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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0172000 |
| Transcript ID | LotjaGi3g1v0172000.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT3G44820.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q9FYC8|Y3482_ARATH BTB/POZ domain-containing protein At3g44820; TrEMBL-Plants: tr|I1MS75|I1MS75_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0172000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:23675076..23679762) extracted from Lotus japonicus Gifu genome v1.2.
GTGGGAAAACAGAGTGTGACTGATGAGAAGGGGGACAAAAAAAGAGTTCCACGACACATCACACTCATTTATTGACCTTG TAATGTTCTTCTTAACCCCAACGACGCTCCTCACAATGTTGTTGTTTCTTTTCTTATCTCTTCCATTCATTCATGATTCC CCAACATCATTTGATCATGCTTTTGTTTATTAAGACACTCACTGCCGCTCCTTTTTCTTTTTCGAATTTGCTTTTACTTC ACCATCACCATCACCATTCACCGCTTCATTCAACCGTCGTGATCGCTGCCAGCGTCATTTTCTGTTCCATTTTTAATTCA AACCTTGTTGTTCCTTTCCTATGATTGCTCTTCTCTGAGCTTTGTGTTCTCTTTGTACTACACTTTGGTTGTTGGGTTTT TTTCCATATTTAAACTAGTAAAGAGTAAAGACACACTGTTGTTGCTGTTGTTGTTGTTGTTGTTGTTGGGTATTCTGATT CTCTTTTTCTTTTTTGCTGTCTACCCTTTTTCTCTTTTGTCCCCCCATGTGTTCTCTTATGCAAGAGGCAACGATTTAGG CCAAAAAATGCTGTTGGGGTGGTAGAGTAACAATAAAAATTGAGTCTTTTCCTGTTGACCATGGCTCCAGCTGGGAAGCT TTCTGGGTTTCATCGAGAAGGCGATGATTGGTATTGCCTCTATCAAAAGTTTCTGTTTTGAATTTCAATTTTGAATTTTT TGTTCAGCTGATTAATGGGTGGAGTCCAGCTCAGACATGCATTTCTGTAGTTTTGAAAGAGATGTTTGAAGTTTGATGGG ATGCTTTTTTTTGGTTTGTGGTTTTGGTAGGTTCTGTGATACTGGATTGCCAAGTGATATTGCTGTTTCCATTGAGGGTG TCACTTTCCATCTTCATAAGGTATGTGGCTGTGTCCTCCTTTCTCAATTGTTCTCTTCTCTCCACCAAATGGTGAAATAG TTGTTGGCCTGTAATTTTTGTGGTTCTAGTTTATCCTACTACTTTTTGCTGTTTTGTGCAGTTTGGTCCAACACAATTAA TATGTTTATGCTTTTGCTTTTGCTGTTAGTATGTTCCATCTTTATTGTTTAAGTGTAGATACTAAGCATCCTTCTTCACA TAAGGGAGCTGCATTCTTAATTTCACTAGACACAATAATTCTCTGTACAATAAATAATAATACCAGTTTATCCATAACCT TGTGGATCTTCCTATGCTGGAACCTATTTGTATGGTTCTCAAAGGCTGTGGCCTATCTTGTTTTTGATTTACTTTAAGGC TTAAATATTGAAATTCCTGCATCTTAGTCTTAGTTGAGATAAGGTAGGGACAGGCCTATCTTAAATTCTTAAATGTGGAC TGTATTTCAATTCATCTGGTGTTCATATGATGACTATAAAAGATTGCTTTTAGATGATTGGTTGTATCTTGGTGTGTGCG TCCATCGGTGCAGACTTGTAATTAATGGTGCTTGACATAGCAGTTAGTAATCAAACTAAATTTTTTTTCTAGTTTTGCCA AAGGCATCATCATCTATGCTGATGTATTAAACAAAACAACTTCAGACACATTTGATTCACAAAATTTGCTGTTTTGGAAG