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LotjaGi3g1v0191600.1

Overview

Field Value
Gene ID LotjaGi3g1v0191600
Transcript ID LotjaGi3g1v0191600.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description SPX and EXS domain-containing protein 1; TAIR: AT5G35730.1 EXS (ERD1/XPR1/SYG1) family protein; Swiss-Prot: sp|Q55B06|SPXS1_DICDI SPX and EXS domain-containing protein 1; TrEMBL-Plants: tr|I3T4H0|I3T4H0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0191600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:27730243..27738741) extracted from Lotus japonicus Gifu genome v1.2.

ATAATTATGAAGGGACAATATTGAAATGAAATCAAAGAGTTGAATGAAATCTCTATTTAATAGTAGTATTTATTTATGAA ATCAGTGTAGAATTCAACAATTTTGATGATTTCGAATAGGCACCAAATTTAAAAAATTGCAAGACCGGTCCTCTATTCAG ACAGATTCAGAAATTAACGCGTTTGATATGTGCTAGTGCTAGGCTAGCTAGGTTACTGCTCTTTCCTCAATCAATCTCAA TCTTCATTCTTCAGTCTTAAGCCACCACCCTCCTCCGCCACCCATGGCCGCCTGAGATCCACCACCACTACGCTAATCTC GCCGATCAACGCCTCCTTCCGATCAGGTCAGTCCTCTTCTCCCACCATTCTCCGATCCACATTTTGCTTTCATTTCAATT CCCAATGTAGCTAGCTCATGCATCGAATCGAACGATCCCATAGCGCAATCCTCTATTCACTGATTACACTCTTCGATGTT GATTTATGAAATCAGTTTGCATTTAGTTAATTAATTGAGATTAATTGATTGATTCGTTGAGTAATTCTTCAAATTCTGCG TGTTAACAGGTTAATTGAAAGGGGGTTCGAGTTAAAGAGGCATAGTTGTTTGTTTATTCATCTATGTTCGGAGGTGCTGC GGTTCCTGCTAATAGTCCGCATTTACGCAAATCTGGGAGCAGAACTGTTGTCTATGATCATGGTTGGTAATGGTATCTTG ATCATTTGCATTTCAAAGTTCCATAACTGAATCTGTTGTTTATGTTGGTTTTTTCGCGGGATATTTGCTATGTTCTTAGA TGAATATGAGGTGGAAAATGGCGTCGAGGAAGGTCTGTTGTATCCCTTAGAGGCTAATGATTCAAGGGGTGGCACGACAC CAATGAGTGCTTCTGCAATAATGCCGTCGCCTGTTTTGTTGTGGAGATTGAAGGTAAACCTTTTAGAGAGCATTGCTTTC TTGTCAGATTTGTTGTTTGATGCTGTCATTTGAGTGGACGCGCAACTTGTCAGATGGAATGGAATGTTTATTTCATTTAT ATTTGATTCTTTTGGAGAGAAAAATATGTGGTCGGTTACATAATTTATTTCAGAACAGCAAATCGCTGGCACAGTTTTTT TTAGTTGCATAAATTATTATAGTTTTAAGATGATCTCATTATCAATAGTCTCCCTCATAATTTAGTTTTTGATCGAACTC AGTGGCGCAGTGTGATCCAGATAGTCGACCTCACTTAGTGGGATAAGGCTTTTGTTGTTGTTGTTGCATAAATTATTGTA ATTATGAGCTGCAATATGACTATTGTGTGCTTCTTACTGATTCTCATCCTTCCTTATTTCCTTTTCTTTCTCCTTCTATC