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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0202200 |
| Transcript ID | LotjaGi3g1v0202200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Solute carrier family 40 member 1; TAIR: AT2G38460.1 iron regulated 1; Swiss-Prot: sp|O80905|S40A1_ARATH Solute carrier family 40 member 1; TrEMBL-Plants: tr|A0A072USG9|A0A072USG9_MEDTR Solute carrier family 40 protein; Found in the gene: LotjaGi3g1v0202200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:29507399..29514114) extracted from Lotus japonicus Gifu genome v1.2.
AGTTTGTAATGGAAGAAAGTGTCACAATGAGGGATCCACTGCCACAAATCCCATCTTCTCTAATCATCACTTATCTTTAC ATTGGTCACTTCTTAACTAGATGGGGCAACAGGTTGTTCTTTCCTTTCTCACCATTGCTTTAAACTAATAAATCAAAATG TGGATATATCACTATCTGCTCCTTGGTTCGTTTGATTTCACTGTCAAAATTTTTTGAGATCCCCCCCTCCCCCTTTTTGT GTCTTTTGTTTCTTGATCGGACAAATCCAGTCAATCACTCATGGGAGTGTTGATTGAAGAGGAACAATGAAACTCCAGTG AGGAAGAACGGTGAAAAGGTGACTTCCATGGTGCTCCGTTGTTTGCTACGCTCGGGAGGGGACCCTACGGAAACACTCTG ACGCTCAAGTGAGAACATGGGGATAAAAGGGGAAGTGAGATGATGGAGTAGATAGTGTGTACCTTGTGTTCTCTTTAAAC TTTGTCTTTATAGAGGTTGACTCGCGTGGTTTGAGGTAGTCATGAGTGCTTAGTACATTTTTTTAGCTTCGTGCCCTTGT CTTGGTTGCCGGTCCATAGTTACTTGATGTGATGTGGTGAAGTGACATAAACATCCTCGGTTTGGTGATTGACCGTGCGA CAGTGAGGACATCGTCGCCTATACGAGGGTGGTGATGGTCATGATCGGTGACGGGTTTGATTGGTATGAGGCGATCAAGT TATGGATTGGACATCGTCTGACATTTAGTTATGGATGCCGAGAGGTATGAAAGTGATTGAATCTGGCTATCGGAACAGTA GCCATCTAGCTCTGGTGCGCAGTGAGCTGCGCACTGAGAGGTATATGTGTTCAGGGCAATCACGCTCAAAGGACCTGGGA TCACCATCAGAACTATAGTGACCGGGGATCACCGTCAGAACATTTCTAAAACCCTCCTTCTGCCAATAAATTTTTTCTTT TCAGTTTAATTTCTTCACAAAAAGGAATGAATTGAAATGCATGATTGTCTTCCTGTGAGCTCAGAACTTTGTCATCACTG GAATATAAAATATGACCCACCCTGACATAATAATTTAACACATCTATTACCAAGTTGATATATTGACCACAGTAGATATG ATTTACTTGCACAGCAGGTAAGGTGGTTAGGATCAGTGTTTTGGGTTGAGATTTTCAAAATCATTGTTGAACCAGTGAAG GGTAACACTATTTAGTATTTACTGCTTTAATTTGTTTTTTTCTTGTGAAATTAAATGAGGACTCTCTGTTTGCAGAATGT GGGAATTCTCTGTTGGTTTATATATGATCCATATCTGGCCAGACTCATTGCTCTATGCAGCAATATATGGTGCTGTTGAA TCTGCCTCCACCGCAGTGTTTGGTCCTATAATTGGAACATGGGTTGATAAGTTAACGTATGTGAAGGTGATTCCTAGTCT TATTGCTAGCACTTCCATTTTATCAGCTGTAAAACTATGTAACACATTTGCTATTTGTTATTGTCATATTAACAGTTACT TAGGAACAATATACAGAGTTATCTTTGGACTGATTATCTTTTTCTTGTGCACAGTGATGGTTAACTAACTGAAATAAAAA GTTAAAGGTAGATAATGAAACCAGAAATTTCCATTGTGTCTGATACAACAACAAAATTAAAAGATAAGAGACATTTTCTA