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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0170300 |
| Transcript ID | LotjaGi3g1v0170300.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuolar protein sorting-associated protein 41 like; TAIR: AT1G08190.1 vacuolar protein sorting 41; Swiss-Prot: sp|P93231|VPS41_SOLLC Vacuolar protein sorting-associated protein 41 homolog; TrEMBL-Plants: tr|A0A151TNJ4|A0A151TNJ4_CAJCA Vacuolar protein sorting-associated protein 41 isogeny; Found in the gene: LotjaGi3g1v0170300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:23249341..23259858) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTCCGATTCCCTCCGAGAACGGCGTCGAAGGCGACGATGAGAGAGAAGAAGAAGAGGACGAAGAAGAAGATGAAGA AGAAGACGATGAAGGCGTAGATGAAGAAGAGGAAGAGCCACGGCTCAAGTACCAGAGAATGGGAGGAAGCGTACCTTCGC TTCTAGCCAGTGATGGAGCGTCTTGCATCGCCGTCGCCGAACGGATGATCGCTCTCGGTACTCACGACGGCGTCGTTCAC ATCCTTGATTTCCTCGGGAATCAGGTTAGCTACCGTTCTCTCTCATTCGTCACCTAATTTTATAGCCACTCTTATTATGC ATCAATTTTCGCGAATCAATGTTTCCGTGAAAATCCAGCTTCTAAATCAATTATAGATTTAGTTTACTTTGTAGAAGCAT TGTTAGAAGTCGCACATTGGCTAGAGATAAGACATATATAACCTTTATATAGGATAGAGCAACAGTAAACTGTTGAGTTA GACCGCCCAAATTCTAATATAAATACAATATTAGTTTCTCACGTTAGAGAAGACTTGTTGTAGGTGATTGGTTTTAGGTG TTGATGTGTTACGGGTTAGGTTATAATCGGCGTGGCGGTGTTTAATTGATATGATTTTTGAGAAACTTGTTATAATGAGT CATCTAATTCCAGGTGAAAGAATTCGCTGCTCATGTTGCGGTTGTGAATGACCTCAGCTTTGATAAAGATGGTGAATATA TTGGAAGCTGTTCGGATGATGGATCGGTTGTAATAAGCAGCCTCTTTTCTGATGAGAAGATGAAGTTAGAGTATCATCGC CCTATGAAGGCGATTGCTCTGGACCCGGATTATGCTAGAAACACGGCTAGGAGATTTGTTGCTGGTGGTTTAGCAGGGAA TTTATATTTAAATTCAAAGAGATGGTTAGGATATCGTGACCAGGTTTGTCAGATTCTTCTTGCGTTTTATTGATAAACTC TCGGTATTCCACTAGCGCTGTGAATTATTGGCTATAAAAATATCTCGTTCTCTGAAAACAAAAAAGGTTTTGCACTCTGG AGAAGGTCCAATACATGCAGTGAAGTGGAGAACAAGTCTTGTTGCTTGGGCAAATGATGCAGGAGTGAAGGTTTATGATA CTGCCAATGACCAACGTGTAACATTTATTGAAAGGCCACGAAGTAGCCCTCGACCTGAGATTTTGGTTCCTCACTTGGTT TGGCAGGTTAGTGAAATATATATGCAGGCTTGCTTTTTGGTTATGAAATACCAGAAGCAGTGTCCACTACTATGATTAAA