TCTTTTTTTCAAGAATCTAATTGAGATGGGATTTCCAGGTACTATTTTTCCTTATTTGGGGCTTCATATGTTGCAAGGTC AGTTATAGTTTCTCTCTACAATATTTATTCTCACCAAACCCTGTGGGGTTTTAGGTTAAGGTAGTGTCCCCTTGACTAAA GCATTTCTTTATACTTCCACAATCTTATTTGCCATCTTTGAAAATTGCAGATTGGATGGGATTCTGTCATGAGAATGAGT GCAGACAAACGGGAATTATTTCTATATGAAGCATTTTTGTATTTTAATCCTCTTCTTCTTTCGGTTAGTTCTCCCCCGTC TTACAGTGTTTTTGTGGTCAGTTGTATGCACACATGGAAACATCTCTTTGGATTTGTGTTCAAGGAGGTTAAATTAGTAC TTTCAATTTTTCTTTACATTCTGAGTTGTATCATTTTGTTTCATCTCATTTTCTATTTCAGGCTTTGATGGTTTGGCTTT GGGGAATCAACTTATGGGTTTTTGCCCAGGGAGGAGTCAATTATGCAAAAATATTTGATCTTGATCTAAATCATCTGTCT CACCGGGAAATATGGAAGGTGTCAACTCACCTCTTTGAATCATGTCATGTTTGGCATCTAAAATCAGATTTTGCATTACT GTACGGGAAATAAAAATGGGAGTGGCATTACTTGGAAATTGGAATAGGCCAACCATTTCTGTTCCAATATTTGGTTTGCT TCAGAATGGACTTGTAATTTCATTTTTGTTCTTTCTGTTTTTATGCTTGGTTAGTACATAAAAGAAGATCGAACTAGTAA AGATAAATAAGGAAACAAACATGAATTCCAGTATTAAAGGAATGAGCGTTCCCACATCTCTAGGAGGAAAGGGGTTCCTT ATGGATCAAGGTGTAGAATATAATCATTATTCCGTGTTTTTTTAAACTGAACTAAGGAATACTATTTCCTCTAGAATATA TGTAGGAATAGGATTATTAATGAGTGCTAATGTTGTCTAAGTATTCCTGTTTTCATTATGATATAGTCTTTACTTTAGTT TTGTCTTCAATTACTGTTATTATAGTGCTAAACTGACAAATGGCTTTCTTCTGAACCTTTTATCTAATACTTTATTTTTC TCCTTTTGCACTTTGTAGGCCTTTCTAATAATTTGTCTCGAGTGATTGATTGAATTCTTTTTTTCTGTTGAATCTTTCAG TGTGCCACATGGATGACAATTATTGTTCCAACCAGTATGACAGCATATATTTATCTTTATTCTCGTGGAGAAGTCTCATA TGCTGCATCACAACCAGTGTAATAGATGCATCCACTCTTATTATTTATCATTGAAGCTTTGTTTCCGTGCTTATTCAATT TGGTATTGTAGTATGAAAATTTCTTAACTATATTTAATTTGATTGAAATTTCTTTTCTAATATCTTTGATTATACAATAA CATTAAGTTTATGATGAACTAATCTAAGAGGCCAAGCTTATTGGCTATTTGGCTTCAAAGTATCTCTAGCAGTGGGGATG TGGTTGCGAAGATTCTTTCTAGTTGGAGCATTTATTGGAAACCTAATGTCATTAGACTGGGCTCAGGACCATAGTTAAGT GAAGAAAAGAGAATCAAATTATCATGTAGCCTAGATTATGCTGTCCCAAAAAATTACATACTTCAACTGGGATCATGTTA TTGTTGATTCTATTGCACATCTTTCTTTTTCTCACAGTGGGGTCAGGAAGGCAGACCATTTTTGCAGTTTTGTCTTCTTG CATCACATTAAGTATTTCAACTTATGTTCTCTAAAAAAAAAAGTATTTCGACTTAAATATCTTCCCAATGTTTACTTAAC AAATTTATTAATTTGAATTCATCATTGGTATATAGGTAAGGCTTGCTTGTCGGAATGACCAAAACTGTGTGGTGTCAAAA TTTAAATTAGACATTTACCATGCAGCAAGTTATATTTATTTGTCACCTATGAAAATTGTAGTCAGTATAACTTTCAGGTT