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LotjaGi3g1v0148700.2

Overview

Field Value
Gene ID LotjaGi3g1v0148700
Transcript ID LotjaGi3g1v0148700.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description BTB/POZ domain-containing family protein; TAIR: AT2G46260.1 BTB/POZ/Kelch-associated protein; Swiss-Prot: sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260; TrEMBL-Plants: tr|A0A1J7HQD6|A0A1J7HQD6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0148700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:20000692..20006773) extracted from Lotus japonicus Gifu genome v1.2.

TGATCCAGTTATTAGATTCGCGTGTCAGACAAAAAAGAACATACACTCTCCCTCTTCCTCTCAAACCGCCTCCATCTGTT CCAATTTTCAATTTTGTGTTTAGGGTTTGATCTTGTAGGCAAGGAGTGTGTGAAGAAGCGTTCAAAATTGAATCTCTTTG ATCCTGCTTTGGTGATGGAGTCTTCTTGTGAACCCAATTTCAGCTTCGGTTTCAATGATATCCATTACTCCGACAGAGTT CTCCGTATTGAGTTCATTCCCGACCCGGTTTATGCAGATCGTCACCGTATGAAGAAACGCCAAAAAGGTAATTTCCGTTC GTGTTTTTTTGTGGGTTTTGATTCTGATGGATTCTGGTGTGGCAACTTTGAGAAAATTGTCTAATTATGCTCGTGTGATC GCCCCTATTTTCTCAATGTTGCAGTTTTGAATGGGAATCAACCTGTTGATATGGATGATGATGATGAGACTTGTGTAAAC AATGATTCAAACTCTGCAGCTGCTACAGTTGTTCGAGTTGAAACACTGCATATCAGTTCTCTTATACTGGCAGCTCAAAG CCCTTTCTTTCTTAAGGTATATAAACACCTCTTCTTTATAGACTAATGCATACTTCGTTCTGCCAAAAATATGTTTGAAT AGCACCAATTTTCTCTTTTCAGCTATTCTCAAATGGTATGAGCGAGACAAAGCAGAGACATATCTCCCTCCGGATTTATG CATCTGGTAAATTTTTGTATCTTTACTACTGATCGTTTTAATTTTTCGTCAAATAATCCACTAAATGTTATATTCTTTTT CATTACAGAAGAAGATGGTCTCATGGAGCTACTGAAATTTTTGTACAGTAATACTTTGAATATTACGGCAGCACCTGCTT TGCTGGATGTACTTATGGCGGCTGATAAATTTGATGTGCCTTCATGCATGAGATACTTGCTAAATTTGCCCATGACACCG GACTCTGCATCACTCTACTTGGAGCTTCCTCATACCGTTGATGCATTCCAACCGCTGATTGATGCTGCAAAGCAGTATCT TGTTGGTCGATACAGGGAAATAACCAATGACAAGTAAGACTTTGCATTTATTTAATTTCAGTTGCATCATCGTAAAGGAA AAAACGTACAAGTCCATTCCATCAAGTATAGAAATTATACCATTATATGATTGGATAACTTGATAAAATGGATATAAATA ACTTATATAAGTTTTGTGCTATCTTAAATTCGAGCACTACAAATATTTTATGTTTTTTTCTCTTCTATAAGTTCCTTAAC AAGTTGTATGTGTGTTGCATCTAATGTATGAATCTTGGTGGATGGATTTTATTTTTTCGTCTATTTTGGCATTCATGAAG TGCCGTTTCAAACCTTTTCTATGACTTCATTGATTCTAATTGTCCATTCTTTTGAAAAACACATTTCTTTGTTTTTTAAT CCTAATAATATTGTATCTTACAAGGTATAGGGAAAAGCATATGGCCTTGTCTCTTTCTGCAATAGAGGCAATCTTGGCTA GTGATGGGCTCCAAGTTTCATCAGAAGATGGTGTATATGACTTTGCATTAAACTGGGCTAGACAAAAGTACGACAGTCTG AAAGAAAGGCGAGAAGTTCTGGCTACACGACTTGCGTGTTTAATTCGCTTCCCTTATATGACATGCCAAAAGCTTGAGGA CGTCTTAACCTGTAATGACTTTGAACATGAGAGTGCATCTAAGCTTGTACTTGAAGCCCTATCTTCGAAAGCGGAGGCTC