TTATGCTGCTAGATGAGGTCTATGACATGCCGTAAACTCTTGTTCCTGCTGTGTCATTTATTTTTCTAGGTCCTCCCTCT CAACAGACTCAATAGGAAAAAGAAAGTGTTTTGAGAGAGCGGAGAAAATTTACCTGGGAGCTGGTGTTTCCCACATTTCA ATTTTGACTTCATGCGTAAATGCGCAGTTAAATAACAGACATTTCTGTAGTACAAAATTTGATTTTATGTCAGTGGTACT GTTATGCTTTTGTTATGAAAAATTATTAGTTATACTGTATTTGAGTTTGAGTAAGATTTTCCATGGAACTGCAGTTCCCT CTTGTATCAAAATGTGGAAAAATTGCTCGGGCACATGAAAAGTCCAAGAATACCCATGAGGAGACACTCGCAATGGTGCT GGAAGAATTTCCTGGTGGTTCGGACACTTTCTTATTTGTGGCCAAATTCTGTTATGGGTTTCGTGTGGAACTGACTGCGA AAAATGCAGTTCTGGTCCATTGCGCTGCAGAGTACCTGGAAATGACAGATGAATTTGGAGAAGATAACTTGTTGTCGAAA TCAGAGAGCTTTTTCCATAAAAATATACTGCGCAACTGGAAAGATTGCATTTTGGCTCTCCAAAGTTCCGAGCCTGTTCT ACCAAGAGCTGAAAGTCTTCATTTAGTGGGCAAGTGTTTAAATGCTCTATCTATGATGGCTTGTACTGACCCAAGTTTGT TTGGATGGCCCATGATGATGTACGGGAGTTTTCAGAGCCCTGGTGGAAGCATTCTTTGGAATGGTATAAACACCGGTGCT AGAATTCGGAGCGCAGAATCTGATTGGTGGTTCGAAGACATCTCATATCTCAGTGTGAGTTTGTTTGAGAGGCTTATTAA GACGATGCAAGCGAGAGGTATAAGACCTGAAAACCTGGCAGGTGCCATCATGTACTATTCTAGAAAGCACTTGCCCGGTC TGAGTCGGTGGCAGGGTGGCCAAGGCGGCAAAACCCGGACAGTTGTGAGTTTCAGCTTGACGCCTGCTACTACTGTTGAT CAGAGGGTTCTGTTGGAAAGCATTGAAAAGCTTCTTCCTGAAAAGAAGGGAAGATCCTTTTGTTGCTTCCTACTTGGACT TCTAAGAGTGGCTTTGATATTGAATGTCAGTCAAACTTGCAAGGATTCTTTAGAGAGGAGGATAGGGATGCAATTGGAAC TGGCAACTTTAGATAGTCTTCTGATTCCTACGTATTCAGATTCTGATGCATTATATAACACAGACTGTATTGAACATATA GTCCAGCATTTTATACGTGCAGAATCAAATTTAACTGCCTTTTCTCCTTCATCACTTGACCAGCATGCGTCGTCTCCTTC ATCTGAATCATCCAAAAAAGTGGCAAAGTTGATAGATAGCTACATTGCAGAAATTGCTTCTGATGTTAATTTAAAACCAG GAAAGATACGCGCTCTTGCAGAGGGACTCCCCGAGTCATCAAGATTATTGCACGACGGACTTTACAGGGCACTGGACATA TATTTCAAGGTTTGATTTTCCTGAGCTACATTTTTACTCAATGGTTTATTGCGATCACGGATGGTTACTTTGATGACTAA TTATGTTGTGATATTGTTCAGGCCCATCCTTGGCTCTCTGATAAAGAGAAGGAAGAACTATGCAACATCATTGACTACAG AAAACTCTCAATCCATGCTTGTGCCCATGCGTCGCAAAACGACAGGTTGCCCCTCAGGGTTGTTCTTCAGGTGCTGTTCT TTGAACAGCTGAATTTGAGAACAGCATTAACTGGATGTCTCAATGCATTGGATGGTGAAATTGCTCCAGCAGCTCCTGTT CGTGCAACTGCCTTAGGTGACACGGCAGGCGAAATTGTACAGAGGGACGGATGGGTGACCGTTTCGCGCGAAAACCAGGT TTTAAAGGTGGACATGGATCGGATGAGCTCTAGAGTTGGAGAACTTGAAGAAGAATTCAGCAAAATAAAGCTAGAAATGA AAACTGTGGCCAAATCCCACAGTTCTCAGGGTTCTCCTCGATTTTTTGGGAGGAAATTTGGGTGTAAGCTTGTTCCTAGA TCTTCAGATGCTCAACCAGAATCCCTTGACCGCTCCGTGTCCACACCAAGAGCATCAGTTGAACAAGCACGTCGATCCCA