AATCTTCACGCAGAAAATAACTTGTAAATGCATATTATTTTTGTTCATTGCTTGTATATGGTTAATGAATATTTGATTTC ATTGTGCTTCCTTTATCTTATTGGAAGTTTGGTTAATTTTCCCCGTATTCTTCTGCAGGTGCTCTTGTATGCTGCTATTG TAGTAGTTTTGATATTCCCTTTCGATATCTTTTATTTTTCATCTAGATATTACTTCTTAAGGACACTCTGGCGAATTCTT TTCCCATTACAGGTAAGCTTGCTCTCATTTGCATGTCTTGTATTAGTAAGTTCTGGCAGTAGTACTCTTCAAGTAGTTGA TGCTGTTTATTAATGTGTGACATATATTTATGCATGCATAAGCAGGCAGATATTTAAGCATGAATGCATGAATTCATATG AAACATGCTTCTTCTTTGTGTTCATTGTTCATAAATATAACTGAAGCATCCATCCAACTTCCTCTCCCCTGTTTGGAAGT CATTAAAAAAGTATGCAGCCAGTGTTAGTGCATTAGGTGAGATGATTGCAATGCAGATGCTTTTGTACACACTGTTCTGA GTGTAGTGAAGTGAGGATAAAAACTGGCAAGACTATGTATAATACATAATGAATTTGTAAAAATTAATGACCTTATCGGA ACTTTTTTCATGATAGATGCAATCAATCAATATCATTGTTAGTGTTTACATTGTTACATGCATCAGTAAAACCCTTGAAG AGGCAATAAGTTGAACCTTTCTATGATCTTTTTTGAAGATACTTGGGAAATATTGCAGTTTTATACCTAGAAGAGAATTA TTCTTTTTTATTTATTCCAATTTCCAATCCTTGATATCTGAGCCTAATTCTTACTCTTGCTGTACCTGATTCCTTAACAA TTGGTGCTTTTAGTATCTTCTAGGAACTAGGGTTGAATATGGCCTAATATTTTTCTATTTTAATGAAAACAGGCAATATC ATTCTCTGATTTTTTCTTGGCTGATATTTTGACTTCCATGGTAAAGGTATGCTTTCTATTCAATATGACCTTTGTATAGA AAAATCTGTCCACTGTTGAGATCCCATATTGATTGGATATATGGCTAAGGTGGAGTTATAAAGGCTTAGACAATCCTCAC CTATGAGCTAGCTTTTGGGGGTAGAGTTATACTTTAATTCTAATATGGTATAAGGGCTTATCCTAAATTCAACATTAGGC CACCCACCACTTTCCAAAAATCAACTTGGCCCCATATATTTCCCAATGAAATCTACCTGACCCTGTAGTGATGGCCCCAC AGCTTTCCCTGTGCAATAAAAAAATAGTCTTATAACCTCCATGCTCCAAATGTCTAGTCCTAGGCGTGAGCAGGTCTGTT GAGATCCACATCAATTAGAGATATGGCCAAAGTAGAGCTTATTATAAAGGCTTGGGAAATTCTCACCTCCTGAGTACTTT TGCCTGGATTTATTACAGATCCAGAGGTCCAACACTGACTCACACATGACATAATATGAGAGTTTAGAATTGACGTAATT CGTTGGTCTAAGTTTTACTCCTAAGTTTCTATTAAAGCATTACAATTTTCATTTTGACTATTATTGCAATTTTATGCAGG TCTTTTCTGATTTGGAGCGTTCAGTATGTAGAATGGTCCACCGACAGGTTTGGTTCTGAAATTTTGAAATTGGTGCTCAT GTTATGATTATCAGTTAAAATACCCTCAACGAAACATCGATTAATAGGGTAGTATATATATATATATATATATATATATA TATTCGTCTTTTGTAAAACTTCTGAGTTTCCTGTTCTTATTATGACAGAATTTGGTCAAATTCAAGTATATGATAAATTC CTTTTGTTTAGCATTGGGATATTGGAGAAAGTTTCCTTGATTTCATTCAAAATTTAGTTCTCTAGAGCTAAATATTGTGT TTTGTAATTTGGCTATATTTTTTATTGCGCTTACCATTACTCATTGCTGTAGAGCTTATGTATTAAAATTAGACTTTTTG