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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0251500 |
| Transcript ID | LotjaGi3g1v0251500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant transposase (Ptta/En/Spm family); TAIR: AT1G40087.1 Plant transposase (Ptta/En/Spm family); Swiss-Prot: sp|Q8Y5X8|HIS8_LISMO Histidinol-phosphate aminotransferase; TrEMBL-Plants: tr|A2Q1T1|A2Q1T1_MEDTR Ubiquitin; Found in the gene: LotjaGi3g1v0251500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:42105339..42109731) extracted from Lotus japonicus Gifu genome v1.2.
TGCGCCGTGAAAATCGTCTTCCCCTTCCTCCCGTAGCATCGCACTCGCCGTGAAAACCCTAGTTCTTTGATCGAAGCTCT CTCTGCGCGAAAATGGATCCTCCGATCGAATCTGCTTCCTCTGGGTCGTGAAGCTCTCTCTGTGCGATCGAATCCTCCTC GACAAAGCTCCGTTCGTGCTTCAATCGAACCTGCTTCAATCGCATTGAATCTTCCTCTCTTTGCTTCAATCGCATCTGCT TCAATCGCACTGAATCTTCCTCTCTTTGCTTCAACCGCACCTGCTTCAATCGCACTGACTCACGTCTCATTCTGCTTCAA TCGAACTGTGTCGTTCAACTTCTGGTAAGCTCTCTCTCTCTTTCTCTCTCGTATTAGATCCTCAGCTAGGTCAGATTGAG AAATAGAAGTTCGTTTACCAGTTCCTCTTTCAATTTCGTTTCCATTTTGTTAGAATGTGAATGAGAATGAGAACTTCGTT TCGTTTCAACTGAGTCAACATTGCTGAACCTGAATCAGTTACACGTTTACAGCATTTTAATTCAATTTCTGGTCAAAATA TGCATTTGAATTTTGCAGCATGAGCTTTTGTATTCATATATGATAATCACTCTCTATCTTACTATGTTTTTGTTTCTTTG AGTTTCTGTTTGAATTCTCCTATGTTACTCTCTATTCATTTGAATTTTGAATTTTGCAGCATGAGCTTCTGTAAAATCTA TCAATTCTAAGTTTGGATTAACAAATTTACACATTGTGCAGTAAAATATCAAAACTAAAGCTATCTATCTTATAGGTGCA AATTGTAAATCTACTACATGTAGCATGTTTAGATCAACTTTACTTTCATCAGAATCAATTTTGAAATCTAAAAGCTACTC ACAGAAACTTACCTAATTCTAGCTTGAGAATCAATTTTAGAAATATTTACAAACATGAACATCAGAACATGGTTTATTAG GGGAAAAGCAAAATCTGAAGACAAAGCTTCACGTTATAAGAATAAAGTTCAAGTGTTCAAGTGTTCAAGTGGGGGGTTTG AACTTTGAAGTTTTTTTTTTATTGATAAAGGCAGAGTATAACTGTGAGCCAAGACACTAGTGTTGTAATGGGTGAAAAAA ACACCAGCACGGCAGCACACAACTATTTTAACTTGATCTTTTGCACACTAACAATATTCCTTCTATTCTTATTTTTTATT TATCTATAATCATTCTTTTTGACCAAGCTATTATTTTCATCATTTGACTAACAGGCCTACTTATTACCAAGATATGGGAT AATTTTCACAGACACCATAACATACTATGGGTCAATTACTGAAATAATCGAGCTAGACTACTATGGTAGTTTTATGTTTG TGTTATTTAGATGTGATTGGTATCAAGTTGAAGAAGATAAATACGGATTGACTTGTGTTTATTTCAATAGGAGATGTTAT GTGGATGAACCTTTTGTGTTGCCTACTCAAGTCCGACAATGCTTTTATATTGAAGATCCTTTTGATTCAAATAGGAATTA