TAATTCGAAACACAGGGGAAGTTTTTCTTGAGTATCAAGAAACAAGAGCTACTCTTCATTTTATTTATCCATAGTTTCAT ACATAGCAGCAGTGTTGTGTGGTTTAGATTTTTTGTACCGAGGGAAAGGGAAGGAAAATGTTTCTTAACCCATTATGCCT TTTTTTATTTCACTAGTTTGTGCATATCTGAACGTTTTCCATTTCTTTCCCTCGTGTAAAGATGGTTGTATTGTGTAGGA AATTTCACATGTTGTCCTGTTTGTCTGGGGAGTAATTCATGTAATTGTCCATATAGATATATTCTTCATTCTGACTTTTG AGATGTTGACAGTGGAAGATGTTATGTGAAGTTCACCATTGTCATTGTCATCTGAGAAAATCATATAGGTGCAAAGCGGG TACACACAGGTTGGAGCTCAGATATGCACCTAACTGACCATGAAGTGCATGTTTGGATGCACGTGAACGGTGAAACTAAA ACCACATATAGACATAAGGACTTCCCTTAGCTTTTGCGACTGTTCATCATGATTTTGGTTCATCATGATTTTCCACCGTG TATTTGAAGATGCACGAAGTCACTACTTGTGATACTAGCATAGTTTCTTTTATAGATGGTAGTGTATAGTTGTGACATTT GTGTAATTTCATTATCTAGGACAAAAACACATGTGGTATGATACTAGTTGACATTTTTTCGGAGTATACAGTGAGGTCCA TTTCATACTGAAAGAGTCATGATTCTTGCAGGCTACATCTTTATTATAGCACAGCAAACACCAAAAGAAACAAATCTGAA CTCCCATGCTTGTTGACATTTGTGTGGTCTTTTCTCCTTTGTCACTGTTAGAGCCGGCAATTTGGAGTTATGATGTTGGC TAGTTCTTGTATTTTTTAAACTAAGTTGAAAATATTTTTCTGATAAT
CDS sequence (LotjaGi3g1v0172000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCCAGCTGGGAAGCTTTCTGGGTTTCATCGAGAAGGCGATGATTGGTTCTGTGATACTGGATTGCCAAGTGATAT TGCTGTTTCCATTGAGGGTGTCACTTTCCATCTTCATAAGTTCCCTCTTGTATCAAAATGTGGAAAAATTGCTCGGGCAC ATGAAAAGTCCAAGAATACCCATGAGGAGACACTCGCAATGGTGCTGGAAGAATTTCCTGGTGGTTCGGACACTTTCTTA TTTGTGGCCAAATTCTGTTATGGGTTTCGTGTGGAACTGACTGCGAAAAATGCAGTTCTGGTCCATTGCGCTGCAGAGTA CCTGGAAATGACAGATGAATTTGGAGAAGATAACTTGTTGTCGAAATCAGAGAGCTTTTTCCATAAAAATATACTGCGCA ACTGGAAAGATTGCATTTTGGCTCTCCAAAGTTCCGAGCCTGTTCTACCAAGAGCTGAAAGTCTTCATTTAGTGGGCAAG TGTTTAAATGCTCTATCTATGATGGCTTGTACTGACCCAAGTTTGTTTGGATGGCCCATGATGATGTACGGGAGTTTTCA GAGCCCTGGTGGAAGCATTCTTTGGAATGGTATAAACACCGGTGCTAGAATTCGGAGCGCAGAATCTGATTGGTGGTTCG AAGACATCTCATATCTCAGTGTGAGTTTGTTTGAGAGGCTTATTAAGACGATGCAAGCGAGAGGTATAAGACCTGAAAAC CTGGCAGGTGCCATCATGTACTATTCTAGAAAGCACTTGCCCGGTCTGAGTCGGTGGCAGGGTGGCCAAGGCGGCAAAAC CCGGACAGTTGTGAGTTTCAGCTTGACGCCTGCTACTACTGTTGATCAGAGGGTTCTGTTGGAAAGCATTGAAAAGCTTC TTCCTGAAAAGAAGGGAAGATCCTTTTGTTGCTTCCTACTTGGACTTCTAAGAGTGGCTTTGATATTGAATGTCAGTCAA ACTTGCAAGGATTCTTTAGAGAGGAGGATAGGGATGCAATTGGAACTGGCAACTTTAGATAGTCTTCTGATTCCTACGTA TTCAGATTCTGATGCATTATATAACACAGACTGTATTGAACATATAGTCCAGCATTTTATACGTGCAGAATCAAATTTAA CTGCCTTTTCTCCTTCATCACTTGACCAGCATGCGTCGTCTCCTTCATCTGAATCATCCAAAAAAGTGGCAAAGTTGATA