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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0161400 |
| Transcript ID | LotjaGi3g1v0161400.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-galactosidase; TAIR: AT2G28470.1 beta-galactosidase 8; Swiss-Prot: sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8; TrEMBL-Plants: tr|I1M4L7|I1M4L7_SOYBN Beta-galactosidase; Found in the gene: LotjaGi3g1v0161400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:22011230..22016905) extracted from Lotus japonicus Gifu genome v1.2.
ATGTGGCCAGACCTTATTCAGAAATCCAAAGATGGAGGACTTGATGTGATTGAGACCTATGTTTTCTGGAATTTACATGA ACCAGTTCGAGGCCAGGTTTTGTTCTGTTTTCAACTTTTCATATTCTGATTTTCAGCATTGTATTGCATTGCATTTGTGA GCTGCTGATCAAATACTATATAGAGATCACATTTTTTGGTCTAGTTTTGAATGAAAATTGAAAGTCTTAGATTAACCTCA GAAGGACTATAATTGGTGATAACAAATGCAAATTTGGCAGTATGATTTTAAGGGGAGGAAGGATTTAGTGAAATTTGTGA AGGTTGTAGCTGAAGCGGGTCTATATGTGCATATTCGGATTGGTCCATACGTGTGTGCTGAATGGAACTATGGGTAAAAT TTGGTCCTTTATGTGTTTTCTATATCTGGGGTGTTCATGTCTGATAGAGGGTTTTATTGACTTCTCAACAGTGGTTTCCC TCTTTGGCTGCACTTCATTCCGGGAATTAAGTTCAGAACTGACAATGAACCATTCAAGGTAACCCTCTTTCTTGGTGCTT CATGCTATTGTTGTCCTTGTAGAACCGGAGTTCACTCGACGTGAATGAAACTTTGTCCTCAGGCAGAAATGAAACGATTC ACAGCTAAGATAGTGGATATAATCAAGCAAGAGAAACTATATGCATCACAGGGAGGACCTGTTATTTTATCTCAGGTTTT TTCTTCCCTTCAATTTATCAAATACATGGTCAATTCTTTAATTTTTAAAAGAAATGATTAACATCCAGATGTTGAGGTCT AATAGATGTAGTTTTTTCTATGTTTGTGAAAGCTTGTATTAATATGAGAATATGTGTGCTTTCTAATGCCAGATTGAAAA TGAGTATGGAAATATTGATTCACATTATGGTTCTGCTGGCAAATCCTACATCAAGTGGGCAGCATCAATGGCTACATCTC TTGATACAGGAGTTCCCTGGGTCATGTGCCAGCAAGCAGATGCTCCTGATCCGATTGTTAGTTTTCTGATTTCTCCTTAT AATCATAAAGTGTTTGTGGTTTATGTTTTACTAGATTGTCTGTCTTCCTGAAAAGGACAATCTTAGTGTTCTATCTACAT TCAATTCATCATCTTAATTGATTGTTATTTTAACCATTCACAGATTAACACGTGCAATGGATTTTACTGTGATCAATTCA CACCAAACTCTAACACAAAACCGAAAATGTGGACTGAGAATTGGAGTGGATGGTTAGAGTCCTTTTATATATAAATAATT TACTTATTTCAATGAAATATATCCCTCCAAGTGTAATTTGATCGATTATGTATCTCCTTTCTTGTTCTGCCTCTTTTTTT CCCATTTTGTTTCATTCTTTTGAATTCTTTGGAACGGTAGGTTTCTATCATTTGGTGGTGCTGTTCCTTACAGACCTGTG GAAGATCTTGCATTTGCTGTGGCACGCTTTTTCCAGCGCGGTGGAACGTTTCAAAATTACTACATGGTATTGCAACTTCA CATGTGGTTTCAGTTCATTTTATAAGATACTTCAAGGGAAAAAAATCAGCCCTAACTAAATGAATTAAGCTGATACCTTG