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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0260800 |
| Transcript ID | LotjaGi3g1v0260800.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transthyretin-like S-allantoin synthase protein; TAIR: AT5G58220.1 transthyretin-like protein; Swiss-Prot: sp|Q9LVM5|TTHL_ARATH Uric acid degradation bifunctional protein TTL; TrEMBL-Plants: tr|I1MM35|I1MM35_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0260800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:47616470..47623898) extracted from Lotus japonicus Gifu genome v1.2.
GACTTTTCACATCATTTTTAACTTTTCTTAAATTTCTTTAATCACTCGTCCTTCTCCTCCTCTTTCCGCTTCTTCGTCGT CTCTTCATTTTCGTGCTCTCACCCAACCTCTACAACCACCGTCCACCGCCCAAAGACCTGAAACATATTTAACTGTTTAA TAAATTAATTATTAATTTTATTATTATTATTATTATTATTAATTTTTATTTTATTTTATTATTTTGTCTTGCTACAAGAG GCAGAAAAGCTCACACAGCAGCACAGCTATTTTTCCCCCAAAACCGCAGGCTAATCCCCAAAGCAAGAAAGCATTTTGCA ATCGAGTTGTGTAGGTACACAGCTGAAGAGTATTTATTAACAGAAGTTAACCAAGGTTTGAAGAATGGAACTGGGTTTTG ACGAGAAGGACTATTTATCATGCTGTGGAAGCACCATATTCGCCAAGGAAATGGCTTCAGCCTCTCCTTTCTCTTCCTTT CAGCACGCCATTTCCATTGCCAGAGACATTTGGTTCAACAGCGTTGATGTCAATGGTTGGCTTCAAGCTTTCTCTGCTCA CCCTCAGATTGGTCAAACCCATGCTCCCTCTCACGCCTCGGAAACCAGTGCTCAGTTCAGTAATGAATCCCCACTCTTTT TCCCCATCTGGGTCTATTTGTTTTTTGGTTATTGATATGAAAACTCATGACTTTAGTGCTTATGTTTTGATTTTTTTTGA AGGGTTTGTTTTTGTTTTTGTCTCTTCATTTGGAATTTTCAGATAGTAATGGAAATTGTCTGTTCAGTGGTTCCTCCCAT TCTGTTCTTGTTTAGATTGATGTGAGGAACTTGAATGAGTACTGAGATGGTGTTTGCTTGTGTTTTAATTTTGGATTTTT ATGATAGTAATTGAGTTTGTCCTGCTTACATTTTACATTGATGTGAAAAACTTGAATGTGCAATTAGGTTGTGGTAAAAA GCTTCAACCATTGTTCACTTGTTAGCACTAGTAACTTCTTTTCCAAACTGCTTTTGGCAGGTGGAGTAAGGGAGAACAAT CAACTGCATTAGCAACTGCTACTGGTTCTAGCTCACAGGTTTGCTTGCTGCTGCCCTTAAATAAACTTGAAATACTTTAA TGCTATTTGCTGTTGTATGAAATATGCCGAAACTGATTGATCTCTGGATCTGCTATCAGAATACTTTAGATAATTTGTAT AAGGGTATTGAATTGAAATAGCACTACCTTTGAGAGAGTTCAACTTTCTTACTAGGTAGTGCATATGGTTTCAATTTTGG ATCCTTCATTTGCTGGTCCTACGTTATGGTGTACTTTATTATTATCATGGAGGAACTATTTGTCCATCTGAATAACTGGG