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Ubiquitin specific protease (USP) domain signature 2.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein. | ||
Molecular function | Thiol-dependent ubiquitinyl hydrolase activity | Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cicer arietinum] gi|502154518|ref|XP_004509729.1| | 10 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cicer arietinum] gi|502154518|ref|XP_004509729.1| | 11 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cicer arietinum] gi|502154518|ref|XP_004509729.1| | 9 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cicer arietinum] gi|502154518|ref|XP_004509729.1| | 9 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cicer arietinum] gi|502154518|ref|XP_004509729.1| | 9 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Glycine max] gi|356540277|ref|XP_003538616.1| | 13 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 26-like [Glycine max] gi|356554385|ref|XP_003545527.1| | 14 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Glycine max] gi|356517211|ref|XP_003527282.1| | 29 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Glycine max] gi|356571884|ref|XP_003554101.1| | 17 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cicer arietinum] gi|502112202|ref|XP_004494262.1| | 16 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cicer arietinum] gi|502112202|ref|XP_004494262.1| | 11 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cicer arietinum] gi|502162504|ref|XP_004512524.1| | 11 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine max] gi|356525831|ref|XP_003531525.1| | 12 | ||
– | Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula] gi|357453291|ref|XP_003596922.1| | 16 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine max] gi|356543638|ref|XP_003540267.1| | 11 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like isoform X1 [Cicer arietinum] gi|502156184|ref|XP_004510348.1| | 20 | ||
– | Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula] gi|358349208|ref|XP_003638631.1| | 9 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine max] gi|356531617|ref|XP_003534373.1| | 11 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Glycine max] gi|356511141|ref|XP_003524288.1| | 13 | ||
– | 15 | |||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cicer arietinum] gi|502112202|ref|XP_004494262.1| | 16 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Cicer arietinum] gi|502116606|ref|XP_004495512.1| | 10 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cicer arietinum] gi|502140148|ref|XP_004504079.1| | 13 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like isoform X2 [Cicer arietinum] gi|502134175|ref|XP_004502026.1| | 25 | ||
– | PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cicer arietinum] gi|502154518|ref|XP_004509729.1| | 11 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 | 27 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 | 27 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 | 27 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 | 27 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT3G11910.1 ubiquitin-specific protease 13; Swiss-Prot: sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 | 27 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT3G11910.1 ubiquitin-specific protease 13; Swiss-Prot: sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 | 27 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 | 27 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT2G40930.1 ubiquitin-specific protease 5; Swiss-Prot: sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5; TrEMBL-Plants: tr|A0A151TAP6|A0A151TAP6_CAJCA Ubiquitin carboxyl-terminal hydrolase 5; Found in the gene: LotjaGi1g1v0657900 | 21 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT2G40930.1 ubiquitin-specific protease 5; Swiss-Prot: sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5; TrEMBL-Plants: tr|A0A151TAP6|A0A151TAP6_CAJCA Ubiquitin carboxyl-terminal hydrolase 5; Found in the gene: LotjaGi1g1v0657900 | 21 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT2G40930.1 ubiquitin-specific protease 5; Swiss-Prot: sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5; TrEMBL-Plants: tr|A0A151TAP6|A0A151TAP6_CAJCA Ubiquitin carboxyl-terminal hydrolase 5; Found in the gene: LotjaGi1g1v0657900 | 21 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT5G22030.1 ubiquitin-specific protease 8; Swiss-Prot: sp|Q9C585|UBP8_ARATH Ubiquitin carboxyl-terminal