CTTGGTGAAACAGTACCATGGAGGGACTAACTTTGACCGAAGTACTGGTGGACCTTTCATTGCCACTAGTTATGATTATG ACGCACCAATTGATGAGTATGGTGTGTGCTCTTTAAACGTTCATGTTGTATTTGTATTGTTCGTAAAAATGTAAAATTGT CAAGCTGAATGCAGTCTAGCTTCCATATGCATCTAAAAAGAGAACAGAAAGTACTGCATGTATAGTTTATTTCTAAATGC AGAAGAAAAATTATACTGGAGAATTTTGTTTTCTTCTGTTAAGTTATCTTTACTGCATTGCTGCAGGAATTATTAGACAG CCTAAATGGGGCCACCTGAAAGATGTGCACAAGGCCATAAAGCTCTGTGAAGAAGCGTTAATTGCCACCGACCCAACCAT TACATCACTTGGTCCAAACCTAGAGGTATAAGCAGATTGTGTTGAAATATTTGGTCAAAAAAAGTATATTAATCCAAGTT TTAGGATTGTATTTCTGGATAAACCTATTCTGAGCATAAAACTCTCCTAGTTTATCAAATTTGTAAGTTTTTTCCCTGGA AATGCCCAGCATAGAGTGGAATTTCGCCATAATTACCAATTGGTACACTGGATCATTGTCGTTCATTTAACTGGTTATCT CCTCCTTCATAATGCTTTTTATTGATAATTGCAAATTTTTGCAGTTGATTCTTGTCTTTGTATCTGCATTACCACTTTTT ACTTGGTTTATGAACAATCGGTCTCTCTGTAATGCATGTCTTATACTATTCAAACCCCAGGCTGCAGTTTACAAGACAGG ATCTGTATGTTCTGCCTTTCTTGCCAATGTCGGCACCAAATCTGATGTAACGGTGAATTTCAGCGGCAATTCATATCACT TGCCTGCATGGTCTGTGAGCATCTTACCTGACTGCAAGAATGTAGTGCTTAATACAGCAAAGGTTAGCCTCTTCAACTTT CATTTTCAATTTTATTCAGGTTCACTAAACGATGGTTCCCTAGCATTAAATGTGATGTTAGTTGATTTTCCCCATCAAGA TAGTCAAGATATTTTCCATGATTTTCTAGTCCTAGAAGCAAGTAGCGTTTAGTAAAAATATTTTGTATGGCAGATTAATT CTGCATCTGCGATTTCAAGCTTCACAACTGAATCTTCAAAAGATATTGGTTCTTCAGAAGCTTCCGGTTCAGGATGGAGT TGGATAAGTGAACCAGTGGGTATTTCAAAGACTGATTCAATCTCAAAAATTGGATTGCTGGAGCAAATAAATACGACTGC CGATAAAAGTGACTACTTGTGGTATTCATTAAGGTAGATAGGCCTCCAAGAAAGATATTTCCTGTGACCTATAATTCTCA GCTCCTTGATAACATTTTCTTGCTTTTTTTTTCTTCTGAAAGCATTGATCCTAAGGATGATGCTGGTGCTCAAACTGTTC TTCACATCGAATCACTTGGCCATGCCCTTCACACTTTCATCAATGGGCAGCTTGCAGGTAGATCAAAATTAATGCAATGA GAACAGATGACATGTCTGGATAATTTTGCATTTAGATTTGTTTTTACTAAGTATTCAGATTGCTTTCTATGTTCTATATA TTTTGGATGACCCTTATTTATAATTTTCTTTAATGAAATTTGAGATTTATCCTTCATTGCTGGTCATAGAGAGTACCTTG GTATCATTTTAGGGCTTCATGCACATAAATAGTTTATCCCCCTCCCTCCTATCTTTACACATCTCTAAAGCTTTGGTGGG CAAACATTACAAGTTGTCAGAAGTGATCTATAAAAAAAGTTTTTTATGCTCTTCATCTTCCTACTAGGTCTGGCCATGGA TTAGAAACCAGAAGACATAATTAAAGTTCATGGCTACAGAACAATACACATAACTTCAATTTTCACCAAATATATGGCAT TCAAAAATGACATGGAACACGTCGCACTCGCCTGTTTTATCAGAAGAGGCCGAAATTGTGTTAACAAACGCTAGACTTAT TAAATGTTTCTACTGAGGCTTAACATGATAATAATTATGAGCCTTTCTTGTCGTGCAATTTTTTTGGATCAATTAAAAAA TATGAGAAAATAAAATCAAGGTTGTTTTGAAATCAAGTTAAGGATGTAAGATTAGTTTCTTATGGGTATTTGTTCCCAAA