TTGAAGGCTTTTTTGATGCTCTATACTGCTGTGGTTACATTTTATTTGTCCTCGTGTCATTTCTTGATTGGACTGCTTTA GTTTAAGCTCCTTTCATATTTTACAGGATGACACCCTTTTGGTAATAGGCTGGGGAACATCTGTAAAAATTGCTTCGATA AGGACAAACCGTCATCAAGCCGTCAATGGGACGTACAGGCAAGTTCCTTTGTCTGGAATGACCCAGGTGGATATTGTGGC ATCTTTTCAAACTAGCTATTTCATCTCAGGAATTGCCCCCTTTGGTGATGCTTTGGTTGTTCTAGCATATATTCCTGGAG AAGAAGATGGAGAAACGGATTTTAGTAGCTCTGCTCCTTCACGGCAGGTATATGATATTATCAAATGAAATTATTTAACT TCTCACACTGACATTGCACGGCACCTGTAATACTCTACCCCCACTTTTACTATTTCCTAAGCTACAACTACTTTTCTTCA TTCATTCTTTCTTATACATTCTAATGTTATTACATTATTTAGTCCGGTATGTCTCATGAATGTGTTATGTCATCTTTGCA TTTTCTTGATAATGCTATTGCTATCATTATGTTGGTAAATCCGCAAGTGTACGAATCCACCCGGTTTTAAATATCGAACC ACAGGGATTGTGAGTGACTAAATTCAGTTTAAGCTTTGAGTTTGAAGGTTGGTTTTATTGAGGCAAACATATGTTAAAGT AGTAATAAGGAAAAAGAAAATATAAATACATAAATGAAACAGAAAATGAAAAGAAAGAGTGATTTACTTTGGGTTCTTGC TCAACTAATCAATTCAAGCACATCATTCTAAGCACATGTTCTCATGAATCTCTCCTTGATGTTATAGCCTAAGCAACTAC CTATCGATGCCTCGCATAGATAATTCTTTCAAACCAAAAGATAAGCCCAATTCCTTGTGTACTTAAACATTTGTTTGAAG CATAAAGATTATAAAGTTCAGGCCAACAAACCCCAACCCTTCCTCTATTCCTAGTAGCAAGTATAGAAGGGACAATCCCA AATCAGTTCCCTAATCTATAACAAACTTCCGTTCTGATTATAGAAAAGTATAAAGCTAGCACATGTTCTAACTTGAAACA TAAAGCATGGATATGAGATTCAAGGAAAGAAGAAGAACATGTGGGATAGAACTTAAGATTATAACTCAAAAGGAAAAGTC TTACAAGAAAACCAAAGTAAAAGAAGAGAGATTAGCCAAGCATGGCAAGAACCATGCTTGGCTAAGAACCTTGAACACAA GCTTGGAAGCCTTCTCTCACTCTCCTAGATGATCCTCTACCTCTGAATTTTACAAAGTATGGAAAGGTATCAAAGATTAC AAAAGAAAATGACTAAAATCCTATTTATAGGCAAAATAAACGAGGCTGAGCTGTTCTGGGCGCTCAGGCGCCAATTCAGA GCGCCTGAGCGCCAATTGCATGTTGAAAAACATGCCTCTGGACCTAATTGGCGCCTAGGCGCCCATTCCCAGCGCCTAGG CGCTTAAGCTCGCCTGAAAAAGGACTTTTTGGCTTCTGAAACTCCTCTTTTCAATCCTCTTTAAGTTCTCCATCAATTCC ATGCTTCTTGGCCTTCTTTCTCCTTCAGTTTCTGCTCTCCAAACCTAACCAACAAGTCAAGGAAGATTCTAGAAGCTCCA AGAGCTCATTAGCACAAGAGGTCCTTCATAAAACAAAAGAAAATCATGCAAGTCCTAAACTTAACTTAAAATGCAAAAAA ACTCCCTATAAAACTACAAAATTACCAAAACAAAACAAAGACTCAAGAAAAGATAAAAATGCATGAGAATGCATGAAACA CTACATGAGACACAAGAAAATGACTCAAAACCCACAAGGAAAACCCTAAAAACATCATATAAACCCGGGTCATCACATTA