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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0147400 |
| Transcript ID | LotjaGi3g1v0147400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 domain-containing protein; TAIR: AT1G53590.1 Calcium-dependent lipid-binding (CaLB domain) family protein; Swiss-Prot: sp|Q93XX4|C2D61_ARATH C2 domain-containing protein At1g53590; TrEMBL-Plants: tr|A0A072VA30|A0A072VA30_MEDTR Calcium-dependent lipid-binding domain protein; Found in the gene: LotjaGi3g1v0147400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:19804392..19811346) extracted from Lotus japonicus Gifu genome v1.2.
ACCATTCCAGATGTTCCATTCTAAACACCCAGATTAGGACAGAGAATGGTACAGTTACACTTCTTCACCCGCTCCACTTC CCTGTACAATATTTTAACATTTAAAATTCCTCCAATGTTTTGACCCAAATCCCTGTTCTTCATTTCATTTCATTTCATAC CTCAACAACACTTCAAAATCAAAATCTTCTGTTGAATTTCAATATCAATCATTAATAGCTTTTTGGCAAGTGGGGTCAAT ACCAAAGACTCATCAGTTTTTTAATACATTACATTTTTGGGTTCTCTTTTCAACACGCATATTCCGCGTTAACAGATTCA GATTTTGATTTGGATTAATGGGTCTCTATAAAGTTTGTAACTTCGTTGAAGAGACTAGTGATTTCAGTTAACAGGGTGTT TCAACAGTTTCAGTTTCAAAGAGATGGATATAACAGAAATTTCTATCTTACATCATGTTGGGATTGTGCTGATTTGCATC TGGTTGCTATCTGCATTCAATTGCTGCCACCCAATTGCTTATTTTATTTCTCTGATCTATATTTATCTGGTAAGGATCTT GCTTTGCAATTTTTTTGGATTTTCTATGTTTTCCCTTTTGTCTTAGTTTTTTGTTTTTGTTTTTGCTTTTTGATTGTTTA GTTTATGATTTGGAATAGAAACAGTTAAACAAAATTAGGCTCTTCTGAGTGTTTGGATCTGGTTTTGTAGCCTGTGGGCC ATGTCTGTTTTTACCCTATTTGTATTTGTATAGGGTGTGGAATATTCCATTTCTGACTTGGGTGTTTTTCTTTTTATTTG CAAAGGTTCATGAGCGTTATGTTATCAGGCTGCAGAAGAAGTTGCAGCATGAGGAGTGGAAACAAGCTAATCAAAGAAGG GTATGTAATGTAACTCTGCTGATTATAGTTTGGTTATTTGATTTTATGGATCATCAAGTTTGAGATGGATCACTAGTTAA GAAAAATAAATTAGTGTTGAAATAAATTCTTCTTAAATGTTAAACCATCCCTGAAATAAATGGAATCTGTCACTGAAAGT TCAGATACCAAGTTCAAAGCCTAAGCTATTGCCCACCCTTGTTGGGTTCTGACTGAATTATTACTTATCGATAAGGTTGA CATAAACGAGAGTCCAAGATTCATGTTTTGTATCGTCGAAAACAATGCTTTACATTCGATGAAGAAAACTGAATTATCAA GTTCCTTTAATATCTTTGTTTTTTTTGTTGCTTTGCATGTTATAGTATTGTTGGGGATGTGGTATTCTATTGGCAAAGGA TTATGTTATGATTATTTACTAATATGACTTGTATAATGATGGCCTTTGTTGTTTTCAGGTGCTTTCTGATTCTGAAACAG