CACATTGCCAACGACCATTGGCAGCAGAAGAGTCTATTTCCTTGAACCGGCGTTTTAGGGCGAGGGCATATAAGCAGCTT TTCTACATGCATTTGGAGTGGAAGGATTGTGTCAGCTTGTTCCCATCTGGCCATGTGGATTCTGAGCCTTTCGATTTTGG TGGACAAATGTTTTTTCTATCTGCACAATGCAACATGGACAACAATGGCTCCCATTGCTTTGCGCTGTCTTTGGGAATGA AGGAAAGTTGCTCAGGAAGCATTGATGTGGACTATGAATTTACTGCAAGGTTGAAGAAAACAAAGGAATTTATTAGCCTG CACAAATCCAATTGCACATTTAACGGAGGGACCCATATTGGCTGTAAAAACCTCTTTGATGTTCCATGGACATTCTTCAT TGAAGAGAATAGTATTTTCTTTGTTAACGGCAGTCTCCACCTAGCAGCCGAGCTCACTATCACACATTGATTCCTTATTT CTATCTATGAACTATTTTTGAACTATTTATTCTAGCTGGATAGCCTTGACTTTTAGCACATTGATCCCTTATTTCTTTAT TTCTATTTATGAACTTACTATTTCTTTTTATTCTTGTTGGATAACCTTGACTTTTAGCTGCTGATTTTGATTTCTGATTT TTTTTTTGTTAAACTGCTAATGTCAATTTGATGTTATCTACTAACTGAAAATTCAGAGTTCAATTTCACTGTTCATGCGC ACATTTTTCTTGTGTCCTCACTTGGCATGTTATTGGGCCTCTTCGTTATTGGGCTGTGTTGGAAACCCTGTTCTAACCCT CCTAGGGTTAGGCGAGACCCCCTCTCTAAACATCATCTACGCTGTAGCCGGCCAGACTGCAACTCTACCTGGTGGTCATC ATCTCACCTCATCCCCTTTTGCACTTGCAAATCGTACTTCTGCTACCCTAGCTATTGCATGCGACATGTGCTCTACTCTT CTCTAGGTCGTCCTTTCTGTATCCCTTTGCTGGATTTTCGCATAAAGTTGGAAGCCATAACCCTCGAAATTTTACCTATT TCCTTGCACGATTCAAGCTTCGATTTAACCCTCCATCAGTGATCTATGATCTACACCCTACCTCGAAAACCAGCTATTGA TTATGCTTTCCAGGTTGTGTGGCTACACTCTAGATCAGAAAGCCAGCTCTTAATTCTTCTATACAGGTTTGTTTATTTGA TGCACTGCCAATATTGCTGGATTCACTATCTTTATATCTGTAGCTTTTTTGTGCTTATAAATTGAACCTTTGGTTGCCAG GTTCAAATTCATTCTCTACATGTTTACATATGGTCTGTTCTCAATGAGGTTGAGACTTGAGAGGTCGAAGAGACCAACGG AACCCTTCACCTGCAGATGTGACCTCCAGATTCATCACTGCAATGCCATCATTTCCACCACCCGTCAGTTCCAAATTTGG TGATTATCAATGGTCAATTTTCTTCCCCCATGCGTTGTTACTTGTTAGTACCAAGTTTCAAATCTTAGTTGCATTGTTCA CACTTATCCCAATTCACAATGCAATGCAATGCAATGCAATGGGTGTATGGTCTAAGATAAAAGGGAAGCAGACATGATTT AAGGGTATGTATTTTTCTTTTGGATTCTTTCTACTGATTATTGATTTTGGAATTGGATTTTGATATGCCAAATGGTGATA TGTATGTTTTTATTTGTGCAGCTATCATTAACAATCTTCCTCCATCGGAAATTATTGACCCATGTACATCATGTAGCAGC TATATACACAGCTCAGGTACATGCACATTATGTGCTATGTATTTTTCAATTATACTTGATAAATTACCTACTTAGGAAAC CTCCATTTTCGTCTTTGACCTTGAAATGGTTTTTCATATTAATCCCTGCACTAAAGAAATATGAATTAAAGTCTTAGACC TATATTTGAGGGCTAATGGGAGTATGTGACTATAAAAAGATTGAGGATTCAGTTGACTTAAAGAAGCCCAGGTGAGGATC TTTGTTCATGTTTTTTCAATGTAAGGACTAATATGAAAAATCATATCATGGTCGGCGATGAAAATTTCATGCAATCATTT ACTATTAGTGTGTTAGGATAACATAATAACGTGAACTAACTTTCATCTTAGTCCTAAGAAGAGTTTCATTCTTTTTTTTT TACCTTTGAAGTGAGTTCTAACGTCTTCAGTGCCAACATTTATCAAACATAGCCTATAAAACTTTGTAATATTACTTATG CTTTGGTGGTTGATTCCAACTTTGAATCATTCTAGGTAGCTTCTCAACATGGCACATATCTTGCTGACTGTGTCAATCGC