TTCTACAGGCCTGAAGTTAGGTCTGGAATAGACAGGCTATTGGCAATTTGATTGACAGTGATGAGAAAATGGAGAAACAT ATAAGTGGAAAGACTTAACGGACCTAGATATTAGGTCAGAACATGGTCTTGCTTCATGCCTAACCCATTAGTTGCAAATC TCACTGTTAGCTAAAATCCTAATTGATTCTTGTTACTAGAATTTATTTGCTAGGATTCTATCATAATGTGCTGCTAGAAG TGCCAAAATCTTTCCATTTACTATTTAAAGAATTAGACATCTACAAAATTTAAAGATAACAAAATGTAGTCTGACAGAAG TGTCTTTAGTTGTTTCAATTTCCTTCATAATTATTTGATTACAAAGTTGCCAATTATGAAGCAATCCTATCTTCATGTTT AACTGGCAGGTTTTGAAACTGTGGTTGGTGATACAGAATCTCTCTTTCATTATTGCCGGGGCCACTGTGTTTACCTTACT TGTCTACTCATCTTTGAAGTTTACTTGTTTCTCAGCTTTCATATTGCTGGTTTCTATAACCAATGTCTGTGGTGGCATTG GGGTGCTTTCAAATCTTGCCGGTACCATCTTGATTGAAAGAGAATGGTAATATTCTTGAGGCTTTAGTGAAAAAAGATTT ATATTTGATTAAGCAAGTATAGTGAATATTCTATTGCTTGTATGAAATAGATACCAAAGATTTAGTTTTCACTTTTCACC ATCATGTCGTCTCTACAATCTCTCAAGGTTTATAAGTCAGGTAAATACTAGCTGTGTCTATCTATAAGTTTTGCTTTGTT TCTAGTAGTTCAATTATGGACGATGAGGGGAAAATAGCATTTCACAGTAAGCTTAATGCTTTTACTGCCTCTCTTCAAAA TGTAATGACCCTGGTGATGTTTTATAGCATCACTTGTTGAAGAAAGCTGAATTAAGTGAAATGTCTAGATGAATGATAGC ATGAAAAAAATGTATTTATATAGTTTATTTGTACAGGTTGTTAGTTATATCCGAAGGTCAACCCCCGGAATTGCTGACAA AGATGAATTCAGTTACCAGACGCATTGATCTGAGCTGCAAACTTCTTGCTCCTGTTATAACTGGGTTTATAATAAGCTTT GTATCCCTAGAAGCATCTGCTATAACTCTAGCACTCTGGAATACTGTCTCTGTTTGGGTAGAGTATTGGCTTTTTATCTC GGTGTATAAGGGGATTCCAGCTTTGGGCCAAAGTAGCCTGAGGAGGATGACAAGATTTCCACGAAGGGATCTAGAAATGA AGAATTCAACTTCAGAGGGAGATAGCTTGCTTTCTGTTACTGATAGTAACACTGAATTGGCAGATAGAGAAAGCTGGAAC AAAATTTCTGAGTGGATTTCAAGGATCCCTTATATTGATGCATGGAGAGTTTATTTACAGCAACAAGTTGTGCTACCTGG ACTAGCTCTGGCTTTGCTATATTTCACTGTACTCAGGTGAAATATTACAAACATCCATAGAATTTCACTAGTTACACAGG CACTAGTGTGAACAAAAGGGGCCAAAAATGATGTCAGACATGTCATATTTATAAAGGAGTTTCTTTGATATTTTCAGTTT TACCTCTTTAGAAGCTGTATCAGTATTATTCTATGTGATATGTCAAGGAATTGCACTAGTTACACGGGCACACTAGGACC AGCATATCCTTTTCTTTAAGAATAACTATTCTTAGCAAGCTGGTCATTTGTTACAATTGTGCATCCATTTTTTTGTGAAA TTCGCTCTTAGTTTATAAACAAATTGGAAATCCAAGTTAGCAAGGTCTATTGATTATACTGTATTGGACAAGGTCATTCA GAAAATTTGGTTTCAAACACCCCTTTACTCCTTTAGAAAAATGTATTTGCTTTCAGTCGGGGATGAAGCCTCACCATTGA AATTCCAATTGCTTGCTTCAGCTTTGGAACTCTAATGACAGCCACATTAGAATGGAAAGGCATATCTGCATATGTTATTG GAATGGCACGAGGAATAAGTGCTGTAGTTGGAATCGCTGCAACAGTTCTATATCCTTTGCTGCAGTCTCGCATACCGACA ATTAGAACTGGACTTTGGTCGATCGGGTCTCAGGTATAAACCAAAAAATGGCTTAATGACTGCTAGTCAAATTTTAATCT CCTTTCTTTGTGACCTGTTACAGATAATACTTAATCATGTCGGTTGTTCTCCTATGAATCTTTGTCTTGTTCATGTATGT TTTGCATGCAGTGGGCTTGCCTTCTCCCCTGTGTAGCTGCAATAGGGATAAAAAATGGCCTTCTATCATCTTATATTTTG