GATAGCTACATTGCAGAAATTGCTTCTGATGTTAATTTAAAACCAGGAAAGATACGCGCTCTTGCAGAGGGACTCCCCGA GTCATCAAGATTATTGCACGACGGACTTTACAGGGCACTGGACATATATTTCAAGGCCCATCCTTGGCTCTCTGATAAAG AGAAGGAAGAACTATGCAACATCATTGACTACAGAAAACTCTCAATCCATGCTTGTGCCCATGCGTCGCAAAACGACAGG TTGCCCCTCAGGGTTGTTCTTCAGGTGCTGTTCTTTGAACAGCTGAATTTGAGAACAGCATTAACTGGATGTCTCAATGC ATTGGATGGTGAAATTGCTCCAGCAGCTCCTGTTCGTGCAACTGCCTTAGGTGACACGGCAGGCGAAATTGTACAGAGGG ACGGATGGGTGACCGTTTCGCGCGAAAACCAGGTTTTAAAGGTGGACATGGATCGGATGAGCTCTAGAGTTGGAGAACTT GAAGAAGAATTCAGCAAAATAAAGCTAGAAATGAAAACTGTGGCCAAATCCCACAGTTCTCAGGGTTCTCCTCGATTTTT TGGGAGGAAATTTGGGTGTAAGCTTGTTCCTAGATCTTCAGATGCTCAACCAGAATCCCTTGACCGCTCCGTGTCCACAC CAAGAGCATCAGTTGAACAAGCACGTCGATCCCATAATTCGAAACACAGGGGAAGTTTTTCTTGA
Protein sequence (LotjaGi3g1v0172000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPAGKLSGFHREGDDWFCDTGLPSDIAVSIEGVTFHLHKFPLVSKCGKIARAHEKSKNTHEETLAMVLEEFPGGSDTFL FVAKFCYGFRVELTAKNAVLVHCAAEYLEMTDEFGEDNLLSKSESFFHKNILRNWKDCILALQSSEPVLPRAESLHLVGK CLNALSMMACTDPSLFGWPMMMYGSFQSPGGSILWNGINTGARIRSAESDWWFEDISYLSVSLFERLIKTMQARGIRPEN LAGAIMYYSRKHLPGLSRWQGGQGGKTRTVVSFSLTPATTVDQRVLLESIEKLLPEKKGRSFCCFLLGLLRVALILNVSQ TCKDSLERRIGMQLELATLDSLLIPTYSDSDALYNTDCIEHIVQHFIRAESNLTAFSPSSLDQHASSPSSESSKKVAKLI DSYIAEIASDVNLKPGKIRALAEGLPESSRLLHDGLYRALDIYFKAHPWLSDKEKEELCNIIDYRKLSIHACAHASQNDR LPLRVVLQVLFFEQLNLRTALTGCLNALDGEIAPAAPVRATALGDTAGEIVQRDGWVTVSRENQVLKVDMDRMSSRVGEL EEEFSKIKLEMKTVAKSHSSQGSPRFFGRKFGCKLVPRSSDAQPESLDRSVSTPRASVEQARRSHNSKHRGSFS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 632 | 632 | 0.0 | ||
| PANTHER | 1 | 632 | 632 | 0.0 | – | |
| Phobius | 1 | 301 | 301 | - | – | |
| SUPERFAMILY | 14 | 112 | 99 | 2.59E-11 | ||
| CDD | 17 | 122 | 106 | 9.54804E-37 | – | |
| Gene3D | 17 | 167 | 151 | 1.2E-5 | – | |
| Pfam | 210 | 472 | 263 | 1.2E-86 | ||
| ProSiteProfiles | 210 | 496 | 287 | 88.27 | ||
| Phobius | 302 | 319 | 18 | - | – | |
| Phobius | 320 | 634 | 315 | - | – | |
| Coils | 543 | 570 | 28 | - | – | |
| MobiDBLite | 597 | 634 | 38 | - | – | |
| MobiDBLite | 603 | 620 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0172000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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