GACCTATATATTTAGTATTTTCCTTACAGCTGATGCTTCAGTTTTCTCACTAGGGGTTCCAATTTTTAAAACTTCTTTGC AGGTTGCCACAATTGCTTGGTTGGAAGCTGATTCTGTTTGCGGCAGTCACTCTGTTGCAATCCCTTTGGTTCTTGTTTTG CCCTACCTTTTCCGCCTTAATCAATGTCTCCGACAGTATAAAGATACTGGCGAGAAAAGTTGTCTTCTGAATGGTAAGAG CTTTTTGTTGCTCTAATCAATGCCATTTTTCTGTAACCGTTTTAGAACTTGTAATTGTCATCATCTAAATTTCATGTGCT TATGAAATTGTTGAAAGTTACAACAATAGTTGAAACCATTTCCCTACTAAATTGATGTCATCCATTAACTTAGATTTTTT TTATCTAGGTATTTATTACAAAATAATGTGTGTCGAATTAGAATCATACACAATTTAAGGCATTGTTTGAATCTATTTTG CATGCTTTCCAGCCTTTGCTTCCAAGTGTTTAGGACTCCATTTCTTTTCGTGTCTATTATGTTGCAACTCATGCTATGGA GCTGTGCATTTTAGCATGTGACAAATTGTAAATCATGGGGGAGAGAAAAAGTGAAAGATATCTTAACTAGTTACTACTGA ATTTTCTTGCAAAAATTATGATTCCCTTTTCGTACCATTAAGCATTATCCATTGTGATGACACTATGGAAGCTTTCCTGA GAGAATCTTTGGCTTTTTGAAAATTCTCTCAATATATTGTTTTAATAATTTCTAACAAGTCCCATGACCAAGGATTCAAG CCCTTATAGTAGGAAATTTTACTATTCATTTCCAGAAAAACATCAAATGAAATAAGAAGTAAACAGATAAAATCATGTTA AGGGCTAACTGCTCTCAGTGTTTTGCATCTTTCTTCAGCTGATTGGAAAAGGAACATTTTAACTTCTCATCATTGCATAT TATATTGTATAATTTAAACTTATAAATTTTATGATGTTGATTATTTGAATTGCCATTTTGTTAAGAACTGTGATGTTTGT TTTTTAACTGCTGGTCTTATATTTTCTTTTCATTGCAGATTAAATTGAATTATTTATCATGTTTGTAAACAAATGATTAT ACTGCTTTATAATGATATTCATTGCTTTTGGTTATGGTTTCAGCTTTAAAATATTCAACAGCAGTGCCAGTGATTTTTCT TTCTGCCCTTAAATATCACGTCTTCCCTGATAAGTGGACAAACTTCTATAGGCCTCTCTGGCTTCTGTCAAGTGTTGTGA ACTCATCATACTCTTTCTACTGGGATGTGACTCGAGATTGGGACCTTGGGTATGCCAGATATTTTCCCTTCAATCTAGTA AACTAAGCTTCTTTCTAAGTTATAGATATGTTACTGTCAGGAGTGATTTTATATCTTAGCCTAAACACATTTGAAAATGG AAGATACTGCTTCATTCCCAGAATTGGAGCTATTATTAGTTTTTTGGGTCTGATGACTGTCTCGTGATACCCTGATAAAT ATTCCTTTCAACTTTGCAGTGGCTTCACTCGAATATTCAAGTTCAGCAAGCCGCATGTGTTCTCACATATGTTACACGGG AGGAGATGGGTAAGGATAGTTTGGCAGTGTGTGTGGAGTCCAAGTATATATAAAAAATACGTAATAGTAATAAGGTGAAA ACTATAAAGAAAAACTAGCAATTTTAAAAAATTTAAATTGGCCATGATGCAATAGATTGTTTAAATATATAAATATTTAT ATATATGTCTATATGCTTGTATATATAAATATTTTTTAAAGGTTGATTAAATTCGTGGTGCAATAGTTTAATTGATGGTT CAATCAACCACTTATAAATCTACATATGCTTGTAAACTTATTAATGTGCTTCTAACTGGTCTGCTGAAAATGTGAAAACC CACATGGTCAAAGAAGAACAAAAAGAACAGTTGAGTAGTGAAATAAAGGAATATATTGTTTCCTCAGTGCCCTGACGCAG