GATGGATAAAACTTTAGAGAATGTTTAGCGCTAACTTTATGTGTCAATGGCACTTAGATGTGGAAACAATTTTGTACTTA ATTAATATATGAATCATAAAAGGAAAAGAAAAGTAAAGCAATACTTGCATTGTCCTCTTCATATTATATTGAAAATTGAT TTGTTCTCAAGATAAGTGTAATTTTAAACAGGGTAATGCACAAAGACCAGAAGTACGGATAGCAACACGGAACAATGATG AACTTTCAACAGATGCTCTACCATTACATGGCTTTGAGCATTACAAGGCAAAGGACTATTCTCTTGCTCATTCTCCCTTT TCGGGTAAACTCCTGTTTAGCTTTTTTTTCTCTTTATGATCTATGTTTTATGTATGCAATGGTTCTGCATGATTATAGAC TATAGTTGCTTGTTCATTCGAATGTAGGTAGCAGTTATGCTGGTGGTCAATGGGCTGCAGGTGATGAACCAGTTTATTAT ATTGTATCCCCAAAGGATGTAGTTATTGCAAAGCCAAGGTTGATGTCAACACCACAACTTCTTGATCCTATTGTATTGTT CTAAGTGATTGATGCATTTGTGTTGACTTATCACAAACAATATTAATAAGAAAAGAAGGATGCTATGTTCTCAATTGACT TCATTCTACTGTCTTGAAATGCTTTTTTCTGCTCTGGGTAGGTGATTGAGGGGAAAATGGTTTTAAACCTCAATACTTCA TATCATCCACCTATTGTGATAGATATTGTATTTAGAATTGTATATATTTCATTAGTTACTCTTGCCAGCTGACTGCTTGG CATGGAAAATGTTAGTATTTAAGATGCTGCGATAGGTTTCGATGTTCAACGTTATTCAGTTTATCAGTGTTTGTGATATT TCTGTTTATTTCGTTTAATGTCATAGAATGATAATTGAAGAAGTCGGTATTTGTTACTCATTTTAATCAAGAAAATTCAG ATGCCTTAAAGTGGCTGTAGAGAAAGTGCCATGTTTTTCCCTATGCCAGTGATCCTTCTTTATTTGTTATATTCCTTTTG ATAGGAAATCAATCTATGTTGTCCTGAAGGGACTAGGAAAGTCAAATCAAAACTAAAAGAAGGCTGCAATTTATCTTAAG TTTCTTATATGCTATTTTTATAAGTTAGTATACAAATTAGAAAAAAGTGAATAAAAAATATGGGTAGAATTTAATGCATT TTAATAATCAGGGACGTTGAAGATCATATCGCTTGGCTTCTTCAACATGGGTGGCATGAAAAAGCTTTGGCTGTGGTTGA ATCTGGTCAGGGGCGGAGCGAACTAGTTGATGAGGTATTTATCTTAATTCCACTTTATTATTATTATTATCATTAGTTTT ATTATTATTATTATAGTTAGATGTATGCTTGTAAATTAAAAAAAAAAGGTGAGCGTTTAGCACATAACAGTGTAATAAGG TTCTGCATGTGTGCTCATTGAGGCACTCAATTCTGTGTATGCAAAGTATAGGATTGCGTGTATGTGAAGTTTCCTGAACT ATATAGTTTTCCAAATAATGTCATCGATTATTTTCTATCTACAACAATGTATAATAGTTGACCCAAGATGCAAGCTCAAA AGGAAATGAAATGAAACCTACAATTTTATATACTTGGTAAAATTTGGTTTCATTTTGTTAATCGTCTGTACCTTTATCTA TGGAGATTGGAGAAAATTAAATTGATTCAATCAGTTTTGAAGCTTGATTGACCATTTTTTTTCTGTAGTTTCTTAATTGA CATTTTATTATCATGCTAACGCTAATATTTCTTGAATCATAATCACTCTACATGGCATATTATATATGTACGAATGTACC TATGAATTGTTCTTGGTGAATTTGTCCATCTGAGTGCAAGTGCATTTTATCTTTGCAGGTGGGTTCTAGATACCTTGATC ATTTGATCGTGGAAAGAAAATATGCTGAAGCAGCTTCTTTATGTCCAAAGTTGCTTCGAGGATCAGCCTCAGCATGGGAG