CATGGGATGAGGCAACAAACATGAGGTTCTGGCTTTCTGGGGGCACTTCAACTTCTATGTTAACTGTTCATAAATGAAAG TTAGTGATTTATATGCTCTCCATCTAACTTTTGTAGGAACTATCCGAATGGAATGCTCGATATATGCAGAAGTTTGGGTT TGTGTTTCTCATATGTGCATCTGGGAGAAGTACTGATGAGATACTTGCTGAACTGAAGGTAAATTTGAACTTATAGTCTA GTGTTGGCAAATGTTTTATTTATGGTCTTTGTAGGTGACAATGTACATCTATTTCTTATTCAAAGATAAAAAAACTGCAT TGATTAGTTTTAGAGGATTGAGCTGGTGAGAGTTTTGGTATTTTTTCTTTTTATCTTAAAAACATTTCAAATGATAATAC GGGTGACATTTTTGGATTTGAAATACTAACCAGTAGTAATTTCTGGAACCTTTCTTGGTGACATTGTTTTGATGGATAAA TGAATGACTAATATATTTTCATAGAAGAGTACTTCATGATGTCAACAATTAGTGCATATGGTTCAAAATGGACGCCGCAC CAACAGAGTGTGAAATTCTACAAGTTGCTAGAAGTTTTTTTGTCTTGAAAATACCTCTTATAGAAAAGGGTGTACAACGA GTGATTTGGAAATTTTGGATAAACTTATTCTTTGGTCATCGATCACCCATGATCAATATGTGGTGCTAACTGCTCATATT ATGTTACTTAAATTAGAGTTAAAGAAGAAAGTGTTGACTTTCTTCCATATTCTACCACCTCTTATGGTGCTAATTTAGCT AAGAAGTTTCCGAATATCTTAAAAGAGTGAAGTTTAGATATAAAAAAAATCACTCTTACTTTACGATGTGTCTTAGAATG ACAGCATGGTAAATTAGTTGTTAATAGAGATTATTTACATTAGGTGTGATGCATATATTTTAAACTTGATTGTTTAAGAA TGTTTGAAAGTAATAGATGATGCTTTGACTAAAATCCAAAAAATTGTGGAATACATTAGTGGATAGATGCACAAGAAATG AAGTTTGTATCACCACTATCATGTTTAGAGCTATTCTCCCATGTAGTTTCTAAGCAACTTGGTCAAGATGTGCCCATAAA ATGGAACACCATATTATTTTTTTGTACGAGGGTGCTATAGGTTTTCAAGAAGTCTTTGTACTAAGAAATATAGATCCCTT TTTTTTAGTTGTTTGTTTATCACAAGAGGAGTGGGTTCAAGGAATAATAGAGTGCTTAAAGTCTTTTTATGATATCACCC CTCGTTTTTCATACAATAATTTTGCAACTGACAATTTATATTTTTATGGTATATGTAGGACAATGTAAATAGGATAGACC CACCATTAGAATACATTGCAAGTCTAATGCCATAACAACAATGGCCCTAGTTATGATAATGTGTGAGCCTGTGAGGTTGT TACAGTCTTCTTATTTCGAACATTTGTGGGATGGATATTTTGATACATTCAAACTACTCAAATTCTTCACTACAAATGAA GAAAACTAAACAAGGTTGTATAAATATGAGAGAGAGAATTGTATAGAGATAAAACATTGAGGAGAAATTATGGAGTTAAA AAAGGGTAGAGAAATAGTTTTTTGGATGGGTTGGATATAAAAGGGCAAACCTGGTGCAATAAAGCTCCCTTTATGTGCGA GATACGATCAGAGGCCGCATCCACGTAGGCAACCTTACCTTGCATTTTTTGCAAGAGGTTGATTCCAAGGCTCGAAGCTG TGTCTGCAAAGTCAGCAACCTTACCGTTTTAGCGAGGTTTGCATTTTTGGATGGGTCAGATACATCAATCCATAAAAACT TATTTAATGGATGGACTTGTCAATTTTACTAACTGGGTCATGGATGAATTGAACTTTTTCACAGATTCTTTATTCTTAAC CGATCATGAATGAACTAATGATTTGTTTTTGGTCAATCGATTATAAGGCGATTCATAATTTATCTAAATCATCTGTTTTA