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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0212100 |
| Transcript ID | LotjaGi3g1v0212100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072U1L8|A0A072U1L8_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0212100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:31824178..31831730) extracted from Lotus japonicus Gifu genome v1.2.
CAACTGGCCTGATCCTTGTTGACTAGGAACCTCATACATTATGAACTCAGATTGAATAGAGTGCAGATTTGGCCAAACGA CTACAGAAAAAAGAAAAGAGCACTGAAGCTTTGGACTATGCTTGGGAGTGGATCTTTCTTGCAATTTTTGTCGTTTCTTC TTTTGTTTTATATTTGCACTTAAAGACAAAAGCAAAAAGGTGAGGTGAGTTAAAGTCACTCAAAGTCAATAATAGAGGAA TAAAAAAGTGCGCCTTTACTGGAAAGTGGAGACCCTCTTGTAAAAAGTGCTGCACAATGATCTCTGTGTTCCCATATTTG CTTCCCCTCACCGCACAGCTACTCTCTCCGCGACTTCCGTCTCCGCCACACTCACTGGCAGCCTTAGCCCTCCGATTCCG ACATGGAGAGCATCATCACGGACCAGCAGACCTTCGACGACCCAGTGGAAGCTATCCGACATGCCTACCATCGCCAAGTA TGCTTTTCTTCCCTTATTTTTATGTCAATAGCATAATTTCGTTATATCTATGATCTCTTTGATATTTTATTTTCGAATTT TAGGGAAAGATGTACGATGTGTTTTTGAGTTTTAGAGGAGAAGACAGTCGCGCAAAGTTCATTTCACATCTCTATGCCTC TCTCCAAAATGCTGGCATTTATGTTTTCAGAGACAATGATGAGATTGAACGGGGAGATTGGGTCTCATACTCACTAATGC GAGCTATCAGTCAATCTAAAATTTGTATCGTGGTTTTGTCAAAACATTATATGCTAATTCAAAATGGTGTATGCTAGAGT TGTATGAAATAATGAAACATCGCAGAACCACAGGGCTGGTGGTTGTTCCGGTGTTCTATGAGGTAGATCCCTCAGATGTA CGTCATCAGACAGGTGATTTTGGAAAGGAGTTTGAAAATCTTAGTACAAGAACCTCGATCGAAGAAGAAGATAAACTTAG TGTGAACAAATTTAAATGGTTTTGAAGAATCTCACTCTCACATATGGTGCGTGAAATTCGCCATCCAATAAAGAAAAGGG TTAACTAAGTTTTTTGGTCCCTCTAATATCGTCGGCGGAATTTAGTCCCCTGTCGGAGCAAAGTTGTCTTTTGCCTCTCT TTTGATGCTAATCCTATCATTATGCTGCCACTGCCATTTTTATGTGTTCTACTGGTCTACTCAAATGCCTTTTTATGTTT TTGGGATGTACCTTGTATAGGGGTTTATGTCATGAGTTTGGTGAAGGTGTTGTGTTTTGCTCTTTGTATGTTGTGCCTTG GTTTGTGTTTATTCAACTAAACATATCGTGGATTAGATAGTTTAGGTTGAGAGGGTTATATGGTGTCACACTGCTCTTTG GGTGTTGTTCTTGTTCTTGTAATATTTATAAATGTTGACCACTACAGGATCCACCATGCCCAAACATCCTGCCAAAAAGG TGACCAACTAATCTAAGATTGTTGCCCCTTCCCCACCCATCTTTTACTGGTGGGTGAAGAAAGAGGTTCTCCACTTTTCT TCATCTCACACTTCTCCTAAGTCAACGCCAACCTAAAAACTTGTTCAACCTAAAAACTTGTTCAACCTTTGCGTAGGCAA ACCGGCCGAGGAAGCTATTGACTTCATTTTTATGTACAAGACTATATTTGGCAAATTGCATGTTGAACTTCTCTTTTCTT CCTTCGGATGCTCTATCCTTCATGTCCTTAATGTCACGCCATCCTAGATGCATCCAAATAGTTGGGCGTTTGTGAAAGTC