AGGTACCAGTACCACATATGCGCAGTTGTAGTCTGTTGTACAGTTCTTGAGTCAGTTGTTTGGTAATTGAATGTCAATGT ATTGCTTTCAACAGATGGGTTTTCCACTTTGCACACCTCCGCCAACTCCCTGTTTTGGTTCCTTACATGCCTACAGAAAA TCCTAGATTGCGTGATACTGCTTATGAGGTTAGCCGAAGCCTTTAAACAAAGCAGTCACTGATAACTAATGTTTCCCTGT TGTATCTTTAATCTTCGGACTTGGACCTTAATCTTTTTTTTTTCCTACAGGTTGCTCTAGTTGCATTGGCTACAAATCCT TCTTTTCATAAGGATCTCTTGTCCACTGTTAAATCCTGGCCTCCTGTAATTTATTCTGTAATGCCTGTTATTTCGGCTAT CGAACCTCAGCTGAATACTTCATCCATGACAGATCCACTCAAGGAGGTTAGTTTGACTATATATATTTGCATTATGAATC TCTAACACACTGTTTATATTAACATGTTCATTTTCTATGTCAGGCATTAGCAGAGCTGTATGTAATTCATGGGCAACATG AGAAGGCCTTCTCGTTGTATGCTGATGTAGGTGGTCGTAATCTTAACTAATTTTTGTTGTGCTCACAATTGTATTGATTG AATGTTGTACAAGGGAAATGCTAGCGACACACTCTTCCAATCACACTCTTCAACACGCTCCATGTGCTTGGTTTATTTTT TGAAAGGTCTAACACAATTTAAAAAAAAAGTAGACCTGGACTTTAAAAAAAAAGATCAACCATAGGAGTTGTGTGATAGT GTTTTAAAAGAGTGTGTTGTATACATTGCTTTGATAGTAGTCTTACTTCCTCCCTCTTTTCCTGTTGAAATTTCAGCTCA TGAAACCAGAAGTATTTGACTTCATTGATAAATATAATCTACATGATGCAATTCGTGAAAAGGTATGATAGTAATTCTTG AAGCATAATTTATCTTGGAATTCTCCAATCTTTTCTTTGTAGTTTGTAGCGTAAGTTGATGCCCAAGCCCCAAAACATAC TGTGTCACAGTTGGCATTTGATTTTAAGAAGTTATTTTGTGTCATTATTGCTATTTGGTTTTAAGCATTAGTGCATCTAA AGAATCTTATTACAAGTACCAGTGTAGTATATTATGATCAAGTTATTTATGTTGACACATCTCTTAGGTGCTATTTGGCA CATTGAGTTGGACCGACCAATTCTATTTATCTTGTTCGGCTTTTACTTTAGCACAGAAAGGCCAAATCAATGGAATTGAT ACTATTTTGAGTATTGTCTATTCTTAGCCTAGTTGTGTTACAGTTCCAATTTCAAAGGTTAAAACTTAAAACTATTTCAT TGAGTGTTTTTTATCTGTCGCTGCATACCTTAGCAACCATTGCTGATGGAATGCTCTAGCTACCTTTATTTTCCAGTGCT GGCCAAGTGCCAGTGCTGACAGCATCCTCCAATCACTGTCATCACCAGCACCCCCCTTCATCATTGTGACCAACATCTTA TAATTACCGTTGTTGCTTCTGTCCTTAGATCGCTTGTGTCCTCCAATCACTATGAAATAACACTTATAAACTTTGCTTTG TTGGCTTAATGAGTAAATAATAGTTTGATATCAAAAGTACTTCTGTTACTGTTAGAAGCATACTGTATCCTCAAATATGA TTTTATGACCATTTGAATATTATTTGTCTAACCTGTGCCTTCAGGTTGTCCAAGTGATGATGCTTGACTGCAAGCGTGCT GTTCCTCTATTAATTCAAAATAAGGACTTAATAAGTCCCCCTGAAGTTGTGAAGCAGCTACTAGATGCTGATATTAAGTG TGACTGCAGATATTTCCTACATTTATATCTCCATTCATTATTTGAAGTAAATCCACATGCTGGGAAGGATTTTCATGATT