ATGTTCAGAGTTCATTCTTTCAGTTAAGGTCTTAAGTTATTTGATAGTAACCATCTGCGATGTTATTGAAAACCTCACAG GGAGTCAAGCAGGCAATAGTGACAAAGCTAAGATCACTGTGGACATCCCCATCAAACTAGCGGCCGGAAAGAACACAATT GATCTCCTAAGTTTGACCGTGGGACTTCAGGTTCATATTTTCAGATTATAATCATATCATGTATATAAGAATTTACAAGA GAGGAAATAGTGATTTATATACTGCAATTATGCTTTGGCTCGTTAGTTTCAGTCCCATGTGATTTGGTTTGGGATCCAGT GTTTTCTCTTCCTACTACATCAGCTAATGTGATCCTTATATGCATCAGAACTATGGAGCTTTTTTTGAGACATCGGGAGC AGGGATCACTGGTCCAGTGATATTGAAAGGTTTGAAGAATGGCAAAACTCTTGATCTCTCCTCTAAGAAGTGGAATTATC AGGTCTGTCTTTTTGTTAAGGATTGAGAGAGGGTGTGTGTGTGTTAAGGTCACAATGAGCCTGCTAAATTTGCAAGATGA TTCTTAATGTATTGCTTCTAAAATTGAACTCTTTGAAAGGTTTATGATTGAAGCTTTTGCTTAACTGGCTCTAACTACTA ACAGTTCTACATGTCTTAACTCTTAATCCCTTGTGACGTGCCAAAGTGCTTGAAGTCTCTTTTCCCCTTTTATAGATTAG TTCAGTTTATATGCAAGAAAAAACCAAGTGCAATTATTTATTTTGAAAACATGATGCGATAGAACTGAAGCCAATTGAAT GCCATTTGTACTTTTTGGTAATAGGCCCTTTATTTTCTTGATACAGGTTGGCCTCAAAGGTGAAGAATTAGGCCTTTCTG GTGGAAGTTCTGGACAGTGGAATTCACAATCTACCTTCCCTAAGAACCAACCATTGATTTGGTACAAGGTAATCTTACTT ATCTGTAACCCTAAGAATTCGGAATAATACTTATCTCATGCTTACAGACACTTTATACTGCAATTATGGGAATGATACTA TAGGAAAATTATTTTTTGCTACTATTACTAACTAATGTTGTACATTTTGCATTAGACGAACTTCGCCGCTCCATCCGGCA GTAATCCAGTTGCAATTGACTTCACGGGGATGGGAAAAGGCGAGGCTTGGGTGAACGGACAGAGCATTGGGCGGTACTGG CCAACATATGCCTCTCCAAATGCTGGTTGCACAGACTCGTGCAATTATAGAGGATCTTATAGTTCATCCAAATGTCGCAA GAATTGCGGAAAACCATCACAGACACTGTAAGTTGCACATTCTAAACAAGAAATAGTTAAAAAATGAAAATCATCTTGAT CTAACTGAGACACTAAAATCAATCTTGCAGATACCATGTACCAAGATCTTGGTTGAAACCACATGGAAACACTCTTGTAT TGTTTGAGGAAAGTGGGGGTGATCCAACTCAAATCTCTTTTGTCACAAAACAGATACAAAGTTTGTGTGCACATGTATCT GATTCTCATCCATCACCGGTAGACTTGTGGAACTCAGATACAGAATCAGGAACAAAAGTAGGGCCTGTAATGTTGCTCAA GTGCCCTCATCATAATCAGGTCATCTCTTCCATCAAGTTTGCGAGCTACGGAACACCGGCCGGGACCTGCGGAAACTTCT ACCACGGACGCTGCAGCAGCAATAAGGCTCTGTCCATTGTGCAGAAGGTGTTATCTTGCTTCCTCTTCCCTTGTTACTCC GATTTTGATATGTTTCAGTTTGGTTTAGACTAAATTGATCTTTAACAGGCCTGCATTGGATCAAGTAGTTGTAGCGTTGG AGTATCCATTGACACATTTGGAGACCCTTGTACAGGGGTCACAAAGAGTTTAGCTGTTGAAGCTACTTGTGCATAG