TCCGGTGGTTGAACCATGCAGTTGAAAACATATGGCCCATATGTATGGAACAAATTGCCTCTCAGAAAGTTTTACTCCCT ATCATACCATGGTTCTTAGAGAAGTACAAACCTTGGACTGCTGTATGACTTTTGCCTTTCCGTTATGTGTCTTTAATAAT AGTGCTTGATCAAACAATTTGAATTCTTACAATTTTTTTATAGTTTGAATGTCAATTTTTTATGAATTTCTTGTTTTTGT TTGAGAATTTGACCAAGAGAGATGCTAACACCCCCCCCCCCCCCCTGTTCCTTTTATATTTTTGTTATTTTTATGATTGT GTTTGAGTGTAAAATTGTGACTTTTGTAGTGATCAAATATCGGTATGCATATATTTTATTCGCAGAAAGAAGCCTTAGTT CAGCACTTATACTTGGGAAGGAACCCACCTTTGTTTACTGAAGTGAGGGTGCTTCGCCAGTGTGATGATGACCACTTGGT ATGTGTGTGATGTTTTAAAGCATCATCTCAGGACTGTCCTGTTGAGCAACTGCTACTGATTTTTTTTTTCTTTTTCAGTT TGACTTAAACATTACAGTGTGATCATTGCAGGTTCTGGAGTTAGGAATGAATTTTCTTACAGCTGATGATATGAGTGCAA TACTTGCTGTGAAACTGAGAAAGAGATTGGGCTTTGGAATGTGGGCAAAGCTGAACATAACTGGAATGCATATTGAAGGG AAGGTATGGCTGTGGAGTTTTAATTTTACCATGACTCGTTCGTTGAATATTGAAATTTTATTACCTAATATTCGCTGAAC AAAATAATGGATTTAAGGTTATATACTGGATGTGCACATTTGCGTGTAAGTTTTTTAGGGAAGTTTAAAATATTAATTGA TAGTGGTCCTTCTTACAAGTTATCATTTGTATGAAAGAAAGATTATGCTTCTTAGACAGTTAGGAGAGAAAAGGAATAGA ATAAAATTTGAATTATTTATTTCTTTGTCTTTTGTATAGGTCTTGGTAGGGGTAAAATTTATGCAGACATGGCCTTTTAT TAGCCGTTTACGCGTCTGCTTTGTTGAGCCTCCATATTTCCAGATGACTGTTAAACCTATCTTTACTCATGGGCTTGATG TTACAGACATTCCAGGGATTGCAGGGTGGCTTGTAAGTGTGCCTTGATTTTGTACTGGATGAGAGTAGTTTTATTTTCAT TTCTCTCTCTCTCTCTCTCAGTCTCTCTCTCCACATTCTTTCCTTTTTTCTTGTGCTGTGTTTAATTTATGTTATCTTAA CTTGTTTCTTTTATCAGGATAAGCTTTTGTCTATTGCTTTTGAACAGACCCTTGTTGAGGTAAATTTTATTCTGTTCATG CTCTTATCTTCTTGCTTTGTATGTTCTTGTCTTGCTTCTTTGATGTTGTAATATAAATATGCACTAGAGTTCTTCACATC TTTTAGTAGTTTCAGATGCTATGAACTGTTATAGCTTGCTGATTTTTTTCCTCTATATTTTCATGTTGAAATATTTTGCA GCCAAATATGCTGGTTGTTGATGTTGAGAAATTTGTTTCACCACAACCAGGTAAAACTATATGTCATGCTTTTGAATTTT GTTATAATCTATTTACTTCATAGTCTTGGTGAGTGTTCTATTTCCATTAGATTTTGCGGTGTGAGTGTCTATCTCTAAAC TTAATTCATGTTAGAGCATTATGATTTATGATGTTATTTGATCTATGTAAGTAACTCTATCTGTTGGGGAAAAGCTTGAG TGTTCTTGCTGTTATGTTGGATCTTATAGTCATTATCATTTCTTGAACTCAGGGTTTAAGCATACGAAAGTAATTCTACA TTCCAACATTTTTATCTTTTCTTTTCTCACTTTTTTTCTTAACCTACTATTTGTAGCTTTGAAAAAAAAAAACCACATCC TTTTTTAGGTTTTATTTTCTAGAAGTTTACATGATTATAAAAGTTGGTCTTATTTTGCATTTCAAGTTTCTATTCCGATA