TGCAGGTTGTAAATCCACACTCAATGCAATATATATATGTATATATGTATGTATGTATGTATTTAGAATCGATGAAAGCC ATGTGTTTATCATAATGAGTTCAATCCAAAGTAATTGCTGCCTTTATTTCTTTTATTGAATATGAGCGAGAGACAGTCCT AGGCAAGGAACAGCTGACTTTTTTCTATATTCTAACACAACAACGTAAAAAGGTTGAAAGGGAAATCCTAATGAATCATG GGATTTGACATTAGTTTATTTTGTTTAATGTGAAGGCAAAGTGCTTTGTATAAATCTAACTTGTGTGTATCAGAAATATT AGTGAATGATATTTTCATATTCTTCCGTTTGAGAGTTTTCTTTTCATGTGCGACCTCTGATTAAATGGTTTTTTCTCAGC TAATATCAACCTGTTGTCTACTACATAGGTAGAACTCTATGCAGACTATGATCCAAAGATGCTGCTACCTTTTCTTCGAG GCAGTCAACACTATACCCTTGAGAAGGTTTGTGATCAACCAAATGACCTTAGTATTTATATATTTGCATATGGCATACCT ATGAACCAACTATGAACCAAAGTGTCCAAAATGTTTTTCAGGCTTATGAAATTTGCGTTAGGAGAGACCTAATGAGAGAG CAAGTCTTCATCCTTGGAAGGATGGGAAACTCAAAACAAGCCCTAGCTGTTATTATAAATAAATTAGGGGACATAGAGGA GGTATTTCATCTTTTTCTTTTATGGTTTTTGGTTTCAACCGTCTTGTAATCATGAATCAAAACTTAAATGGATCTAATGT TGAGTTGAAGTGATCTTAATTTTGTGCAGGCTGTAGAGTTTGTGACCATGCAGCATGATGATGAACTTTGGGAAGAACTG ATCAAGCAATGCCTTCACAAACCTGAAATGGTATATCTTGATAACTTATTGTATATTTATGAATTCAGGCCAGTTTGATT ATTTGTTTTCAAGATAGGTTTATGTTTTTGAATAACGAAAACTGTTTGGGAGTTGGTTCCTATTCCATATTTTAAAGATT CGGAACACATCAACTATTTTGAAAACCAAAACCAGGAACATCTTTTGGATGTTCTGACTTTTTTTTCTTTTTCAAAAATG CTGTTGCAATTTTTATAAACATCTCATTCATTTTGAGCAACCTATTCTCTTACTGTGTGTTTTACCTTCATTTCAAGTCT CTTTGCTAGGGCACTTAAATTTTTTAAGGAAGCTGGTATTTTAATAAAAAGAATAGGAAAAATCTCCCCTGGTTACTACA GTATAGATCTTTGAGGGTTGGCACCTACCTGCCCGAAGACCTCAATTCTCACACAAATTCGTTGATGGTTTCACTCTCTT TGCTTCTATTATTTATAACATACTATCTTTTCCAAGTTCTCCTATTTTATCATATTCTTAATAATCCTAAATTCACTATA AAACAATGCTTTTATAGTTACTATTACTAACTTACTATATTTAATAATATATACTTCTAATAACTCTCAAATGATTCTCT TTTAATAACTAAATTTAAAAATTTAACAATATCTACTTCCAGTAATTACGTTAAAAAAAATTACTTCCAGTAATTCTGTT TTGGAATTATTCTCTCCTAATTACTATATCTCTAGACTCATCCTTATTTCTCTTTTTATATGCTTTCGTAATAAACCTCT AATTAGCTGACACGTGTGTGCTACCTTTGTCAAGTCAAGGATTGCTTCTTCTGCATCACAATGCATGCTATTGTGACGAC TATCACATGACAGCACACCGTCTCTTGTCTCACCCTTTTCCTATGCTGGCCCCCCCACCCCCACCCCCCCACCCCCCGCC TCTTTTAATTTTGAAGATGCTTCCAGATAAAGCATGGTCACGCTTAAAGATGGTCACATTGAGCATCTACAGTGAAATAT