ATGGGAAGTGTATCTATATCTCGGCTTGGACTGTGGATGTTTGACTTGTCTGTACTTCAACAAATGCAGGCAAGAAATAG CCCTTGTTGTCTGAAATCATTTCAGTTGTTTCCTAAAGATTTTTTTTAACTAATGTGAAATTTAGATTTAAATGTCTGAT CAATCATAAAAGTTCTCTTTCTTCATAATCATCTTGGTCTGATCTTTTTCAATTTTTTGAAACAGAACCTTGTGCCAGAA TCTGATCGTTTGATTGTTGGAGGTGTTCAGAATTCTCTGCAGTCCTTGATGGATTTATTGGCCTATGTTATGGGAATCAT AATATCTGATCCACGGGTGAGTTTTAAAACTATACTTTTATCTGATGCTTTAATGGACTTCACTACTGATAAGACTTCCT TTTCAACTTTTGAAAGAGAATTCTCTAATTTCACCACCACTAAGTTTGATCTAACAAAGGCGTCTCTAACCACAGAGAAA CAGAGTTTTTACATTTCCTTAGTGACCCTATTAAAAAGTTCTAACCTCAGTGAATTATTGCTTATTCATTGATAGGTGTT CCATAAATACATGTATGCTTAGGTACGGCAAAAGGATAAAACGACCTATATCTCCCTCTTCATTGGCCTTAGTGCTTGAG GTTAAAAATTCATACCATGTTGCATTTAGTAGCCCATTTCCATTAGTTTCTCTACACCACTAACTCTGGCCTAAGATTTA TTTCTTTATAGTTTCTGTATTACTGATTAAAAGATTATGAACTACTTTAAAAAACTGGTTATTGCTATGCATCTAATGCT TAACAAAATCAGTATATAATTGTGTTGATCCTGTTTTGTGGTCTGTTCAGGACTTTTGGAAGTTGATTCTGTTATCGTTT CTGGCAGTCACATTAGCTGCATTCCTTTACTGCATTCATGTATACCGCGCGGGGAGGCTTATCTTTCACTTTGACAGACT TCTTAAGGGTAAGTTGTTTGTAAGAGCATCTGAAGATGTGAATGTTAGAATTTTACGAATTTTCCTTTATTTAGACATAA GTTGTGTACGCATTTTCATGTTATTAAAATATGAGTTGAATGTACGACATGATATATTTTTCTCTTTGAGCCTATTTTTC TAATGTGGCCTATTTTGGGTTTTGGAAATCATGATGTAATATAGGGAGTTAGATTTTTGCACCTCCCTAAGCTCCTATTT ACACACCCCATTTAAAAAAAAAATTAATTACAAAAATCTCTTTTAGTTAAAAATACACACACACACACACCCTTTAGCAA ACCCTAAACCATTCTTTTTCTGGTTCTCACTCCATGTCTTCTATCTTTTCGGTGATCTTGGCACTCTATCCACCATAGGT GAGATTTCTATTGAGAATTTAACATATGTGAAATTGAAGCTTTGGGAGTAAAATTTTACAATTTTTGTTACACTTTAGGA AGTTGAAGTTTTGGGAGCAAAATTTTAAATTTCCAGCACTTGAAGTTCCAGAAGTGTATTTATGTCAATATAAGTTCAGA ATAGAAATTTTTTAAGATTTTGGAAGTGTAATTTTCATTTCCGAAATCTTGAATTCCATAAGTAAATCCACTTTCACTTC TGGAAGTGAATTTATCTCTTGAAGCTAAAAGACTTTTCTACTATGGAACTTCAAGTTTTTAAGATTGAAAATTCAGCTTC CAGAACTGGAACTTGTAATTTTCTCTTATGGAAGCTGGAGCTCCTAATGGAAAAAACTTACTCTTTCAAGTTTCAGAAGC TAAGAAATTTCAATTTTGGAACTCGATATTCTGAATTGCATTTAACTTGGTATAATTAACTCAAGTTTCAAAATTGAATT TTTTTCTTCCGGAACTTGAACTTTTTAAAGAAGAAAACTTTAATATGATGTGTTTTTTACTACACAATATACTGTGATCT GTTTTTGTCTTTTCTTTTTGAGTTATTTCATCATCCCCAGGAGCAAATGTGGAAGAATATTCAAGTTCAAATTACAATCC ATCGGAAGAAGAGGACATACCAAGAAATACTTGTAACAATGACGAGGTAATAGTAACACTTCATATATGCATTAACACTC TTTATCATTCAACTGAGGTATAGCTAAGGGTTTCTACAATCATGTTACTTTTCTATATTTATTTATTTTCCCCTTTAAAC ACGTGATCATTCTTTTTCATGGATTTCAATTTTGTTCTTAGGTTAATGTCAAGGTTCTTCAATTTTTTGTGTTCTTGATG GAACTTTAATTTTTCAATTGCAAAACTCCTTAATTAACAGTCATCAAGTTTATATTGAAATTTCTGTGACATTCCGGACT