ATTATGTTGTCTATTTTAAAAAAACTAAGCAAATGTGGTGTTTTATCTAAAATCTTCAAATTCTCATTTTCTATCCCAAT AATATTTTTCAGAATTCTGAAATCTAGTGGAAATTTAAAAAATTGAAAGATTTTGTAGGATGTATGATATTAGGGTTTGA AGTGAGAGGAATTTGGGATTTTATGATTTTGGATGAATTGTATTGTTGAAGAATGTTTAATATGAAATGTTTGGTGAGGT TTTAGTTGAAGAGTGTTTAATATGATTTCATTAATGTGATTTGTGATGTTTTTGGGTCGAAAATAAAGGTTTGAGATTTT TAAATAGAGATATTGATGGTGGGACAGTGGGACTTAATTGTTATCATTTGAAAAATTTGGAATTAAATTCATTTGAAATA TAATTGTGGGAACAAAATCATGCATTACTGCATTAGTTATAATAATTATAATAAAGGGACTGAAAGTGTAAACCTAATTT TTTAGAATGTATGTTTCAAATAAAAAATTGTTTTTTTACCACTTAAAACAAAAGCACAAACAGCCCATTATTTAGGCCAT CAGTTTCCGACAACCAACCAATGTTTAGTTCAAACTTAAAATTGGACATAAGCTTGTCACTTTTACTGGTTTGTGTGGCC AACCTTTTAACCATTGCATTTTTGTACTGTTTTGCATTTTTAAGTACTAATAATCCATCCATAAATCTTAATGTTACAGA GTCTTGGTTCTCGGTGGATGAGAAGGACCCTGTGGCTTATGCAAAAATAGTTGTTGTTGAAGCATCTGACATGAAGCCAT CTGATTTAAATGGTTATCCCTTTCTCTGTGATGATTCTTTGACAGTCTCTAATATGTGTACGTGAGTGCTGACAATTTTT AGTATATTTCAGGATTAGCAGATCCTTATGTGAAAGGTCGTTTGGGGGGATACAGATTCAAAACAAAGATACAAAAGAAA ACACTTAGTCCAAAATGGCAAGAGGAATTTAAAATTCCCATATTAACATGGGAGTCTAGCAACATGCTGGTTATTGAAGT TCGTGACAAGGACCATTTCTATGATGATAACCTCGGGTTTGTTCTGTTCTTAAATTTGTATTTCTATTATGTGGGTTTTT TATTTTACATTTTTGTCCCCAAAATGAACTTCCTCTTGACTTGTCTTTTGTGGTATTATTAAGATATCAATCTTACTATC ATTCAGTACATGTGTTAGACAACTATGTGTGGTTTCATGCTGGGATATGGACATTCATTTATTATTTATGTTTGATAACA ACTATATCTTCATTCCAATACCATAATAAGATCCTATGCGACGTTGGGAGAACCATTTGGCTCTCTCCTATATTTCCATC ATATTGGCTTCTGTTAGACTTCCTTACTTGCCATTCCCAGAATATCTGAAATTTATTGATGGAGCAGCATACAACGCGTC AGAATTTTTATGTGTCCTTAACAGTCAACACCATATATTTTCTTTTATTGATGTGTCCTTAACAATTAAAACCATATATT TTCTTATATTTATCAACTTAGTAAGAATTCTAAATGTTGAATGTTTCAGTTTCCCATTAATATTACGATATTTCTTTGTA TCTCATTTGACACCTTCTCTATCACTCTGTTTGATCATTAATTTTCTTGCTGTCTGTACTATCCTTTATTCACTGCGTCT GTTTCGCATGAAGTTCTGGCAATTATTCTGTCACTGTCAGCCTAAATGTTGTACTGTTTCCAGGGACTGTTCTGTGAACA TCAATGATCTTAGGGATGGGCAAAGCCATGATATGTGGCTGCCACTTCAGAACGTAAAAATGGGGAGGTTGCATTTGGCA ATAACTATTCTTGATAACAATGAAAAGGTAATTCTCTCTCAATTATATCGGTACTTGGCAGAATTTGAAGATGAGCATTT TACATGAAGAATAGGATACAGATGAAAATGAAAATGGTTCTAGTGTGCATGAAATCCAACTAGTGGCTCTTACGTTTTCT