTTTCCGGCAACTCTGTTCTGCTGTTTTTTTTAACACTTCTCTCTTGTTGCTATTTTGTTTAG TTCTTCCTTCATATTCTTTTTATTCACATGTTTCTTCTTTTCCTTTTATTTTTTTCCTTTCTTCCTTCACGTTTTCACTT TTCACCCTCTGTTTCTGTTTTCACTCTGGTTCTGTTTTGTAGTTTTCAGTTTTCCTTCCTTCTGTTCCTCTTCTTTTTCT CAACTTGTTTTTTTCTCTTTTAAAACTTCTAGCAGCATGGCTGAACAAGCTTCAAATTCAACCCATGCTGTTTTACTTGT TTTCTGTCTAATATCTTTATGTTTCATCATCCTTCCTTCTGATTTTTATTTGCACTACACAAGCCGTTTTTTATATAATT TTTTACTTATTTTAACTGCTATGCGTCTTTCACTATTTGCCTGCGGCGCTACCTGCTATTTGAAATAGTGGACGTTTTGT CAGAAGTTACTATCTATATCTAATGAGGAAAGTACTTTTTTTTTTAAAAAAATATTATAACTTTTGAGCATGTTTTATGT TCTAGGAACCTTTTTTCTTAAAAACCATGAACAAACAGGACTTGATTCTAAACCATTGATGATATTCCTGTTCGAGATAA TGTAAAAACTTATTGTTTGATTTTTTGTTTTTGTTTTTCGGGTGATAAGAATGATACTGTCAACTAGGCATCTTTGGTAA TTAAGTCATCATGATGACTGGGTTTGAGCATCAATTTCCCTAAAATGGAGTGGTCCAATATTATTCATTGGCACACTTTC CTCTACAACTTAACATTTTAGTCTGTTAGCTCTATAAACTTACTGCATGAGCACGTGTCCATATGGTGTGTTTATGCTTG CAGAAACGAACAGACAAAAAATGGGTCCTAAATATGCATTGTCCAAGGCCTGGGCATAACTACTGTATTTAGCTAGTTTG TTAGTACTTTGGAGTATGTGGGCAGTGGTTTGCATTTACCTTTCCCACTTTTCTTTTTAATGATTGCATGTCCATTTATG GTCGTCATAATGTGACTTTTGCCATGACAACTCAGCTTTTTCCAATAGCCACTGCATTATGCTGATGGGATATATAGTTT CAATTCTTAAAATTGGAAAAAGGAAGAAACTAAGTTGCTGAAATCTTTGTTTTAATTTAATGCACGATTTCTTGTAGTGT TATTTCATTGTCTTTCTTCTTTGTGGGTACATAGTGCTATTTCTTTAATAATTTTATGGACTATGTTGATTGCGATTTTA CTCCTACTGGTTATTCCCTGACATGATATGCATTACATGCGATGCAGGAAGTTGTTAATAAAAGATGCCCAAGGTGCTTT CATATCTCAGATTCCTGAGTCATTAAGAAAGGATCTGATTGAACGGCTCCGAACATTTAGCCAAGAAAAAGTCCAATTTG AAGGACCTTGACCTGATCAGGTATGAGGTGACCGATTGTTTTATTGTACTGATTTCCCATCCTTGCCTTCAATATTGATA GTGATTTATGAACCAAAAAGTCAGTGATTTGATAATTTTTTTTTTCCTTCCAATATGCTGCAGCATGTTCTGTCCTGCAA GTGAGGCTTAGTGTGTATACTCTGTATTACTAATTGTCGTAGGGATGGTGGTATTGTTTCATACTTACTCTTTGAGGTAG TGCTGGCGATTAACAGCAGGAGAATGTGGAGACTATCGTTAAAGTCCTCTCTGCGGTGGCTTTGTTTTGTTATGCCTTCC AGGAGCTCCATGCAGATTCGATATAGACGTTCAGATTTTATGTCTTGCCATGTTTTCTTTCTCCATGGAGGCTCTAAAGT ACTATGAATCGTGAGAAGAGCGTGTCAGGAATTCATTCCATTTTGTACAATCCGTTTTAGGCTTGTATTGGAGCAAAATC TTCTTTCTCTATAAAATTGCTCAACAAATTTTGCATCATAGATGAGGCTGTGGCTGTGGGATACATGCTATCAACAATCA CAATCCGGTATTAAATGAGAAATTCCTTCACTATGTTCATTTAGATCCTCAGAAGGATTTATGATTCAGTTTTGGTCACA GCAGCACCTGTATCGTTTTTGTATTCGTGATAACTATGGATAACAAATACTTTGGTAGACAACATTGCGTCAAAGTTTTC