TTTTGGTCACTCTGCCTTTTGAGATTCCCTCCTTTTTGATAGAAGAGAAAACATAAACTGAACTAAAAGATTTAAGAGAA ATAACTGTATCAACGAATAGTTATATATACATACATTGAGTGCTAACAGACTCTAACTAACATGGTGTAACTGTATGCTA ACAGCTAAGCTTAACCAACTCGAGCACTTAGTGTGTAAAAGGCTTTTAATGTTGTCTGTGCTTTTTTAGATGGAAAGTCT CTGGACAAGTCATTATTTTGAGGGAAAAAAATGTGTCTTATCAAGAGCAAATTTTCCAAAAAGATTTTTAATTGTTTTTA TTTTCAAAGTTGTTCCTAAAATCTTAATATATTACAAAACTTTGTTTACAGTGATAGAATTTACATGAGTTTTAAAAACA AAAAAGCTGTGACAGAAACAGATATACCCACCCAGTCTTTACCTATTTCGTATACCAGCTCTTTCTTAACTTGGTTCTGA GATGGATTCCTGTAATTGACAGGTGGGCATACTATTGGAGCACACAGTTGGAAACCTTGATCCCCTCTACATTGTAAATA AGGTTCCCAATGGGATGGAAATACCTCGGTAAGCAATAGATATGACTTAAACAGCAATTACATTCATCTAATCATAAAGC ATATCGGACGAATAAAGTTAATCACATTTGGATTGTAGATTGTATTTAGTAGGACATGCCTGTTTATAATTATGTTTATG CATATGCATGTTGTTGTTCACCATTTCTTTCATTTTAACTATTTGCTCGGATAGTTTGATCGTTCTTGCTTCCCAATTCC AGCTACATTTTGTAATTAGTAGCATTGCGTTATTCACTGTAAGAGTATTTTCTATATCTGCTTTTCTACAGGCTCAGGGA TCGGCTGGTAAAAATTATCACTGATTATAGGACTGAAACATCACTTAGGCATGGGTGCAATGATATCCTTAAGGTACTTT CTCCACCACTCCTTTCTTAGTACAAGGGAAACGTTTTTTTATCTTATTAATTTGATGACATAAGATACCCTTTGCTCTCA TTAAAACAGGCAGACTGTGTCAACTTATTAATTAAGTATTACAAAGAGGCAAAGCAAGGAATATATTTAAGTAATGAAGA AGACGAGCCGCGAGCTAAAAGAGCTTCTCAGATGTTTGAGAAATCCCCGAGTCTGAGAACCATGGAAGTGAAATCAAAGA CTAGGGGTGGGGGAAGATGTTGTATATGTTTTGACCCCTTTTCTATACAGAATGTATCAGTCATTGTTTTCTTTTGCTGT CATGCTTATCACACAACTTGTCTTATGGATTCTTCCTACACTAGTAGTAGCAAGAAAGATAATGGAGCCACTTCCCGAGA GACAGAAACATATGATGCTTACAATGGTTTTGTTGATGATAGTAGTGATGAAGAGGAAGAGACGGAGACAGGTGGCAGTC GAATGCGTTGTATATTGTGTACTACTGCTGCTAGTTGA
CDS sequence (LotjaGi3g1v0170300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTAGAGTATCATCGCCCTATGAAGGCGATTGCTCTGGACCCGGATTATGCTAGAAACACGGCTAGGAGATTTGT TGCTGGTGGTTTAGCAGGGAATTTATATTTAAATTCAAAGAGATGGTTAGGATATCGTGACCAGGTTTTGCACTCTGGAG AAGGTCCAATACATGCAGTGAAGTGGAGAACAAGTCTTGTTGCTTGGGCAAATGATGCAGGAGTGAAGGTTTATGATACT GCCAATGACCAACGTGTAACATTTATTGAAAGGCCACGAAGTAGCCCTCGACCTGAGATTTTGGTTCCTCACTTGGTTTG GCAGGATGACACCCTTTTGGTAATAGGCTGGGGAACATCTGTAAAAATTGCTTCGATAAGGACAAACCGTCATCAAGCCG