GACACAGTAACATTATGTTCTGTTCAATTTATAGAATCCAGCTTAATGCAAGTCAAGCTACAAGCCTATCAGCCTATGGG TCTTAAGGTTTGTTGAGGCTTTTCCAAAAACAATGTGTTAAAGCATAATTTTGTAATCTTACATGTTGTGTAGGTTCTGA TTTGCGTGGATAAATCTAGCAGGTTGAAAGGGTGTTTTGGGGATGGTTGCTTACAATGAAAGATAAGCAAGCCACGAGCC CAGTGAGTGTTTTGCTTGTTGGTACATGTCTAATTCTCATTATAAGTAAAATCTCGAATTCGAGCATTGCAAAACTCTTC TAGGAGAGTTAGCCCTACCATAATGTAAATGTTTCCGATTAGAACAAGATTGTCTCCCAAGAAGGATATATATATA
CDS sequence (LotjaGi3g1v0202200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAAAGTGTCACAATGAGGGATCCACTGCCACAAATCCCATCTTCTCTAATCATCACTTATCTTTACATTGGTCA CTTCTTAACTAGATGGGGCAACAGAATGTGGGAATTCTCTGTTGGTTTATATATGATCCATATCTGGCCAGACTCATTGC TCTATGCAGCAATATATGGTGCTGTTGAATCTGCCTCCACCGCAGTGTTTGGTCCTATAATTGGAACATGGGTTGATAAG TTAACGTATGTGAAGGTTTTGAAACTGTGGTTGGTGATACAGAATCTCTCTTTCATTATTGCCGGGGCCACTGTGTTTAC CTTACTTGTCTACTCATCTTTGAAGTTTACTTGTTTCTCAGCTTTCATATTGCTGGTTTCTATAACCAATGTCTGTGGTG GCATTGGGGTGCTTTCAAATCTTGCCGGTACCATCTTGATTGAAAGAGAATGGTTGTTAGTTATATCCGAAGGTCAACCC CCGGAATTGCTGACAAAGATGAATTCAGTTACCAGACGCATTGATCTGAGCTGCAAACTTCTTGCTCCTGTTATAACTGG GTTTATAATAAGCTTTGTATCCCTAGAAGCATCTGCTATAACTCTAGCACTCTGGAATACTGTCTCTGTTTGGGTAGAGT ATTGGCTTTTTATCTCGGTGTATAAGGGGATTCCAGCTTTGGGCCAAAGTAGCCTGAGGAGGATGACAAGATTTCCACGA AGGGATCTAGAAATGAAGAATTCAACTTCAGAGGGAGATAGCTTGCTTTCTGTTACTGATAGTAACACTGAATTGGCAGA TAGAGAAAGCTGGAACAAAATTTCTGAGTGGATTTCAAGGATCCCTTATATTGATGCATGGAGAGTTTATTTACAGCAAC AAGTTGTGCTACCTGGACTAGCTCTGGCTTTGCTATATTTCACTGTACTCAGCTTTGGAACTCTAATGACAGCCACATTA GAATGGAAAGGCATATCTGCATATGTTATTGGAATGGCACGAGGAATAAGTGCTGTAGTTGGAATCGCTGCAACAGTTCT ATATCCTTTGCTGCAGTCTCGCATACCGACAATTAGAACTGGACTTTGGTCGATCGGGTCTCAGTGGGCTTGCCTTCTCC CCTGTGTAGCTGCAATAGGGATAAAAAATGGCCTTCTATCATCTTATATTTTGATGGGAAGTGTATCTATATCTCGGCTT GGACTGTGGATGTTTGACTTGTCTGTACTTCAACAAATGCAGAACCTTGTGCCAGAATCTGATCGTTTGATTGTTGGAGG TGTTCAGAATTCTCTGCAGTCCTTGATGGATTTATTGGCCTATGTTATGGGAATCATAATATCTGATCCACGGGACTTTT GGAAGTTGATTCTGTTATCGTTTCTGGCAGTCACATTAGCTGCATTCCTTTACTGCATTCATGTATACCGCGCGGGGAGG CTTATCTTTCACTTTGACAGACTTCTTAAGGGAGCAAATGTGGAAGAATATTCAAGTTCAAATTACAATCCATCGGAAGA AGAGGACATACCAAGAAATACTTGTAACAATGACGAGAATCCAGCTTAA