AATCTGTTGTTGGTGTTTGATTTCAATTTTGAATCTGTACAGGTAGTTGATAATATATGTGGTCAGGAAACTGCAGACAT CGAAGAAAGAAAAGATTCCTATGCAAATGAGACTACTAATAAAAGTTCCTTCTCATCTGCTTCATCTGACAAATCCCCCA AGATGGCAGATAACTATGAGCCTGTAGATGTCGATGGTCAAAAGGAAACAGGAATTTGGGTTCATCACCCAGGAAGTGAA GTTTGCAAAACTTGGGAACCAAGAAAAGGGAAGAGTCGACGCCTCGATACAGAAATTCGCGGGGAGCCTAATGATTTAGA TGGTAACCGCAATTCAACTGCCTCTGGCCCGTTGAACAATGACAGCAGCAGTCCTGATGACAATACTGAAGATAAACATC TAAGGAGATCATTTAGAAGGGGCCTGCACAATATTAGTTCAGTATTTCGCAGGAGTAAAAAAAGGGATGATAAGTCAGAT CCTATCAGCGAGGAGTTTTCGTCACCACGTGTTAACATTAGGTCAGTCAATGAAAAGGGGGTCGGTGTGCAGTTTATTAT GGAGGATCACATTTCTGGCTTTCCCACTGGTAAGATTCAGGTAGAAGGCGGATCAACTGAAGGGAGTGGTCCTGATAGCC CAGCCAAGGGAAATGTAAAGGATATGGCGAAGAATATTTTGAAGCATGCAGAGAAATCGGCTCGCAGCTTAAAGCATGCT ATTTCTCGTAAATCAGGGAAATATAAAGGCGAGTTACCAACAGCTCCAGAGGGAGAAAATGAATCCGACTCTACGGATGA TGAATCTCTTTCCGCTCAGTCACCCATAGATGAAAGAACTACCATTGCTTCCCAGGCCACAGTCTCAGGCAACAATGGTT CCCCCAATTCCAGGGTGAATGTGGTTCAATCAGTTCCGTCTAACACAGTCTCAGGCAACATTGGTTCCCCCAATTCCAGG GTGAATGTGGTTCAATCAGTTCCGTCTAACACGGCTGTGGAGGGTGAAGCTCCAGTGGAGAACACCAAACTTGAAGTAGT GCCGGAAAAGGCATCCTCCCCTGACAGGTCTGGTGAAGAATTTATTAAATCTGATCAGCTGGAGCGTGATAAAGAGGAAA TTGTGGCAGATAAATGAGATGTTGTCAGTTTCTTCAGCTGATGAATGGCTTGGCAAGTTTATATTTTGTCCAGCATTCTA TAGTTGTGTTCTTGTCTGTACAGCTTTTCACTTTTATAGTCCTTGGGATAGTTAATAGCCATAGGTCATGTAACATATGT TCTGTATCAGGTGCTGGAAAGTTTTATTTTCAGTAGAGGTTTGTTAGCTTGCAAAACTTACACAAGGAAAAAAGATAAAA GATATGCAATCTGTTTTGTCCCCTTACAGCATTTATAGAGTTGGCATTTACCAACTTTTTTATGGTCCACGGTGTCTCAT GCACTTGTAAGACATGAGAAATACAGTATTATGGTTGACCCTTTTCTGTATCCTTGAGTGAGTGTGATACTAAGGAGGCG AGCGATTTGACATTAAGGGCCTGTTTGGTTACGCATTTAATTTTTCAATTAAGTGTTAATATTACATTTTGTGAA
CDS sequence (LotjaGi3g1v0147400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATATAACAGAAATTTCTATCTTACATCATGTTGGGATTGTGCTGATTTGCATCTGGTTGCTATCTGCATTCAATTG CTGCCACCCAATTGCTTATTTTATTTCTCTGATCTATATTTATCTGGTTCATGAGCGTTATGTTATCAGGCTGCAGAAGA AGTTGCAGCATGAGGAGTGGAAACAAGCTAATCAAAGAAGGGTGCTTTCTGATTCTGAAACAGTCCGGTGGTTGAACCAT