TCAATGGGACGTACAGGCAAGTTCCTTTGTCTGGAATGACCCAGGTGGATATTGTGGCATCTTTTCAAACTAGCTATTTC ATCTCAGGAATTGCCCCCTTTGGTGATGCTTTGGTTGTTCTAGCATATATTCCTGGAGAAGAAGATGGAGAAACGGATTT TAGTAGCTCTGCTCCTTCACGGCAGGGTAATGCACAAAGACCAGAAGTACGGATAGCAACACGGAACAATGATGAACTTT CAACAGATGCTCTACCATTACATGGCTTTGAGCATTACAAGGCAAAGGACTATTCTCTTGCTCATTCTCCCTTTTCGGGT AGCAGTTATGCTGGTGGTCAATGGGCTGCAGGTGATGAACCAGTTTATTATATTGTATCCCCAAAGGATGTAGTTATTGC AAAGCCAAGGGACGTTGAAGATCATATCGCTTGGCTTCTTCAACATGGGTGGCATGAAAAAGCTTTGGCTGTGGTTGAAT CTGGTCAGGGGCGGAGCGAACTAGTTGATGAGGTGGGTTCTAGATACCTTGATCATTTGATCGTGGAAAGAAAATATGCT GAAGCAGCTTCTTTATGTCCAAAGTTGCTTCGAGGATCAGCCTCAGCATGGGAGAGATGGGTTTTCCACTTTGCACACCT CCGCCAACTCCCTGTTTTGGTTCCTTACATGCCTACAGAAAATCCTAGATTGCGTGATACTGCTTATGAGGTTGCTCTAG TTGCATTGGCTACAAATCCTTCTTTTCATAAGGATCTCTTGTCCACTGTTAAATCCTGGCCTCCTGTAATTTATTCTGTA ATGCCTGTTATTTCGGCTATCGAACCTCAGCTGAATACTTCATCCATGACAGATCCACTCAAGGAGGCATTAGCAGAGCT GTATGTAATTCATGGGCAACATGAGAAGGCCTTCTCGTTGTATGCTGATCTCATGAAACCAGAAGTATTTGACTTCATTG ATAAATATAATCTACATGATGCAATTCGTGAAAAGGTTGTCCAAGTGATGATGCTTGACTGCAAGCGTGCTGTTCCTCTA TTAATTCAAAATAAGGACTTAATAAGTCCCCCTGAAGTTGTGAAGCAGCTACTAGATGCTGATATTAAGTGTGACTGCAG ATATTTCCTACATTTATATCTCCATTCATTATTTGAAGTAAATCCACATGCTGGGAAGGATTTTCATGATTTGCAGGTAG AACTCTATGCAGACTATGATCCAAAGATGCTGCTACCTTTTCTTCGAGGCAGTCAACACTATACCCTTGAGAAGGCTTAT GAAATTTGCGTTAGGAGAGACCTAATGAGAGAGCAAGTCTTCATCCTTGGAAGGATGGGAAACTCAAAACAAGCCCTAGC TGTTATTATAAATAAATTAGGGGACATAGAGGAGGCTGTAGAGTTTGTGACCATGCAGCATGATGATGAACTTTGGGAAG AACTGATCAAGCAATGCCTTCACAAACCTGAAATGGTGGGCATACTATTGGAGCACACAGTTGGAAACCTTGATCCCCTC TACATTGTAAATAAGGTTCCCAATGGGATGGAAATACCTCGGCTCAGGGATCGGCTGGTAAAAATTATCACTGATTATAG GACTGAAACATCACTTAGGCATGGGTGCAATGATATCCTTAAGGCAGACTGTGTCAACTTATTAATTAAGTATTACAAAG AGGCAAAGCAAGGAATATATTTAAGTAATGAAGAAGACGAGCCGCGAGCTAAAAGAGCTTCTCAGATGTTTGAGAAATCC CCGAGTCTGAGAACCATGGAAGTGAAATCAAAGACTAGGGGTGGGGGAAGATGTTGTATATGTTTTGACCCCTTTTCTAT ACAGAATGTATCAGTCATTGTTTTCTTTTGCTGTCATGCTTATCACACAACTTGTCTTATGGATTCTTCCTACACTAGTA GTAGCAAGAAAGATAATGGAGCCACTTCCCGAGAGACAGAAACATATGATGCTTACAATGGTTTTGTTGATGATAGTAGT GATGAAGAGGAAGAGACGGAGACAGGTGGCAGTCGAATGCGTTGTATATTGTGTACTACTGCTGCTAGTTGA