hydrolase 8; TrEMBL-Plants: tr|A0A0B2SA22|A0A0B2SA22_GLYSO Ubiquitin carboxyl-terminal hydrolase 8; Found in the gene: LotjaGi1g1v0739200 | 18 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT4G17895.1 ubiquitin-specific protease 20; Swiss-Prot: sp|Q9FPS7|UBP20_ARATH Ubiquitin carboxyl-terminal hydrolase 20; TrEMBL-Plants: tr|A0A151TH92|A0A151TH92_CAJCA Ubiquitin carboxyl-terminal hydrolase 20; Found in the gene: LotjaGi2g1v0332900 | 13 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT3G14400.1 ubiquitin-specific protease 25; Swiss-Prot: sp|Q9FPS2|UBP25_ARATH Ubiquitin carboxyl-terminal hydrolase 25; TrEMBL-Plants: tr|I1KU89|I1KU89_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0145200 | 14 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT5G22030.1 ubiquitin-specific protease 8; Swiss-Prot: sp|Q9C585|UBP8_ARATH Ubiquitin carboxyl-terminal hydrolase 8; TrEMBL-Plants: tr|A0A0B2QDA6|A0A0B2QDA6_GLYSO Ubiquitin carboxyl-terminal hydrolase 8; Found in the gene: LotjaGi3g1v0184600 | 14 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G39910.1 ubiquitin-specific protease 3; Swiss-Prot: sp|O24454|UBP3_ARATH Ubiquitin carboxyl-terminal hydrolase 3; TrEMBL-Plants: tr|I1MYR5|I1MYR5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0248500 | 14 | ||
– | Ubiquitin carboxyl-terminal hydrolase, putative; TAIR: AT2G22310.1 ubiquitin-specific protease 4; Swiss-Prot: sp|Q8LAM0|UBP4_ARATH Ubiquitin carboxyl-terminal hydrolase 4; TrEMBL-Plants: tr|A0A1J7GDF7|A0A1J7GDF7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0248500 | 14 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G39910.1 ubiquitin-specific protease 3; Swiss-Prot: sp|O24454|UBP3_ARATH Ubiquitin carboxyl-terminal hydrolase 3; TrEMBL-Plants: tr|I1MYR5|I1MYR5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0248500 | 14 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G39910.1 ubiquitin-specific protease 3; Swiss-Prot: sp|O24454|UBP3_ARATH Ubiquitin carboxyl-terminal hydrolase 3; TrEMBL-Plants: tr|I1MYR5|I1MYR5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0248500 | 14 | ||
– | Ubiquitinyl hydrolase 1; TAIR: AT3G20630.1 ubiquitin-specific protease 14; Swiss-Prot: sp|Q8L6Y1|UBP14_ARATH Ubiquitin carboxyl-terminal hydrolase 14; TrEMBL-Plants: tr|A0A0S3S9M3|A0A0S3S9M3_PHAAN Ubiquitinyl hydrolase 1; Found in the gene: LotjaGi3g1v0325900 | 32 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT3G21280.1 ubiquitin carboxyl-terminal hydrolase; Swiss-Prot: sp|Q84WC6|UBP7_ARATH Ubiquitin carboxyl-terminal hydrolase 7; TrEMBL-Plants: tr|A0A0L9TA17|A0A0L9TA17_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0427700 | 23 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G30890.1 ubiquitin-specific protease 24; Swiss-Prot: sp|Q9FPS3|UBP24_ARATH Ubiquitin carboxyl-terminal hydrolase 24; TrEMBL-Plants: tr|A0A127ZNN3|A0A127ZNN3_CAJCA Ubiquitin C-terminal hydrolase + Tagatose 6 phosphate kinase; Found in the gene: LotjaGi3g1v0545800 | 13 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G17895.1 ubiquitin-specific protease 20; Swiss-Prot: sp|Q9FPS7|UBP20_ARATH Ubiquitin carboxyl-terminal hydrolase 20; TrEMBL-Plants: tr|A0A072TRD5|A0A072TRD5_MEDTR Ubiquitin carboxyl-terminal hydrolase; Found in the gene: LotjaGi4g1v0170900_LC | 12 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT5G57990.1 ubiquitin-specific protease 23; Swiss-Prot: sp|Q9FPS4|UBP23_ARATH Ubiquitin carboxyl-terminal hydrolase 23; TrEMBL-Plants: tr|K7K9R0|K7K9R0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0287500 | 14 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G39910.1 ubiquitin-specific protease 3; Swiss-Prot: sp|O24454|UBP3_ARATH Ubiquitin carboxyl-terminal hydrolase 3; TrEMBL-Plants: tr|A0A072TTI7|A0A072TTI7_MEDTR Ubiquitin carboxyl-terminal hydrolase; Found in the gene: LotjaGi4g1v0396700 | 14 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT2G22310.1 ubiquitin-specific protease 4; Swiss-Prot: sp|Q8LAM0|UBP4_ARATH Ubiquitin carboxyl-terminal hydrolase 4; TrEMBL-Plants: tr|A0A0L9TKM9|A0A0L9TKM9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0396700 | 14 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G39910.1 ubiquitin-specific protease 3; Swiss-Prot: sp|O24454|UBP3_ARATH Ubiquitin carboxyl-terminal hydrolase 3; TrEMBL-Plants: tr|A0A072TTI7|A0A072TTI7_MEDTR Ubiquitin carboxyl-terminal hydrolase; Found in the gene: LotjaGi4g1v0396700 | 14 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT2G22310.1 ubiquitin-specific protease 4; Swiss-Prot: sp|O24454|UBP3_ARATH Ubiquitin carboxyl-terminal hydrolase 3; TrEMBL-Plants: tr|A0A072TTI7|A0A072TTI7_MEDTR Ubiquitin carboxyl-terminal hydrolase; Found in the gene: LotjaGi4g1v0396700 | 14 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G39910.1 ubiquitin-specific protease 3; Swiss-Prot: sp|O24454|UBP3_ARATH Ubiquitin carboxyl-terminal hydrolase 3; TrEMBL-Plants: tr|A0A072TTI7|A0A072TTI7_MEDTR Ubiquitin carboxyl-terminal hydrolase; Found in the gene: LotjaGi4g1v0396700 | 14 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G39910.1 ubiquitin-specific protease 3; Swiss-Prot: sp|O24454|UBP3_ARATH Ubiquitin carboxyl-terminal hydrolase 3; TrEMBL-Plants: tr|A0A072TTI7|A0A072TTI7_MEDTR Ubiquitin carboxyl-terminal hydrolase; Found in the gene: LotjaGi4g1v0396700 | 14 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G39370.1 ubiquitin-specific protease 27; Swiss-Prot: sp|Q9FPS0|UBP27_ARATH Ubiquitin carboxyl-terminal hydrolase 27; TrEMBL-Plants: tr|A0A151TLB0|A0A151TLB0_CAJCA Ubiquitin carboxyl-terminal hydrolase 27; Found in the gene: LotjaGi4g1v0405700 | 13 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT3G49600.1 ubiquitin-specific protease 26; Swiss-Prot: sp|Q9SCJ9|UBP26_ARATH Ubiquitin carboxyl-terminal hydrolase 26; TrEMBL-Plants: tr|I1M9Q7|I1M9Q7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0064500 | 24 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT3G49600.1 ubiquitin-specific protease 26; Swiss-Prot: sp|Q9SCJ9|UBP26_ARATH Ubiquitin carboxyl-terminal hydrolase 26; TrEMBL-Plants: tr|I1M9Q7|I1M9Q7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0064500 | 24 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT3G49600.1 ubiquitin-specific protease 26; Swiss-Prot: sp|Q9SCJ9|UBP26_ARATH Ubiquitin carboxyl-terminal hydrolase 26; TrEMBL-Plants: tr|I1M9Q7|I1M9Q7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0064500 | 24 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT4G10570.1 ubiquitin-specific protease 9; Swiss-Prot: sp|Q9ZSB5|UBP10_ARATH Ubiquitin carboxyl-terminal hydrolase 10; TrEMBL-Plants: tr|I1NIH9|I1NIH9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0200600 | 22 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT4G10570.1 ubiquitin-specific protease 9; Swiss-Prot: sp|Q9ZSB5|UBP10_ARATH Ubiquitin carboxyl-terminal hydrolase 10; TrEMBL-Plants: tr|I1NIH9|I1NIH9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0200600 | 22 | ||
– | Ubiquitin carboxyl-terminal hydrolase, putative; TAIR: AT3G11910.1 ubiquitin-specific protease 13; Swiss-Prot: sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13; TrEMBL-Plants: tr|A0A067JU88|A0A067JU88_JATCU Uncharacterized protein; Found in the gene: LotjaGi5g1v0256900 | 28 | ||
– | Ubiquitinyl hydrolase 1; TAIR: AT1G04860.1 ubiquitin-specific protease 2; Swiss-Prot: sp|Q8W4N3|UBP2_ARATH Ubiquitin carboxyl-terminal hydrolase 2; TrEMBL-Plants: tr|I1MY83|I1MY83_SOYBN Ubiquitinyl hydrolase 1; Found in the gene: LotjaGi6g1v0036200 | 21 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|G7J6M6|G7J6M6_MEDTR Ubiquitin carboxyl-terminal hydrolase-like protein; Found in the gene: LotjaGi6g1v0196100 | 27 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT3G11910.1 ubiquitin-specific protease 13; Swiss-Prot: sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13; TrEMBL-Plants: tr|G7J6M7|G7J6M7_MEDTR Ubiquitin carboxyl-terminal hydrolase-like protein; Found in the gene: LotjaGi6g1v0196100 | 26 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.3 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|G7J6M6|G7J6M6_MEDTR Ubiquitin carboxyl-terminal hydrolase-like protein; Found in the gene: LotjaGi6g1v0196100 | 24 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|G7J6M6|G7J6M6_MEDTR Ubiquitin carboxyl-terminal hydrolase-like protein; Found in the gene: LotjaGi6g1v0196100 | 26 | ||
– | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT3G11910.1 ubiquitin-specific protease 13; Swiss-Prot: sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13; TrEMBL-Plants: tr|G7J6M7|G7J6M7_MEDTR Ubiquitin carboxyl-terminal hydrolase-like protein; Found in the gene: LotjaGi6g1v0196100 | 26 | ||
– | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G17895.1 ubiquitin-specific protease 20; Swiss-Prot: sp|Q9FPS7|UBP20_ARATH Ubiquitin carboxyl-terminal hydrolase 20; TrEMBL-Plants: tr|A0A072TRD5|A0A072TRD5_MEDTR Ubiquitin carboxyl-terminal hydrolase; Found in the gene: LotjaGi6g1v0341100_LC | 13 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 1.47 |