CCCCCCGTCCTTTATTAGAAGTAGATGCTTTTCCCCTCCATTACTATCTCTGATCTATTCATGTCTCAATCATTACCCAT ATATTTTGAAATTTTCAGTAGTTAAAGAACATAAGTGATAGAGTCAGGAATTTGTTACTCTGTTGATTTAAATTTAAATT AAATTTTTTTACACTGGACAGAGACGTTATACAAACAGGCCAATTGTTGAATTTGAGATCGCTGCTCAGGAGCAAATGAA AATTACAGAACTACGCCTTGCAAAGCTCTTTTCAAGCAGAGAAAACACTTCTTCTACAACTGATAAGTATTCCACTATTG TTGTTAAAAAGGCAGAAGGTACTTCAATGTCTTATGTTTGGTTATTTTAAATAGCTCTGTGTTCTGTCTGATTGTTTTGA TGACAACCCTTGTACTATTAAACATGATCAACCCAACTCATCTACTCATACTTTAACATGATAGCATTATAAATAAAAAA TATGATATATCATCTGCCGTTTAGAATCAACCATCAGAAATATTTATACCTATAGACATAATGATTTTTAACTCATTGAT TTATAAAATATTTATACCTATAGTTTATTTTAAATATTATTTATTATTATATAACTAAAAGTCTAAAAGGTTTCTGATAG GGTCAAGAGGATGCAGAAACCTCCTATCAGTAAAGTCTATGTCAGACGCAATAAGGGGAATTAGCTTAATAAGGGGAATT AGCTTAATAAAGGGGAATTAGCTTAATAAACCTTGTGGTTAGGGAAACTATAAATAAGAACCTATGGTTCATAGTTAGTA AGCTTTTGCATATTGTTAGGTTGTGATAACTGAATCAGGGGATTCAGTTGAGCTTCTCTGTTTCTGTTATCTTCTTCTTT CTCAGTGTCCATCTTCTACCAAGCTTTCACATTCAGATATTGATTCAGTTCTGCATTTTTCTGTGGAGTTTTCTGCTACA GTTGTTAGTCTTTTATTTTCCAGTGCTATCAGTTTCAAATGTAAACTAGGGGTATTTTGTTAGTCTAAATTTTTGTAATG GTGTTCAGTATTCTGTTCTCCTTGGTTCCTCCCTTTTCGATGAACCAAATTGTACCATTCTAAGAGCCTTATGTTCTGTT CTGTTCCGTCTTACAAATATAACAAACATGGAATAGAACCCTGTGTCCCGTTCTGATCTGTCTACCAAAAAACACTACCA TAGTTTTGTTATGCATCATTCCAGTTCGCACTTCACATCTTTCTCTAACTTTTTTATCAGCAACAAATAACTAACATAAA AGGGAGTACAAGGGGTACTCTAAGTCTCTAACCCTTACACCAGTCAAGAACCAGAAACTTCAGCTCACAAACCAAGCATG AAGCCAAACAACGGGGAGACAATTACAAGGAGATAGAAGTTAAAGGATTCTTAGACCACGTAAAATAATGAGCATGCTGA GGCAAAATTTCTGCTGCTGTTAACCATCACCATGGTATCAATTTAATCCTTTCCAATTGTTCAGCCACATCAGGCCTCAC ATTCCTAAAACATGCACAGTTTCTGGCACTCCAAACTTCCCAAAACACTGCATAAACAACATAGATCCAGGCTTCATTCA ATCTTCTATTGTCCAGCATGCATTGATTGACAGTACCAAAATAAATCCCCGCAAGAATTTGGAGCTGCTGTACTAATTCC CCACCAACCAAAACAAGCATACCATGTTTGAGATAGATTAAGTTTTCTATTTTCTGTCTTGTAAATATTCCTGCAGTTTT AAGCTTCCAAATGCCGTTTCTTATGAATTGGCATGCCAAGAGTTAAAACATTCTAATGTTAATCATTGCTTTAACAATGT TTCAATGTATAGTTACTTTTTTTATCAATATAAAATTGAAATTTAATTAGTAAGGAAGAAGGAATACAAAAACAAGGATA CATATCCTTCTCAAACAAAACAAAATAATACTGAAGTACTCTTCCATCTGTTAGCAGTCTTGTAAGGAGGTTCTCTGTAA