Protein sequence (LotjaGi3g1v0202200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEESVTMRDPLPQIPSSLIITYLYIGHFLTRWGNRMWEFSVGLYMIHIWPDSLLYAAIYGAVESASTAVFGPIIGTWVDK LTYVKVLKLWLVIQNLSFIIAGATVFTLLVYSSLKFTCFSAFILLVSITNVCGGIGVLSNLAGTILIEREWLLVISEGQP PELLTKMNSVTRRIDLSCKLLAPVITGFIISFVSLEASAITLALWNTVSVWVEYWLFISVYKGIPALGQSSLRRMTRFPR RDLEMKNSTSEGDSLLSVTDSNTELADRESWNKISEWISRIPYIDAWRVYLQQQVVLPGLALALLYFTVLSFGTLMTATL EWKGISAYVIGMARGISAVVGIAATVLYPLLQSRIPTIRTGLWSIGSQWACLLPCVAAIGIKNGLLSSYILMGSVSISRL GLWMFDLSVLQQMQNLVPESDRLIVGGVQNSLQSLMDLLAYVMGIIISDPRDFWKLILLSFLAVTLAAFLYCIHVYRAGR LIFHFDRLLKGANVEEYSSSNYNPSEEEDIPRNTCNNDENPA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 33 | 22 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| SUPERFAMILY | 19 | 477 | 459 | 6.19E-17 | ||
| PANTHER | 20 | 486 | 467 | 1.2E-194 | – | |
| PANTHER | 20 | 486 | 467 | 1.2E-194 | ||
| Pfam | 20 | 464 | 445 | 8.9E-154 | ||
| CDD | 22 | 474 | 453 | 4.89634E-134 | – | |
| Phobius | 34 | 52 | 19 | - | – | |
| Phobius | 53 | 77 | 25 | - | – | |
| TMHMM | 55 | 77 | 23 | - | – | |
| Phobius | 78 | 88 | 11 | - | – | |
| Phobius | 89 | 113 | 25 | - | – | |
| TMHMM | 89 | 111 | 23 | - | – | |
| Phobius | 114 | 118 | 5 | - | – | |
| Phobius | 119 | 142 | 24 | - | – | |
| TMHMM | 121 | 143 | 23 | - | – | |
| Phobius | 143 | 179 | 37 | - | – | |
| TMHMM | 176 | 195 | 20 | - | – | |
| Phobius | 180 | 205 | 26 | - | – | |
| Phobius | 206 | 210 | 5 | - | – | |
| TMHMM | 210 | 232 | 23 | - | – | |
| Phobius | 211 | 232 | 22 | - | – | |
| Phobius | 233 | 294 | 62 | - | – | |
| Phobius | 295 | 319 | 25 | - | – | |
| TMHMM | 296 | 318 | 23 | - | – | |
| Phobius | 320 | 324 | 5 | - | – | |
| Phobius | 325 | 350 | 26 | - | – | |
| TMHMM | 328 | 350 | 23 | - | – | |
| Phobius | 351 | 361 | 11 | - | – | |
| Phobius | 362 | 381 | 20 | - | – | |
| Phobius | 382 | 386 | 5 | - | – | |
| Phobius | 387 | 410 | 24 | - | – | |
| Phobius | 411 | 421 | 11 | - | – | |
| Phobius | 422 | 447 | 26 | - | – | |
| Phobius | 448 | 452 | 5 | - | – | |
| Phobius | 453 | 473 | 21 | - | – | |
| TMHMM | 456 | 478 | 23 | - | – | |
| Phobius | 474 | 522 | 49 | - | – | |
| MobiDBLite | 500 | 522 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion transmembrane transporter activity | Enables the transfer of iron (Fe) ions from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Iron ion transmembrane transport | A process in which an iron ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi3g1v0202200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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