TTTTCCATACTCTGCATTCACTTCCATATTTATCCCACCGCCATCATCTTTTTCTCCTTGGAAGCAGGTCTTGGTTTACA ATTGATGGTCGGGGGGGTTTCCATCAAAACTAGTCAAGGATCAACTGATCAAGTATCTTCACGCTTTATCTCCAATCTTA CGAAAAATTTATTCATGAGTTTTTCCAGCTAAAGGCTAAAGAAGATTTCCTGAAAGTTTTCTAAGTTAAAGGCCAAAGGT AGATTTGGCTAAGAATGCATTGGAGATTGAAGAGATAGTGGGACATGCAGCTGAGAAGTATCAGGCTGGTTTCTAAGTTT TTAACTTATGTTTTCCGGTGTCTGCTGTGCAATTTTGTAACAGCGACAATGTTACCTTCAGGGAAGGCTGATCTGGCCGC TTTTGGATTGTACTGTTTAATCTTTTATCAAACATATGTTTCATTATCTTTTAAGCCACTTAAGTATTGACTATCGTTTA CACGGTAGTTTTATTGACAGAATTTAACGTTTTAAAAACAATGTTCACAAGGATACACGCGGAACTGTCATTTTTTCACA ATTAATTTTCCTCTTCTTTGACACCACCACAGGTTGTAAAATGGAAATATATTTGTTTATCCATACTTGTTCTAGATTCA TATTTTGGTTCATAATTTACAGAAATGAAAGTGAGGATATCATGAAAGTAGTTGAAGATGTTACCGATTTGCTAGGCAAG ACAGACTTATTTGTTGCTGAGCACCCAGTGGGGGTAGAAGCCCGCATTCAAGATGTCATTCAACTATTGAAAAGCCAACG ATCCACAGATCCTCTACTACTTGGGATATGGGGAATGGGAGGGTTGGGTAAAACAACCATTGCCAAAGCCGTGTATAATC AAATTCGTCGTGATTTTGAGGCAAAGAGCTTCCTCCTAAATGTTAGGGAAGTTTGCGAACAAAATAATGGCTTAGTTACT TTACAACAGAAGCTTCTTTCTGATATCTACAAAAAAACCAAGATAAAGATAGATAATGTTGAATCAGGAAGAGAGGAATT GAAGAGAAGACTTAGCCAAAAGAAAATATTTCCTGTGCTCGATGATGTCAATAAGTTGGACCAACTAAGTGCTTTGTGTG GAAGTCGTGACTGGTTTGGCCAAGGAAGTAGAATTATCATCACAACAAGAGATGTAAATATTGTTAAAAAGGAGCTTGGA GTTGAAATTGTATATAGAATAAAAGAAATGAACGACAAGGAATCTCTTGAGCTGTTTAGTTGGCATGCATTTAAACAACC AAGTCCTGAAGATGGTTTTGCCAATCTTTCTAGCGATGTAGTTAAATACTGCGGGGGGTTGCCGCTAGCTCTTCAAGTAA TTGGGTCCTTTTTGTTGACTAGGAGGAGGATAACAGAGTGGAAGAGTGTACTGGAGAAACTCAAAATGATTCCCAATAAT GAAGTGATGGAGAAGCTTAGAATAAGTTTTGATGGTTTAAGTGATGATGATATTAAAGAAATATTCCTTGATATGGCTTT CTTCTTTATTGGGATGGACCAAAATGATGTGGTTGAGATATTAAATGACTGTGGGAATTTTGCAGAAATTGGAATAAGTG TCCTCGTACAACAATGCCTTGTAACTATTGATAGGAAGAACAAGATCGGAATGCATGATTTGCTACGAGACATGGGAAGA GATATTGTCCGCAAGAGATCAGCAGAAGGAGGCAAGGAGCCTAGTAGATTATGGTGTTATGAGGATGTGCAGCGTGTATT ATCAAAATACACTGTAAGAACTTATTTCATCTATTGTTTTTGTTTCTAAACTATCTAAAGTCAGATTGCTAAATGAGTTC AGTTGTTACCAACATTCAGTTGCTTGTCTTGTTTATCTCAATAACTGTGAAAATGATCTTTGCTTGTGAATCATTTTGTG CTACATGGTTCCTAGTAATAGATTATGGGCTTCAAACCTTACTGTTGTAGTCAGTTACTCTAGTAGATTTGTAATTACCA TTTACCTACAATTTGTGATTCATTTTTTTTCTGTTGATTTTGTCTCATAGAGAACAGTGGATGTTCAGGGACTGACTTTG AAGTGTCCAGAAATGGATACAACTTATAATTTGGATGCCAAAGCATTTGGGAAGATGGATAAACTTAGATTGCTTCAACT