ATGGAGTTGTGTGAGAAGTATCCTGAAGGCCCTCTTAGGTTCAGGGGTACAAGACACTGTTGCAAACCCAAACACTAGGC CCAGATTTGGCAGAGTTTATGAGAGAAGGCCCAAGCAAGTGCTAGCTGCACCTGGTGACCAACATTCTAGAAGCTAGGAT CCCTAGATAACCGCCTAATGAGGTGGCAGCACCCATGTGGGTGAGGGGGGGACCATAGGAAATAGAATATATGTTGGTTA GGAAGAGAGAGAGAGGTAGGCAGAAATTAGACTGGTTTTGGGAGAGATAGAGCACTCTCGAATTTGCTCATATCCTTGTA TTTCCTTTTCTTGTATTTCCTTCAAGCACTACTACTGGTTCATATCAGGGGAATTCAGTGCATTAATACAATTTCTAGTT CTTGTCCTTAATCTCATTTCTCTGGTACCTATCATTGGTATCAGAGCTCCCGATCCAAAGGGAGCTGTGTATGGTGCTCA CCCGCGGCGCCATGGAAACACGAGTAGATCATTTGGAGCGTTCGATCACTGAAATGAAGGAGGTGGCACAGGAACAGTTC GAGGAGCTCCGGCGACTCTGTATGGGTCGCGACAGGCGGCGCACTCGAGGCCGTTCCCAGACCCCACGCCATCGGCGAAC GTCGAGAGACGCAAGCTCACTCTCTATGATGCGAAGCGACGCTGGAGTCCATTCCGGGTCGCGAACCGGGTCACGAGACC CGACACTCGGTCACGAACACCGAGAGCACTACCAACACCGCCATCATCTGAGGGCGGTCACCGGACGAAGAGTCGACATA CCGATGTTCAACGGTAATGACGCGTATGGGTGGATAACGAAGGTGGAGCGATTTTTCCGACTCAGTCGAGTCGACGAGGG AGAGAAGATAGAAATGGTGATGATTGCCATGGAGGACCGAGCCCTCAGCTGGTTTCAGTGGTGGGAAGAGCAAGCCCCTG AACGCGCCTGGGAACCGTTCAAGCAAGCTCTGATCCGTCGTTTCCAACCGGATCTGGTCCAGAACCCGTTTGGACCTTTG CTGAACGCCAAACAGCGAGGAAGTGTCATGGAATACAGAGAAGCGTTTGAGCTTCTAGCCGCACCCATGAGGAACGCCGA CAGGGAGGTGTTAAAGGGGGTTTTTCTGAGTGGGTTACATGAAGAAATTAAGGCTGAAATGAAACTATACCCAGCGGATG ACCTTGCAGAGTTAATGGATAGAGCTCTGCTATTAGAAGAGAAGAACTTTGCCATGAGAGGAGGGAAGGCAAGAGAAGAT GACAAACGAGGTTGGAAGGATAAAGGGGGTGCGGGAGTAAGATTTTTCCCCAACAATGGAGACAGCAAAGGGAAATTTCC TAGCACAACAATGACTAACCACACTAAGAGTGGTACTGGAACCCCAGAAAATGAAGGAAAGAACCAGATGACTAAAGGGG GAACAGGAGGTAATGAAGGAAAACTTCCTGAGAGGAGGTGGAATGGAGGACAGAGGCTTTCTCAGTCAGAACTGCAAGAA AGAAGTAGGAAGGGGTTGTGCTTTAAGTGTGGGGAGAAGTGGGGAAAAGAGCACATTTGTGCAATGAGAAACTACCAATT AGTTCTGGTAGAGGGTGAAGAGGAAGATGAGGAAGAAGAGGTCTTTGAAGAGGCAGAGGATGGGGAGTTTATTTTGGAAG GGAAGGTTTTGCAATTGTCACATAACAGTAAAGAAGGGCTAACATCCAATAGGTCTTTCAAGGTTAAGGGGCAGATTGGG AGTAGAGAAGTGCTAATGTTGGTTGATTGTGGTGCCACTAGTAATTTCATCTCACAAGACTTGGTGAGGGAACTGAACCT TCCTGTAATTGCAACTTCTGAATACATAGTGGAGGTAGGGAATGGGGCCAAGGAAAGGAACTCTGGGGTTTGTAAGAACC TGAAACTTGAAGTTCAGGGAATTCCAATTATCCAACACTTTTTCATCCTTGGGTTAGGAGGAACTGAAGTGGTTCTGGGA AT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0148700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGTCTTCTTGTGAACCCAATTTCAGCTTCGGTTTCAATGATATCCATTACTCCGACAGAGTTCTCCGTATTGAGTT CATTCCCGACCCGGTTTATGCAGATCGTCACCGTATGAAGAAACGCCAAAAAGTTTTGAATGGGAATCAACCTGTTGATA TGGATGATGATGATGAGACTTGTGTAAACAATGATTCAAACTCTGCAGCTGCTACAGTTGTTCGAGTTGAAACACTGCAT