CATTGCACTGTTGCTGATGCTGCGCTTTAATGAATTAAAAAAGAGTAACTGTTTATTCAAATATGCCATCATTTAATGAG AATTTCACCTTTTTTGTTTTAGGCCAACGAAACAAAGTTTCATAAATAAAGACTCAAAGGACAAAGTCCATGTTACATCC AGATACTGGTCAGGTAACAGCCTGGTTTATCCGAAAAGAGAAAAAAGGGAGAATCTAAAGCCTCACCACCTTGGCTTCAC CATCCTTGTTCCAAAAATGCCTTTAGAATCAAACCTTAAATGCGGTATATATTTTTTCTAACGTGCCCCATTTAGAAAGC GGTCATAAAGTTGACCAAATGCAAACCTCAAACCTCATTCTTATTTGTGCGGCAATAAAAAAAATGCATTTTAGTTTGCG GAAGCAAAATATGGTGCTCGTGTAGATGCATG
CDS sequence (LotjaGi3g1v0145200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCCTGCAGATGTCCTGGCAGCCGAATCTCCTGAGTCAGAAGCGCAAAACCGGTGCTCCTCCCTTAGGTCTCCGTAA CCTCGGCAACTCCTGCTACCTCAACAGCGTTCTCCAGTGCCTCACCTACACTCCTCCTCTCGCCAATTTCTGCCTCCGTT TCCAACACTCTTCTCTCTGTGATTCTTCTGCTTCTTCCTCGTGCCCGTTCTGCATACTCGAGAAGCAGATTGCGCGTTCT CTCAAGTTAGATCTCGCGCACGACGCTCCTGCCAAGATTCAGAGCTGTCTCCGGATCTTCGCTGAGCATTTCCGCTGTGG TCGTCAGGAGGACGCGCACGAGTTCCTCCGCTACGTTATTGACGCCTGCCATAACACCTGCCTCCGCCTCAAGAAGCTTC GCCGGAAAGGGGGTGGTGGTGGTGACAGTGGAGGGTCTGTGGTGAAGGATATCTTTGGGGGTGCCTTGCAGAGCCAGGTG AAGTGTCTCTGCTGCGGGTACGAGTCGAATAAGGTTGATGAGATGATGGATATCAGTCTAGATGTTTTTCATAGTAACTC GCTTAGGGACTCTATGCAGAAATTCTTTCAGCCTGAGGTTTTAGATGGCAACAATAAGTACAAGTGTGATGGCTGTAAGA AGTTGGTGGCAGCTAAAAAGCAGATGTCTATACTTCAAGCGCCTAATATCCTCGTGATACAGCTCAAGAGGTTTGAGGGC ATATTGGGTGGCAAGATCGATAAGGCTGTTGCATTTGAAGAAGTTTTGGTGCTTTCTAGCTTCATGTGCAAAGCAAGCCA GGATCCACAACCAGAATACAAGCTCTTTGGAACTATTGTGCATTCAGGTTACTCCCCTGAATCTGGTCACTATTATGCGT ATATTAAGGATGCAATGGGTCGGTGGTATTGCTGTGATGATTCTTGTGTAACAGGTGCAACCCTGCAAGATGTTTTGTCA GAAAAAGTTTATATTCTTTTTTTCTCTCGGACTAACCCAAAGCCAGTGTCAATTAGTAAATCTCTTGCGTCAAACGGTGT AAAGCCTCATCATTCCAATGGGAGTCAGGCATCTGAATGCCCAAAGGTTGATGTACCACTGAAAACAGTGCATGCAAAAT TGAATTCTGAGCAGTCTCCTCAGAAAGATATGCTGAGTGTATCTAAAATTGGTAAAGGGCCGTCAAGCTCACGAGTGAAG TTTGACATTAATGGTAGTTCTACTTCTATTTCCAAGAAGAGTCCCGCTCCTGCAAGTGTCAATGGGAAAGTTGACTTCTC TAGGAATAATCAGCCCTTAGTAATAAATGGGCATGCGAAGGACTCAGTTTCATTAGAGAATGGTAAGAAAGATCCTTCGT CATTACCCATTGGAAATGGCTTTGACAAAAATAAACCTGACGTTGTTAAGAGCTCGAAAAGGAAGGAGTCAACAATGGCA AATGGACACAATAATGTTCAGACAGTTGATACCCATACTGTAAAACCAGATCCTACAGAAAGTACTGATAGAAACAAAGA AATAACAGGTAGAGGGCCTGACAACTGTAAGCATGAAAGCAATGGCGTCAACGGTGTGCCAAACATATTGGGGAATAAGA GAAAGGTGCTTGAGGCTTCATGCATTTTGCTTGCACATGATGCTCAGTCTCGAGCAAGAGTTCAAGAACTGAAGGACATT CTTGGGAAAGAGGCAAAGTCAGTTTTAAGGTCATGTGGCTGGACAGATATGGTCTATGACTACTTGCGTTCTCAAAAAAG GTTACGAGCACAAGAAGCTGGAAATTTAACGAGTGGAGATGAAACAAGGAAGTTGTTAATAAAAGATGCCCAAGGTGCTT TCATATCTCAGATTCCTGAGTCATTAAGAAAGGATCTGATTGAACGGCTCCGAACATTTAGCCAAGAAAAAGTCCAATTT GAAGGACCTTGA