TTTACATATCCACGGTTTGCAGGTTTACTTTTGGGTGATTGGAAGCAATCTGATTTTGCGGTGCACATGGACATACAAGC TATCTGCCCATCTTCGCCATAACTACCTCACAGTGTTCACTATTGCTGCTTTGGAGATTTTCCGCCGCTTCCAGTGGATC TTTTTCCGTGTAGAAAATGAGTGGATCAAGATGAATTCCAAATCACACATTCAGCTCTCTCCCGGTGACGTTTCAAGTGA CGAAGAGAAGTTACTTCATTCCATTAACTAAATGTATAGGCTAGAGACAGTATGATGCTTTGGCACTTGGCAGTATCATA CAAGGTATATTTCAAAAATTTTGACAAAGGGGAGCTCCATTCCATTTTGTCATTCCATTGGCTTCCCCTGATCCCCTCGC ATATAAAAATGTCATTCTTTATTAACAAAAGAGTTGTTTATTCCATTATTACAGTGCTCTTCAGTGCTATCTTCTATTCT GTAACAATTTTATTTTGTATCCTTAGCAAGCCTTCGTGCTCATAACATTGTTTCTGAATCAACCAGTTGTACCTACAGTA TCCCAGTGTTCATGAGGAAAAAAATTCTGATATTAAACGGCAACATGCCTTATATATAGTAGTATTTCTAGTTTCTCTTG ATTGAATTGGCTGCGTGGCAAATCCTTTACCAACTCTCCTAATAGCATGTTTGATTCCATATTTTGTAAGTGTTAGAATT GATTCTTCATTACTATAAATAAATTTTATTGGATGTTAATTTCTGCAGTGGATATACTCAACGATATTTCACAGCTGAAT TTTATAATACTATCCTACAAAAATTACTTCTCATACATGTATTGAAACATAGATCATTTAAGTTTCATCTCACTTTTATC TTAATCTATTTTATCAATAAATGTTGATCTAGACAAGCACTTAACACTAGCCAATACTAGCAAAACGTGATTTTGCCTTC CATTTGGCTGGTCCTGTACCATATAAATTAGCTGAAAGTAATGCTATTCTGCTTTCTGGTCTGCGAAGTAATGTTATTCT CTTTTTTTTTTGGTCAATAATGTTATTCTATAATTGGCATTTATACTCATGAAAGGTCCTTCATTGGGGCCTAGTATTTG CAATGTTCAAAGATGGAAG 

CDS sequence (LotjaGi3g1v0191600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTCGGAGGTGCTGCGGTTCCTGCTAATAGTCCGCATTTACGCAAATCTGGGAGCAGAACTGTTGTCTATGATCATGA TGAATATGAGGTGGAAAATGGCGTCGAGGAAGGTCTGTTGTATCCCTTAGAGGCTAATGATTCAAGGGGTGGCACGACAC CAATGAGTGCTTCTGCAATAATGCCGTCGCCTGTTTTGTTGTGGAGATTGAAGGTACTATTTTTCCTTATTTGGGGCTTC ATATGTTGCAAGATTGGATGGGATTCTGTCATGAGAATGAGTGCAGACAAACGGGAATTATTTCTATATGAAGCATTTTT GTATTTTAATCCTCTTCTTCTTTCGGCTTTGATGGTTTGGCTTTGGGGAATCAACTTATGGGTTTTTGCCCAGGGAGGAG TCAATTATGCAAAAATATTTGATCTTGATCTAAATCATCTGTCTCACCGGGAAATATGGAAGTGTGCCACATGGATGACA ATTATTGTTCCAACCAGTATGACAGCATATATTTATCTTTATTCTCGTGGAGAAGTCTCATATGCTGCATCACAACCAGT GCTCTTGTATGCTGCTATTGTAGTAGTTTTGATATTCCCTTTCGATATCTTTTATTTTTCATCTAGATATTACTTCTTAA GGACACTCTGGCGAATTCTTTTCCCATTACAGGCAATATCATTCTCTGATTTTTTCTTGGCTGATATTTTGACTTCCATG GTAAAGGTCTTTTCTGATTTGGAGCGTTCAGTATGTAGAATGGTCCACCGACAGGTTGCCACAATTGCTTGGTTGGAAGC