TGCTGGCGCACAACTTGATGGAGATTATAAGTATCTTTCAAGAGATCTTAGATGGCTTTGCTGGCATAGATTTCCTTTAA AATATACACCAGCAGACTTCCATCAACAAAGTTTAGTTGCCATCGACTTCAAATATTCCAATCTGGTACAAGTTTGGAAG AAGTCTCAGGTTTCTTTTTTATATTCTTTAAAAGATAGAGTTTGAAGATTACATATCTTACATGGACATTTTAAACCGAC TTTTGGGTGATATTTTTTCTTTTTCGTCTATTTTCGCTGCTTTCTCTAACATAGGTTTTCAAATCTCTTTGTGCCAGATG CTGATGAAGCTGAAATTTCTCAATCTTAGTCATTCTCCAAACTTAAGACAAACTCCAGACTTTTCAAACTTACCAAATCT TGAAAAGTTAGTACTGAAAGATTGTACTAGTTTGTCTTCGATTTCTCATACTATTGGAAATCTCAATGAACTGCTTCTTA TAAACTTGAAAAATTGTACAAGCCTTCGTCAACTTCCAAGAAGCATCTATAAGTTGAAGTCATTAAAAACACTCATTTTG TCTGGGTGTTCAAAAATTGACAAGTTGGAAGAGGATATGGAACAAATGGTATCTTTAACCACCTTGGTTGCAGATAACAC TGGTATAACAAGAGTTCCCTTTGCTGTAGTGAGATCAAAAAGCATTGGATATATATCTCTGTGCGGCTATGAAGGATTCT CACGAGATGTATTTCCTTCAATTATACAGTCTTGGCTGTCTCCAGCTAATAATGCTTTATCCCAAGTTCAAACATCTGTT GTGGGTATGTCATGTCTTGATCTATTGGATGAACAGAACAGTAGTTTCTATGGTCTATTATATGCTCTAAAAGATATTCA GAAGCTTCAACGCCTATGGGTGAAGTGTGACTCAGATGTTCAGCTGAATCAAAGTATAGAGAGGATTTTGGATACCTTAA ATACCACAATTTGTGGGGAATTAGAAGCAACCCCAAGCACATCTCAAGTCTCAGCCAATAAGTCCACTTTAGTTGATTGG CACAACCAAGTTCGCATTTCAAGGTCAAAAAAATCATTGACATCTCTTCTGATACAAATGGGAATGAACTGCAGTGTTGC TGATACTCTTAAAGAAAGCATTTTACAGGTTCTCTCTCCACTTTACACACACACCACCTTTACCTGATTAAAGTAAGTAT ATGGAACTAGGGCTGCCTTATTAATGTTTTAAGTATGAGAAATGCTAGCCTTTACACACACACCACCACCTTGAGAGTTG GTTAGACATCACATTAGTTTTTAATTTAGATTAACTCTTGTGATAATTGATGTTTTAACATTGGTATTAAAAAATAATTA TACATCAAAACTTTATACTTAGTACTTACAAATGGGCATATGTAACAGTCTTGGGGCTTGTATGATTTTGTCTGTTTTGT ACATTTAAATACTATTTTATAAAACTTGTTTTACAGAAGAAGAAAAGAAAAACCGTTTGAAGTTTGAACAAGATGTTTTG CAAAGCGTAAAGAAATGTGACTTGATAACTAAGAACAAAAACTGAAAACATCTGAGATGCTATGAGATTATAGTTTAAAA ACTCTAAGTAGAACTATTTATAAGAAGAGTTTTTTGAAGCAGTCTATATCAAACAAGTTTTTTCTCATTTTCTATTTTTA AAAAATAAACTGTTCAAAGAGACCCTTGCTATTTTTAAGTACAATATGAATTTTTTTTTATTTCCTGAAGATGGCATAGA GTACAAGTTAAATTTACAAGAAAATAGGTAATTATGTTTTACGGAAAATATGTGTTTAACATTTAAATTAAATAATTTTA GTATCAAGATATTCAATATTTTTATTTTTTATATATGTGTGCATGTTCATTGAACAGAAAATGTCTCCCATCGAGTTTGG TTTACTTCCGAATAACATCTATCCTGATTGGCTAACATTCAATAGTGAATGTTCTTCTGTGATTTTCAAAGTCCCTCAAG TGGATGGGCGCAACTTGAGGGCAATAATGTGCATTGTTTATTCTTCTTCCCCAGACAAAATCACATCAGAAGGCCTTAAA AATGTGATGTTGATAAATTACACAAAAAACACCATTCAGCTCTATAAGAAAGATGCATTTGACTCCTTCGATGAAGAGGA