ATCAGTTCTCTTATACTGGCAGCTCAAAGCCCTTTCTTTCTTAAGCTATTCTCAAATGGTATGAGCGAGACAAAGCAGAG ACATATCTCCCTCCGGATTTATGCATCTGAAGAAGATGGTCTCATGGAGCTACTGAAATTTTTGTACAGTAATACTTTGA ATATTACGGCAGCACCTGCTTTGCTGGATGTACTTATGGCGGCTGATAAATTTGATGTGCCTTCATGCATGAGATACTTG CTAAATTTGCCCATGACACCGGACTCTGCATCACTCTACTTGGAGCTTCCTCATACCGTTGATGCATTCCAACCGCTGAT TGATGCTGCAAAGCAGTATCTTGTTGGTCGATACAGGGAAATAACCAATGACAAGGAAAAGCATATGGCCTTGTCTCTTT CTGCAATAGAGGCAATCTTGGCTAGTGATGGGCTCCAAGTTTCATCAGAAGATGGTGTATATGACTTTGCATTAAACTGG GCTAGACAAAAGTACGACAGTCTGAAAGAAAGGCGAGAAGTTCTGGCTACACGACTTGCGTGTTTAATTCGCTTCCCTTA TATGACATGCCAAAAGCTTGAGGACGTCTTAACCTGTAATGACTTTGAACATGAGAGTGCATCTAAGCTTGTACTTGAAG CCCTATCTTCGAAAGCGGAGGCTCCACATTGCCAACGACCATTGGCAGCAGAAGAGTCTATTTCCTTGAACCGGCGTTTT AGGGCGAGGGCATATAAGCAGCTTTTCTACATGCATTTGGAGTGGAAGGATTGTGTCAGCTTGTTCCCATCTGGCCATGT GGATTCTGAGCCTTTCGATTTTGGTGGACAAATGTTTTTTCTATCTGCACAATGCAACATGGACAACAATGGCTCCCATT GCTTTGCGCTGTCTTTGGGAATGAAGGAAAGTTGCTCAGGAAGCATTGATGTGGACTATGAATTTACTGCAAGGTTGAAG AAAACAAAGGAATTTATTAGCCTGCACAAATCCAATTGCACATTTAACGGAGGGACCCATATTGGCTGTAAAAACCTCTT TGATGTTCCATGGACATTCTTCATTGAAGAGAATAGTATTTTCTTTGTTAACGGCAGTCTCCACCTAGCAGCCGAGCTCA CTATCACACATTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0148700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MESSCEPNFSFGFNDIHYSDRVLRIEFIPDPVYADRHRMKKRQKVLNGNQPVDMDDDDETCVNNDSNSAAATVVRVETLH ISSLILAAQSPFFLKLFSNGMSETKQRHISLRIYASEEDGLMELLKFLYSNTLNITAAPALLDVLMAADKFDVPSCMRYL LNLPMTPDSASLYLELPHTVDAFQPLIDAAKQYLVGRYREITNDKEKHMALSLSAIEAILASDGLQVSSEDGVYDFALNW ARQKYDSLKERREVLATRLACLIRFPYMTCQKLEDVLTCNDFEHESASKLVLEALSSKAEAPHCQRPLAAEESISLNRRF RARAYKQLFYMHLEWKDCVSLFPSGHVDSEPFDFGGQMFFLSAQCNMDNNGSHCFALSLGMKESCSGSIDVDYEFTARLK KTKEFISLHKSNCTFNGGTHIGCKNLFDVPWTFFIEENSIFFVNGSLHLAAELTITH
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR46336
3 456 454 1.2E-167 –
Gene3D
G3DSA:3.30.710.10
35 193 159 8.2E-16 –
SMART
SM00225
68 164 97 2.8E-7
IPR000210
ProSiteProfiles
PS50097
68 137 70 12.681
IPR000210
Pfam
PF00651
73 157 85 7.8E-12
IPR000210
CDD
cd18186
73 151 79 9.70507E-14 –
SUPERFAMILY
SSF54695
77 159 83 3.92E-11
IPR011333
SMART
SM00875
179 278 100 6.1E-4
IPR011705
CDD
cd18457
184 275 92 2.27633E-9 –
Pfam
PF07707
184 276 93 2.0E-8
IPR011705
Gene3D
G3DSA:1.25.40.420
194 299 106 6.8E-10 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0148700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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