TGTTATGAAGACCATACCAAGGGATCTTTTTAATATGGTTGATGAATTAGATTCAGATGCCTTGGAATCATGTCAAAGTG AGCCATTAGATCATGCAGTGAACCTTGCAACAGTTGATTCTGATTGCGAAGTTGAGTTGGTTAGGGATGATATGCCTCCA ACAATTACTGAAAATCCGTTGCTTGAGTTAGAAGACTTTGATTTTGACATTCAATCTGAAGATTCTGATTTTGATGACAC TTTGTTGGACTACATGGATTGATGTATCTTTGTCAATTTTTCCCCTTTGTACGATGTTAGTTTGAAGCTGTGATTACTTT ACATTTGGTTGTGAATCTAATGCAAAATTTGACCAAGCCTAGTTTCATTTGCTTTGAGTTTTGGTGTTATTTGTGAGCTG AAGTTCTTTTAAACTGAAGTTTATAAATTTATTAACTGTAAATTTGTATATTTGCAATGTCTTTGAAGTTAACCTTTTGT TGGCTGTTTTGTTTGCTGCTAATTCAAGCTTCTGTTTCTGAAGCTGAGTTTTGGTATCTTATTCTTTGCTCTCTTGATGG TTTACTTTTATGTTATAATTTTGTTTTCCTACTGTTTACAAATGTGATTGATTATTTTTCTATTTTTTTGTAGGAAAATG AAAAGAAGAAGTGATTATGATCTCCAAGCTAAGACTAGTGCTGAATTGCTTCAGCTGTACAAAGTGAAATTGGAAGGTGC TAACAATTTGAAGAAAATGAAGGGGTCTAGTCAAATACAACAGCAAAAGAAAAACCAGAGCCAGCAAAGCGAAGATCAAA GGAAGAACCATGTGAGTTTTAGAAAATCAGTTCAAGTAGAAGAATCTTCCTCTATACAACAAAAAATACAGCAGCAGAGG CAGCAACCGGTGAACTCTACGAAATCTAACCAAGAGGATCATTCTGATGAACAAGGCTCCAAAAAAAAACATATGATGCA ACCATTGAGCACTAGAATAGAACTACAAGCAACTAGATCTACTCAAATTCCAGGCATAAGAGAAGATCAAAGGAAGAACC ATGTGAGATTTAGTACCAGAGGCACACTTTAGAGAGTTGATAGATTATTGGAGGCTTGAAGCAATTAAAGTAAGATATAT ATACCTACAGTTCTTTGATGTTTTGTTATTTTTTCATGTGTAATAATTTTTTAATATTAACACAGGAAATCAGTGCCAAA AATGCTAGAAATATAGCACAGCAGAAATGGAGACACCGAGTGGGGCCTATAAGCTTTGCTTGTATAAGGGAGAGATTGGT ATATCATTGTCATTGCAATAAGTGGGCATTTAAATGTGTATGACTTTTCTGCTAAAATCATTGTCTTGATGCAGCGTGCA AGCAAAGAGGATGGAGAGAGCTCTACTCAAGCTGATATTTTCATTGAAACTCGTAAAAGCAAGAAAGGAAAAAAGGTGGA TGAAGAAACAAATAATGTGATTGTAAGTTTCTTTCTTTGATTTATTTTTTTGAATATGATTATGCATATCCTCAACTAAC ATTACTTTTAAATTTGGTAGACAAAACTTCATGACTTGGTTGAAAATTGTGGTCAATCTTCTTCTGAAGCTTTTAAGCAA GTGTTTGGCGACGAAAGACCGGGGAGAGTGCGATGCTACGGGAGAACTATGACACCAAGTGTCTTCAAAAGGAATAATGA AATAGCTGAAATTGAGAAAAAACATGCGAAGGAAGTCCAACGTTTAACTGATAAGGTGCATGACATGGAGGCAAAGCATG AGGACATGGAGCGAAAATTTCAAATTCTTCTACGGACCATGCTGAACCATACTGACAACGCAGTTGATTTGGATCCTTTA GCTGCCTTGTTACTCCCCAGTGATGACAATGGCCCTCTATATTCATCTACATCTGTGCATGCTCCAAATAATCAAGAGGT AAAGTAGAGTTGCATGCTATTTTTCTCTTCTGATTTGATCTCTTTGTCATATTCATGGATTTATCATTGGGAGGCTTGGA AGATCCTCAAAGTTCTGTTGTTGTGTTTTGTAATCAAGAGGGATTTCACTATTTTCAGCAATGAAGATGCTAGTTCCTAC