TGATTCTGTTTGCGGCAGTCACTCTGTTGCAATCCCTTTGGTTCTTGTTTTGCCCTACCTTTTCCGCCTTAATCAATGTC TCCGACAGTATAAAGATACTGGCGAGAAAAGTTGTCTTCTGAATGCTTTAAAATATTCAACAGCAGTGCCAGTGATTTTT CTTTCTGCCCTTAAATATCACGTCTTCCCTGATAAGTGGACAAACTTCTATAGGCCTCTCTGGCTTCTGTCAAGTGTTGT GAACTCATCATACTCTTTCTACTGGGATGTGACTCGAGATTGGGACCTTGGTGGCTTCACTCGAATATTCAAGTTCAGCA AGCCGCATGTGTTCTCACATATGTTACACGGGAGGAGATGGGTTTACTTTTGGGTGATTGGAAGCAATCTGATTTTGCGG TGCACATGGACATACAAGCTATCTGCCCATCTTCGCCATAACTACCTCACAGTGTTCACTATTGCTGCTTTGGAGATTTT CCGCCGCTTCCAGTGGATCTTTTTCCGTGTAGAAAATGAGTGGATCAAGATGAATTCCAAATCACACATTCAGCTCTCTC CCGGTGACGTTTCAAGTGACGAAGAGAAGTTACTTCATTCCATTAACTAA 

Protein sequence (LotjaGi3g1v0191600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MFGGAAVPANSPHLRKSGSRTVVYDHDEYEVENGVEEGLLYPLEANDSRGGTTPMSASAIMPSPVLLWRLKVLFFLIWGF ICCKIGWDSVMRMSADKRELFLYEAFLYFNPLLLSALMVWLWGINLWVFAQGGVNYAKIFDLDLNHLSHREIWKCATWMT IIVPTSMTAYIYLYSRGEVSYAASQPVLLYAAIVVVLIFPFDIFYFSSRYYFLRTLWRILFPLQAISFSDFFLADILTSM VKVFSDLERSVCRMVHRQVATIAWLEADSVCGSHSVAIPLVLVLPYLFRLNQCLRQYKDTGEKSCLLNALKYSTAVPVIF LSALKYHVFPDKWTNFYRPLWLLSSVVNSSYSFYWDVTRDWDLGGFTRIFKFSKPHVFSHMLHGRRWVYFWVIGSNLILR CTWTYKLSAHLRHNYLTVFTIAALEIFRRFQWIFFRVENEWIKMNSKSHIQLSPGDVSSDEEKLLHSIN 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 65 65 -
PANTHER 10 467 458 2.4E-245
PANTHER 10 467 458 2.4E-245
TMHMM 65 87 23 -
Phobius 66 87 22 -
Phobius 88 106 19 -
TMHMM 100 122 23 -
Pfam 106 442 337 2.8E-102
Phobius 107 130 24 -
Phobius 131 150 20 -
Phobius 151 175 25 -
TMHMM 152 174 23 -
Phobius 176 186 11 -
Phobius 187 207 21 -
TMHMM 187 206 20 -
Phobius 208 218 11 -
Phobius 219 241 23 -
Phobius 242 260 19 -
Phobius 261 288 28 -
ProSiteProfiles 269 469 201 20.854
Phobius 289 308 20 -
Phobius 309 329 21 -
Phobius 330 386 57 -
Phobius 387 403 17 -
Phobius 404 414 11 -
Phobius 415 435 21 -
Phobius 436 469 34 -
MobiDBLite 450 469 20 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0191600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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