GCAGTTGAAAACATATGGCCCATATGTATGGAACAAATTGCCTCTCAGAAAGTTTTACTCCCTATCATACCATGGTTCTT AGAGAAGTACAAACCTTGGACTGCTAAAGAAGCCTTAGTTCAGCACTTATACTTGGGAAGGAACCCACCTTTGTTTACTG AAGTGAGGGTGCTTCGCCAGTGTGATGATGACCACTTGGTTCTGGAGTTAGGAATGAATTTTCTTACAGCTGATGATATG AGTGCAATACTTGCTGTGAAACTGAGAAAGAGATTGGGCTTTGGAATGTGGGCAAAGCTGAACATAACTGGAATGCATAT TGAAGGGAAGGTCTTGGTAGGGGTAAAATTTATGCAGACATGGCCTTTTATTAGCCGTTTACGCGTCTGCTTTGTTGAGC CTCCATATTTCCAGATGACTGTTAAACCTATCTTTACTCATGGGCTTGATGTTACAGACATTCCAGGGATTGCAGGGTGG CTTGATAAGCTTTTGTCTATTGCTTTTGAACAGACCCTTGTTGAGCCAAATATGCTGGTTGTTGATGTTGAGAAATTTGT TTCACCACAACCAGAGTCTTGGTTCTCGGTGGATGAGAAGGACCCTGTGGCTTATGCAAAAATAGTTGTTGTTGAAGCAT CTGACATGAAGCCATCTGATTTAAATGGATTAGCAGATCCTTATGTGAAAGGTCGTTTGGGGGGATACAGATTCAAAACA AAGATACAAAAGAAAACACTTAGTCCAAAATGGCAAGAGGAATTTAAAATTCCCATATTAACATGGGAGTCTAGCAACAT GCTGGTTATTGAAGTTCGTGACAAGGACCATTTCTATGATGATAACCTCGGGGACTGTTCTGTGAACATCAATGATCTTA GGGATGGGCAAAGCCATGATATGTGGCTGCCACTTCAGAACGTAAAAATGGGGAGGTTGCATTTGGCAATAACTATTCTT GATAACAATGAAAAGGTAGTTGATAATATATGTGGTCAGGAAACTGCAGACATCGAAGAAAGAAAAGATTCCTATGCAAA TGAGACTACTAATAAAAGTTCCTTCTCATCTGCTTCATCTGACAAATCCCCCAAGATGGCAGATAACTATGAGCCTGTAG ATGTCGATGGTCAAAAGGAAACAGGAATTTGGGTTCATCACCCAGGAAGTGAAGTTTGCAAAACTTGGGAACCAAGAAAA GGGAAGAGTCGACGCCTCGATACAGAAATTCGCGGGGAGCCTAATGATTTAGATGGTAACCGCAATTCAACTGCCTCTGG CCCGTTGAACAATGACAGCAGCAGTCCTGATGACAATACTGAAGATAAACATCTAAGGAGATCATTTAGAAGGGGCCTGC ACAATATTAGTTCAGTATTTCGCAGGAGTAAAAAAAGGGATGATAAGTCAGATCCTATCAGCGAGGAGTTTTCGTCACCA CGTGTTAACATTAGGTCAGTCAATGAAAAGGGGGTCGGTGTGCAGTTTATTATGGAGGATCACATTTCTGGCTTTCCCAC TGGTAAGATTCAGGTAGAAGGCGGATCAACTGAAGGGAGTGGTCCTGATAGCCCAGCCAAGGGAAATGTAAAGGATATGG CGAAGAATATTTTGAAGCATGCAGAGAAATCGGCTCGCAGCTTAAAGCATGCTATTTCTCGTAAATCAGGGAAATATAAA GGCGAGTTACCAACAGCTCCAGAGGGAGAAAATGAATCCGACTCTACGGATGATGAATCTCTTTCCGCTCAGTCACCCAT AGATGAAAGAACTACCATTGCTTCCCAGGCCACAGTCTCAGGCAACAATGGTTCCCCCAATTCCAGGGTGAATGTGGTTC AATCAGTTCCGTCTAACACAGTCTCAGGCAACATTGGTTCCCCCAATTCCAGGGTGAATGTGGTTCAATCAGTTCCGTCT AACACGGCTGTGGAGGGTGAAGCTCCAGTGGAGAACACCAAACTTGAAGTAGTGCCGGAAAAGGCATCCTCCCCTGACAG GTCTGGTGAAGAATTTATTAAATCTGATCAGCTGGAGCGTGATAAAGAGGAAATTGTGGCAGATAAATGA