GTGGCAGAAAGTAGTATCAAATATAGAACCTGGTAACAAAGTGAAGGTGGTGGTTGTTTTTGAGGACAGTTTCTCTGTGA AGAATACAACAGTTTATCTCATATATGATGAACCAATTGACAAAAAGGCAGAGCACTACCATGAGCCTGATAAGAATGCT GTTGTTTCCAGCGGTGATGAAAATGTAAGTAATAATAGTCTGAGATTTTGCGCATTCGAAATGAATGGTTGTTCATATTG TTATCAAAGCAGAATTTCAGTACTGAATTGGAACTGTAAAACAGTTGTGCATGTAACCTCATAAATCTGGTCATGTATGT TGGACACACTGAACTGCTTCAACTGCTAGAATGGATAAAAAACTTTGCACATTTGAACTTTAAGTTTATTTCTTCAAATA GCATTATTCCATTCACGAGGTCATCCCTTTCTCTTTGTTTATGGTTTTAGATATTTGGTAGACTCTTCTTCATACTCCCT TCCCTAGTTAGAGCCGTTCTAACTTCACAGCCTTTCTGGTTCGGTCTGGCTGGTATCTTGATCGGGTCTCGCTGCTTTTC TGATCGGCGAAGGAGTTATAAACCCATTTTAAGGTTTGAACCCATTTCTTTTGCGTCCACAAAATATTTGTATGTTAAAA TTAACTTTTTGCTGTTTATGATATCCTTTGAAGTTTTCCTAAGAAGTTATCCATGCTCAGTAAAAGGCTATCATTCATTT AATATATGTTGAACATTAGTCCTTCCTTTGGGTTTATATTTGGTCCATCTGAACCATAACTCTGAATCAAGGTCCTGATT ATTCATTTCCCTATGAAGTTCATGATTGCATGTTTATTCTTCATAATGAAGCTTTGTTTCAATATTGATTTGATTGCTTA TATTTGAGATACAACTTCTGCTATTTTATTGCTCTGTCTGAAATAGGGAAGTATCATCCGAGAGCGACCAAGGATCCAAT AATCAAGTAGTAAGAGAAGCAACTCTCTCAGGTGATGTACATGATGATATGAAAAGGTGGGATGAAAAAAAGGAATAAAC CATTCCAATATCGATGGGTTGGTGCAAATCTTGAGGCTCAAGGAATCAATTCTGAGCATTTCAAATTTCTGGAAGTCTTT AGACGAATTTCCAAAGCTAGAGGAGCAAAAATTGATTGAAGACAAGAGCCACAAGAATGGAGGTAAAAGCTGAAAAATAT GTATTATTCTTCAGAGCCAAACTAATCCAAGGTGGAGTGCCTTTCTTCGTTCTTCATGTCAATTTATGTGTTGATTGGCA ATGGTTTTTATGTTACTAGTTATAGTTTGTGTTTTACATTCCGCTGTGTTTCAAGTCCACATATGTTGTAATTATTTTAA AGGAAAACTCAAAAGTATTGTTGGTATGTTGAATATGTTATTTTTAAGTGATGCTTTAACAATTTGACTATTGTAGGAAC TTTATATATGTACTAGTAGCAATTAGACCGTGT
CDS sequence (LotjaGi3g1v0212100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTACCATCGCCAAAAATGAAAGTGAGGATATCATGAAAGTAGTTGAAGATGTTACCGATTTGCTAGGCAAGACAGA CTTATTTGTTGCTGAGCACCCAGTGGGGGTAGAAGCCCGCATTCAAGATGTCATTCAACTATTGAAAAGCCAACGATCCA CAGATCCTCTACTACTTGGGATATGGGGAATGGGAGGGTTGGGTAAAACAACCATTGCCAAAGCCGTGTATAATCAAATT CGTCGTGATTTTGAGGCAAAGAGCTTCCTCCTAAATGTTAGGGAAGTTTGCGAACAAAATAATGGCTTAGTTACTTTACA ACAGAAGCTTCTTTCTGATATCTACAAAAAAACCAAGATAAAGATAGATAATGTTGAATCAGGAAGAGAGGAATTGAAGA GAAGACTTAGCCAAAAGAAAATATTTCCTGTGCTCGATGATGTCAATAAGTTGGACCAACTAAGTGCTTTGTGTGGAAGT CGTGACTGGTTTGGCCAAGGAAGTAGAATTATCATCACAACAAGAGATGTAAATATTGTTAAAAAGGAGCTTGGAGTTGA