Protein sequence (LotjaGi3g1v0145200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALQMSWQPNLLSQKRKTGAPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRFQHSSLCDSSASSSCPFCILEKQIARS LKLDLAHDAPAKIQSCLRIFAEHFRCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGGGDSGGSVVKDIFGGALQSQV KCLCCGYESNKVDEMMDISLDVFHSNSLRDSMQKFFQPEVLDGNNKYKCDGCKKLVAAKKQMSILQAPNILVIQLKRFEG ILGGKIDKAVAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCDDSCVTGATLQDVLS EKVYILFFSRTNPKPVSISKSLASNGVKPHHSNGSQASECPKVDVPLKTVHAKLNSEQSPQKDMLSVSKIGKGPSSSRVK FDINGSSTSISKKSPAPASVNGKVDFSRNNQPLVINGHAKDSVSLENGKKDPSSLPIGNGFDKNKPDVVKSSKRKESTMA NGHNNVQTVDTHTVKPDPTESTDRNKEITGRGPDNCKHESNGVNGVPNILGNKRKVLEASCILLAHDAQSRARVQELKDI LGKEAKSVLRSCGWTDMVYDYLRSQKRLRAQEAGNLTSGDETRKLLIKDAQGAFISQIPESLRKDLIERLRTFSQEKVQF EGP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 638 | 624 | 1.5E-120 | – | |
| PANTHER | 15 | 638 | 624 | 1.5E-120 | – | |
| Gene3D | 16 | 333 | 318 | 3.9E-90 | – | |
| SUPERFAMILY | 18 | 330 | 313 | 2.55E-90 | ||
| CDD | 22 | 329 | 308 | 4.0143E-141 | – | |
| ProSiteProfiles | 23 | 331 | 309 | 49.745 | ||
| Pfam | 24 | 328 | 305 | 4.2E-47 | ||
| ProSitePatterns | 24 | 39 | 16 | - | ||
| ProSitePatterns | 273 | 291 | 19 | - | ||
| MobiDBLite | 340 | 361 | 22 | - | – | |
| MobiDBLite | 340 | 359 | 20 | - | – | |
| MobiDBLite | 373 | 426 | 54 | - | – | |
| MobiDBLite | 373 | 416 | 44 | - | – | |
| MobiDBLite | 438 | 521 | 84 | - | – | |
| MobiDBLite | 478 | 495 | 18 | - | – | |
| MobiDBLite | 496 | 514 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein. | ||
| Biological process | Protein deubiquitination | The removal of one or more ubiquitin groups from a protein. | ||
| Molecular function | Thiol-dependent ubiquitinyl hydrolase activity | Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin. |
Expression pattern of LotjaGi3g1v0145200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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