CATATTCTTACTTTGGTTTGCTTAGTATTGAACAGTTGGCATGCCTGCCTAGTAGAAGCTGAAACATGACAACTAGTTTA TTTTCTTATTCTAAGTCTGGTAATTGAATGTAAACTATTCATGTTCCCTTGTACAGAAGAAAGGCCACAATCATGGTGCA ACGGCCGAGACGTATTTTCTCAATTCTTCGTCAAATGAATTAGGATGATATGGCCATCATTTTTCACTATGCTTCTTGAT TGAATGTAAATTTTTTATTCTTGTTACACATGTTTTATGTACTTCACAGTGACTGATATATATGTATATATTTTTTGTTT GTAGCAAAATGATGGTGGCATGATGGCGGAAGAAGATGATGCTACACTTTGATGGTGGAATTTGGATCCTGTAGTTTGGA TCTTTAGTTTGGATCTTTAGCTTATTAGTTTGGATTATTAAATTTGTTGGATTACATGGATTAAATTTTCCACTCCTTGT TGGATTACGTGGATTTAGATGGTTATGGAGGATTGCAAGATTCTATCTGATAATTTCTACACAAGTCAGTTGCTGCAGGT TAAAAGGAATTGCAACAAAGCTGCTGATTTTATGTCAAAATATGCTCTTTCTTTTGTTAATCATGTATGGTTCTCAATAT GGGTCCATGCGGTCTAGGACAAATTCTGTTAGATGACTGTGGGGTTCCCTCTCAATTTCCATTTCAATGAATGAAATACT ATTTTAATTAGCAAGTATATAATTGTATTCAATTTGATGACAATATTTTTTATGAATCTCCCCATATCAACAA
CDS sequence (LotjaGi3g1v0251500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGCGTGCAAGCAAAGAGGATGGAGAGAGCTCTACTCAAGCTGATATTTTCATTGAAACTCGTAAAAGCAAGAAAGG AAAAAAGGTGGATGAAGAAACAAATAATGTGATTACAAAACTTCATGACTTGGTTGAAAATTGTGGTCAATCTTCTTCTG AAGCTTTTAAGCAAGTGTTTGGCGACGAAAGACCGGGGAGAGTGCGATGCTACGGGAGAACTATGACACCAAGTGTCTTC AAAAGGAATAATGAAATAGCTGAAATTGAGAAAAAACATGCGAAGGAAGTCCAACGTTTAACTGATAAGGTGCATGACAT GGAGGCAAAGCATGAGGACATGGAGCGAAAATTTCAAATTCTTCTACGGACCATGCTGAACCATACTGACAACGCAGTTG ATTTGGATCCTTTAGCTGCCTTGTTACTCCCCAGTGATGACAATGGCCCTCTATATTCATCTACATCTGTGCATGCTCCA AATAATCAAGAGCAAAATGATGGTGGCATGATGGCGGAAGAAGATGATGCTACACTTTGA
Protein sequence (LotjaGi3g1v0251500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQRASKEDGESSTQADIFIETRKSKKGKKVDEETNNVITKLHDLVENCGQSSSEAFKQVFGDERPGRVRCYGRTMTPSVF KRNNEIAEIEKKHAKEVQRLTDKVHDMEAKHEDMERKFQILLRTMLNHTDNAVDLDPLAALLLPSDDNGPLYSSTSVHAP NNQEQNDGGMMAEEDDATL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 32 | 32 | - | – | |
| PANTHER | 3 | 130 | 128 | 5.2E-14 | – | |
| PANTHER | 3 | 130 | 128 | 5.2E-14 | – | |
| Pfam | 5 | 77 | 73 | 2.6E-9 | ||
| Coils | 90 | 124 | 35 | - | – | |
| MobiDBLite | 152 | 179 | 28 | - | – | |
| MobiDBLite | 152 | 168 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0251500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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