AATTGTATATAGAATAAAAGAAATGAACGACAAGGAATCTCTTGAGCTGTTTAGTTGGCATGCATTTAAACAACCAAGTC CTGAAGATGGTTTTGCCAATCTTTCTAGCGATGTAGTTAAATACTGCGGGGGGTTGCCGCTAGCTCTTCAAGTAATTGGG TCCTTTTTGTTGACTAGGAGGAGGATAACAGAGTGGAAGAGTGTACTGGAGAAACTCAAAATGATTCCCAATAATGAAGT GATGGAGAAGCTTAGAATAAGTTTTGATGGTTTAAGTGATGATGATATTAAAGAAATATTCCTTGATATGGCTTTCTTCT TTATTGGGATGGACCAAAATGATGTGGTTGAGATATTAAATGACTGTGGGAATTTTGCAGAAATTGGAATAAGTGTCCTC GTACAACAATGCCTTGTAACTATTGATAGGAAGAACAAGATCGGAATGCATGATTTGCTACGAGACATGGGAAGAGATAT TGTCCGCAAGAGATCAGCAGAAGGAGGCAAGGAGCCTAGTAGATTATGGTGTTATGAGGATGTGCAGCGTGTATTATCAA AATACACTAGAACAGTGGATGTTCAGGGACTGACTTTGAAGTGTCCAGAAATGGATACAACTTATAATTTGGATGCCAAA GCATTTGGGAAGATGGATAAACTTAGATTGCTTCAACTTGCTGGCGCACAACTTGATGGAGATTATAAGTATCTTTCAAG AGATCTTAGATGGCTTTGCTGGCATAGATTTCCTTTAAAATATACACCAGCAGACTTCCATCAACAAAGTTTAGTTGCCA TCGACTTCAAATATTCCAATCTGGTACAAGTTTGGAAGAAGTCTCAGGTTTCTTTTTTATATTCTTTAAAAGATAGAGTT TGA
Protein sequence (LotjaGi3g1v0212100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPTIAKNESEDIMKVVEDVTDLLGKTDLFVAEHPVGVEARIQDVIQLLKSQRSTDPLLLGIWGMGGLGKTTIAKAVYNQI RRDFEAKSFLLNVREVCEQNNGLVTLQQKLLSDIYKKTKIKIDNVESGREELKRRLSQKKIFPVLDDVNKLDQLSALCGS RDWFGQGSRIIITTRDVNIVKKELGVEIVYRIKEMNDKESLELFSWHAFKQPSPEDGFANLSSDVVKYCGGLPLALQVIG SFLLTRRRITEWKSVLEKLKMIPNNEVMEKLRISFDGLSDDDIKEIFLDMAFFFIGMDQNDVVEILNDCGNFAEIGISVL VQQCLVTIDRKNKIGMHDLLRDMGRDIVRKRSAEGGKEPSRLWCYEDVQRVLSKYTRTVDVQGLTLKCPEMDTTYNLDAK AFGKMDKLRLLQLAGAQLDGDYKYLSRDLRWLCWHRFPLKYTPADFHQQSLVAIDFKYSNLVQVWKKSQVSFLYSLKDRV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 470 | 462 | 5.1E-198 | – | |
| PANTHER | 9 | 470 | 462 | 5.1E-198 | – | |
| Gene3D | 18 | 187 | 170 | 5.9E-32 | – | |
| SUPERFAMILY | 28 | 289 | 262 | 4.6E-63 | ||
| Pfam | 38 | 261 | 224 | 4.2E-35 | ||
| PRINTS | 58 | 73 | 16 | 2.8E-20 | – | |
| Coils | 115 | 135 | 21 | - | – | |
| PRINTS | 135 | 149 | 15 | 2.8E-20 | – | |
| Gene3D | 194 | 279 | 86 | 5.0E-7 | – | |
| PRINTS | 229 | 243 | 15 | 2.8E-20 | – | |
| SUPERFAMILY | 266 | 372 | 107 | 6.8E-13 | ||
| PRINTS | 403 | 419 | 17 | 2.8E-20 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi3g1v0212100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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