CDS sequence (LotjaGi3g1v0161400.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGCCAGACCTTATTCAGAAATCCAAAGATGGAGGACTTGATGTGATTGAGACCTATGTTTTCTGGAATTTACATGA ACCAGTTCGAGGCCAGTATGATTTTAAGGGGAGGAAGGATTTAGTGAAATTTGTGAAGGTTGTAGCTGAAGCGGGTCTAT ATGTGCATATTCGGATTGGTCCATACGTGTGTGCTGAATGGAACTATGGTGGTTTCCCTCTTTGGCTGCACTTCATTCCG GGAATTAAGTTCAGAACTGACAATGAACCATTCAAGGCAGAAATGAAACGATTCACAGCTAAGATAGTGGATATAATCAA GCAAGAGAAACTATATGCATCACAGGGAGGACCTGTTATTTTATCTCAGATTGAAAATGAGTATGGAAATATTGATTCAC ATTATGGTTCTGCTGGCAAATCCTACATCAAGTGGGCAGCATCAATGGCTACATCTCTTGATACAGGAGTTCCCTGGGTC ATGTGCCAGCAAGCAGATGCTCCTGATCCGATTATTAACACGTGCAATGGATTTTACTGTGATCAATTCACACCAAACTC TAACACAAAACCGAAAATGTGGACTGAGAATTGGAGTGGATGGTTTCTATCATTTGGTGGTGCTGTTCCTTACAGACCTG TGGAAGATCTTGCATTTGCTGTGGCACGCTTTTTCCAGCGCGGTGGAACGTTTCAAAATTACTACATGTACCATGGAGGG ACTAACTTTGACCGAAGTACTGGTGGACCTTTCATTGCCACTAGTTATGATTATGACGCACCAATTGATGAGTATGGAAT TATTAGACAGCCTAAATGGGGCCACCTGAAAGATGTGCACAAGGCCATAAAGCTCTGTGAAGAAGCGTTAATTGCCACCG ACCCAACCATTACATCACTTGGTCCAAACCTAGAGGCTGCAGTTTACAAGACAGGATCTGTATGTTCTGCCTTTCTTGCC AATGTCGGCACCAAATCTGATGTAACGGTGAATTTCAGCGGCAATTCATATCACTTGCCTGCATGGTCTGTGAGCATCTT ACCTGACTGCAAGAATGTAGTGCTTAATACAGCAAAGATTAATTCTGCATCTGCGATTTCAAGCTTCACAACTGAATCTT CAAAAGATATTGGTTCTTCAGAAGCTTCCGGTTCAGGATGGAGTTGGATAAGTGAACCAGTGGGTATTTCAAAGACTGAT TCAATCTCAAAAATTGGATTGCTGGAGCAAATAAATACGACTGCCGATAAAAGTGACTACTTGTGGTATTCATTAAGCAT TGATCCTAAGGATGATGCTGGTGCTCAAACTGTTCTTCACATCGAATCACTTGGCCATGCCCTTCACACTTTCATCAATG GGCAGCTTGCAGGGAGTCAAGCAGGCAATAGTGACAAAGCTAAGATCACTGTGGACATCCCCATCAAACTAGCGGCCGGA AAGAACACAATTGATCTCCTAAGTTTGACCGTGGGACTTCAGAACTATGGAGCTTTTTTTGAGACATCGGGAGCAGGGAT CACTGGTCCAGTGATATTGAAAGGTTTGAAGAATGGCAAAACTCTTGATCTCTCCTCTAAGAAGTGGAATTATCAGGTTG GCCTCAAAGGTGAAGAATTAGGCCTTTCTGGTGGAAGTTCTGGACAGTGGAATTCACAATCTACCTTCCCTAAGAACCAA CCATTGATTTGGTACAAGACGAACTTCGCCGCTCCATCCGGCAGTAATCCAGTTGCAATTGACTTCACGGGGATGGGAAA AGGCGAGGCTTGGGTGAACGGACAGAGCATTGGGCGGTACTGGCCAACATATGCCTCTCCAAATGCTGGTTGCACAGACT CGTGCAATTATAGAGGATCTTATAGTTCATCCAAATGTCGCAAGAATTGCGGAAAACCATCACAGACACTATACCATGTA CCAAGATCTTGGTTGAAACCACATGGAAACACTCTTGTATTGTTTGAGGAAAGTGGGGGTGATCCAACTCAAATCTCTTT TGTCACAAAACAGATACAAAGTTTGTGTGCACATGTATCTGATTCTCATCCATCACCGGTAGACTTGTGGAACTCAGATA CAGAATCAGGAACAAAAGTAGGGCCTGTAATGTTGCTCAAGTGCCCTCATCATAATCAGGTCATCTCTTCCATCAAGTTT GCGAGCTACGGAACACCGGCCGGGACCTGCGGAAACTTCTACCACGGACGCTGCAGCAGCAATAAGGCTCTGTCCATTGT GCAGAAGGCCTGCATTGGATCAAGTAGTTGTAGCGTTGGAGTATCCATTGACACATTTGGAGACCCTTGTACAGGGGTCA CAAAGAGTTTAGCTGTTGAAGCTACTTGTGCATAG