Protein sequence (LotjaGi3g1v0147400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDITEISILHHVGIVLICIWLLSAFNCCHPIAYFISLIYIYLVHERYVIRLQKKLQHEEWKQANQRRVLSDSETVRWLNH AVENIWPICMEQIASQKVLLPIIPWFLEKYKPWTAKEALVQHLYLGRNPPLFTEVRVLRQCDDDHLVLELGMNFLTADDM SAILAVKLRKRLGFGMWAKLNITGMHIEGKVLVGVKFMQTWPFISRLRVCFVEPPYFQMTVKPIFTHGLDVTDIPGIAGW LDKLLSIAFEQTLVEPNMLVVDVEKFVSPQPESWFSVDEKDPVAYAKIVVVEASDMKPSDLNGLADPYVKGRLGGYRFKT KIQKKTLSPKWQEEFKIPILTWESSNMLVIEVRDKDHFYDDNLGDCSVNINDLRDGQSHDMWLPLQNVKMGRLHLAITIL DNNEKVVDNICGQETADIEERKDSYANETTNKSSFSSASSDKSPKMADNYEPVDVDGQKETGIWVHHPGSEVCKTWEPRK GKSRRLDTEIRGEPNDLDGNRNSTASGPLNNDSSSPDDNTEDKHLRRSFRRGLHNISSVFRRSKKRDDKSDPISEEFSSP RVNIRSVNEKGVGVQFIMEDHISGFPTGKIQVEGGSTEGSGPDSPAKGNVKDMAKNILKHAEKSARSLKHAISRKSGKYK GELPTAPEGENESDSTDDESLSAQSPIDERTTIASQATVSGNNGSPNSRVNVVQSVPSNTVSGNIGSPNSRVNVVQSVPS NTAVEGEAPVENTKLEVVPEKASSPDRSGEEFIKSDQLERDKEEIVADK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 5 | 702 | 698 | 0.0 | – | |
| PANTHER | 5 | 702 | 698 | 0.0 | – | |
| Phobius | 12 | 42 | 31 | - | – | |
| TMHMM | 12 | 43 | 32 | - | – | |
| Phobius | 43 | 769 | 727 | - | – | |
| ProSiteProfiles | 71 | 264 | 194 | 17.602 | ||
| Gene3D | 272 | 401 | 130 | 3.7E-32 | ||
| SUPERFAMILY | 278 | 401 | 124 | 3.59E-30 | – | |
| SMART | 285 | 382 | 98 | 9.0E-18 | ||
| ProSiteProfiles | 287 | 367 | 81 | 13.609 | ||
| Pfam | 287 | 385 | 99 | 2.2E-19 | ||
| MobiDBLite | 421 | 453 | 33 | - | – | |
| MobiDBLite | 428 | 444 | 17 | - | – | |
| MobiDBLite | 473 | 496 | 24 | - | – | |
| MobiDBLite | 473 | 558 | 86 | - | – | |
| MobiDBLite | 497 | 515 | 19 | - | – | |
| MobiDBLite | 540 | 555 | 16 | - | – | |
| MobiDBLite | 587 | 769 | 183 | - | – | |
| MobiDBLite | 613 | 629 | 17 | - | – | |
| MobiDBLite | 658 | 727 | 70 | - | – | |
| MobiDBLite | 740 | 769 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of LotjaGi3g1v0147400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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