Protein sequence (LotjaGi3g1v0170300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLEYHRPMKAIALDPDYARNTARRFVAGGLAGNLYLNSKRWLGYRDQVLHSGEGPIHAVKWRTSLVAWANDAGVKVYDT ANDQRVTFIERPRSSPRPEILVPHLVWQDDTLLVIGWGTSVKIASIRTNRHQAVNGTYRQVPLSGMTQVDIVASFQTSYF ISGIAPFGDALVVLAYIPGEEDGETDFSSSAPSRQGNAQRPEVRIATRNNDELSTDALPLHGFEHYKAKDYSLAHSPFSG SSYAGGQWAAGDEPVYYIVSPKDVVIAKPRDVEDHIAWLLQHGWHEKALAVVESGQGRSELVDEVGSRYLDHLIVERKYA EAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVALVALATNPSFHKDLLSTVKSWPPVIYSV MPVISAIEPQLNTSSMTDPLKEALAELYVIHGQHEKAFSLYADLMKPEVFDFIDKYNLHDAIREKVVQVMMLDCKRAVPL LIQNKDLISPPEVVKQLLDADIKCDCRYFLHLYLHSLFEVNPHAGKDFHDLQVELYADYDPKMLLPFLRGSQHYTLEKAY EICVRRDLMREQVFILGRMGNSKQALAVIINKLGDIEEAVEFVTMQHDDELWEELIKQCLHKPEMVGILLEHTVGNLDPL YIVNKVPNGMEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLIKYYKEAKQGIYLSNEEDEPRAKRASQMFEKS PSLRTMEVKSKTRGGGRCCICFDPFSIQNVSVIVFFCCHAYHTTCLMDSSYTSSSKKDNGATSRETETYDAYNGFVDDSS DEEEETETGGSRMRCILCTTAAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 779 | 779 | 0.0 | ||
| PANTHER | 1 | 822 | 822 | 0.0 | – | |
| PANTHER | 1 | 822 | 822 | 0.0 | – | |
| MobiDBLite | 184 | 211 | 28 | - | – | |
| MobiDBLite | 186 | 211 | 26 | - | – | |
| Gene3D | 410 | 688 | 279 | 2.8E-23 | ||
| ProSiteProfiles | 481 | 628 | 148 | 39.588 | ||
| SMART | 481 | 628 | 148 | 7.0E-37 | ||
| Pfam | 481 | 624 | 144 | 5.2E-22 | ||
| SUPERFAMILY | 737 | 775 | 39 | 1.77E-6 | – | |
| SMART | 738 | 818 | 81 | 8.3E-4 | ||
| MobiDBLite | 770 | 810 | 41 | - | – | |
| MobiDBLite | 770 | 789 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
| Biological process | Intracellular transport | The directed movement of substances within a cell. |
Expression pattern of LotjaGi3g1v0170300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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