Protein sequence (LotjaGi3g1v0161400.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWPDLIQKSKDGGLDVIETYVFWNLHEPVRGQYDFKGRKDLVKFVKVVAEAGLYVHIRIGPYVCAEWNYGGFPLWLHFIP GIKFRTDNEPFKAEMKRFTAKIVDIIKQEKLYASQGGPVILSQIENEYGNIDSHYGSAGKSYIKWAASMATSLDTGVPWV MCQQADAPDPIINTCNGFYCDQFTPNSNTKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGG TNFDRSTGGPFIATSYDYDAPIDEYGIIRQPKWGHLKDVHKAIKLCEEALIATDPTITSLGPNLEAAVYKTGSVCSAFLA NVGTKSDVTVNFSGNSYHLPAWSVSILPDCKNVVLNTAKINSASAISSFTTESSKDIGSSEASGSGWSWISEPVGISKTD SISKIGLLEQINTTADKSDYLWYSLSIDPKDDAGAQTVLHIESLGHALHTFINGQLAGSQAGNSDKAKITVDIPIKLAAG KNTIDLLSLTVGLQNYGAFFETSGAGITGPVILKGLKNGKTLDLSSKKWNYQVGLKGEELGLSGGSSGQWNSQSTFPKNQ PLIWYKTNFAAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYASPNAGCTDSCNYRGSYSSSKCRKNCGKPSQTLYHV PRSWLKPHGNTLVLFEESGGDPTQISFVTKQIQSLCAHVSDSHPSPVDLWNSDTESGTKVGPVMLLKCPHHNQVISSIKF ASYGTPAGTCGNFYHGRCSSNKALSIVQKACIGSSSCSVGVSIDTFGDPCTGVTKSLAVEATCA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 286 | 286 | 3.4E-98 | – | |
| PANTHER | 1 | 783 | 783 | 0.0 | – | |
| Pfam | 1 | 282 | 282 | 9.4E-106 | ||
| PANTHER | 1 | 783 | 783 | 0.0 | ||
| SUPERFAMILY | 1 | 287 | 287 | 5.63E-95 | ||
| PRINTS | 2 | 20 | 19 | 9.8E-70 | ||
| PRINTS | 57 | 76 | 20 | 9.8E-70 | ||
| PRINTS | 114 | 129 | 16 | 9.8E-70 | ||
| ProSitePatterns | 116 | 128 | 13 | - | ||
| PRINTS | 193 | 208 | 16 | 9.8E-70 | ||
| PRINTS | 230 | 245 | 16 | 9.8E-70 | ||
| PRINTS | 250 | 266 | 17 | 9.8E-70 | ||
| Pfam | 290 | 360 | 71 | 1.5E-24 | ||
| SUPERFAMILY | 344 | 516 | 173 | 2.31E-21 | ||
| Gene3D | 358 | 515 | 158 | 4.1E-10 | ||
| Gene3D | 516 | 676 | 161 | 3.6E-16 | ||
| SUPERFAMILY | 528 | 693 | 166 | 4.13E-29 | ||
| PRINTS | 560 | 574 | 15 | 9.8E-70 | ||
| PRINTS | 587 | 603 | 17 | 9.8E-70 | ||
| Gene3D | 696 | 784 | 89 | 8.5E-14 | ||
| ProSiteProfiles | 698 | 784 | 87 | 16.324 | ||
| Pfam | 706 | 783 | 78 | 4.1E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi3g1v0161400.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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