AAGGCAAAAAAACCGTGTGATGAGCACCGCGGTTGTAACAATTTAATCCTGTCCCATGGTAGTTTAAGGACCAATTTCCT CATGAAAACCGGACCATATTGCACTTGCACCTACCAAATATACCAGAGAATGACCAGGCATGATGCACTCCCATAGAAGT TTCTTTCTTGACTGCTGCCAAAACTTATAACATTCTATCAACAAGGTTCACCAAGTCCATGAAAACCCTACTCCCCATGT AATTGGCTTCTAGGCTAAGTAAAAAAGAAGTTCACGGTTGTTTCTATGTGAAATATGAACAATTTAACATGTTAGCAATT GTCCATCTATGTATTGCTATGCCACCCTATGATTGCACTTGGACCCTTTTCCTCATACTGCCTACCAATGGGTGTGTTGT TTAATCGTGTGGTACATGCTCTTAACCCCTGATGTTCTGCCATTTGTTTGATTCCTAGAACCTACACAACAGTTAAAACT GAACAAGGAATTCTGACAATGTATATTCAATTATCCCTATTGTTAACTGTTCAAAAGGGGAGCCTTGCCGCCACGGTTAA AGGTTTCTGCCATGTGACTAAGGTCTGGGAAACAGTCTCTTGTGTAAAAAACAGGGTAATGCTGCTTAGAATAGACCATG TGGTCGAACCCTTCCCCGGACCCCGCGCATAGCTGGAGCTTTAATGCACCGGGCTGCCCTTTCTTTCCTCTTGTTAACTG TTCTACATGCACTGAACTGAATGATACAAAATTGTATCACCTATTATCCCCTTGATCTGTTATTAGTAGCCAATAAATAG ACATTTTTTTTTTCAAATGCATGTGGTGTGAGTGTTGAGTACAAAAATTCCTATTTCAGTATTTTTCCTGTCATATCTTG ATTTTTAATTTTCCTAATGCTAGAAGATCGTATAGGCATTATTGGTGGTCATGTAACTGCTGCTTCAGAAAATTCAACTG GAAAATCACTTCAAACTACTGCTAGATCCCGCCCACCTATTACCACTCATGTGTTGGATGTTTCGCGAGGCTGTCCCGCT GCTGGTATGGAAGTACTTTTGGAGGTGTGGAGAGGCAGTCAGTCTCGACCAACATTTGGGGCCGCCGGCGGTGGCAGTTG GGTGGTTCTAGGGTCATCTACAACAGATTTAGATGGTCGGAGTGGTCAGCTGTTGAGCATCGTGGACGATGCGAATCCAG GGGTATACAGGATAAGTTTTAACACCGGGAAGTACAACCCAAGCGGTTTCTTTCCTCATGTGTCTATTGTGTTTGAAATC CTGGAGTCACAGAAAAAGCAACATTTTCATGTTCCTCTGTTGCTTTCACCATTTTCATTCAGCACTTACCGTGGAAGCTA GAAATATAGGAACTGTTGTCATCTCGTGTGGTGCCATGAGAGTTTTCATAAGTGAACTTGTGTTTGTGCTTGTAGAACAA GAGAAGGGCACCAAATGTAAAGAGATAATAATTGGTGTTTGTTTGATTTGTGTTATCTTTACTCTAGGAATATAACAATA GAGACATTTTAAAAATGATGCAACTAAGAGCATCAACAATGGTGGTTGCTTAGCCATAAGCAACCTGTTTATTTTTTTTT TCTTTTCAATTGGAGCATGCTTATGTGTAAAATTGGTTGCTTAAATAAAAACAACAATGGTTGCTCCCACAAGCAATAGT TGCTTAGAGTATTTTGTGATTTAGGTGCGTCAGTTTTAAAATTAGCTCACCGTGGTTCAAAATAGCTCAAATGATTTAGA TGCGTGGGATTTAACACTTTTTAAATTTAAAGGCTCAGGTTAATTAATATTAAAATAATTTTTTTATTTGTTGGAGCCTG GGCCTGACTTACAAGTGCTTCTCATGAAGCATGCTATGGGTGCTTTGTAGTTTTGTTTCTTTGCCTTGTTAATCTTCCGA TGTATCAAAAAAAATGATTTTGCTTTACTTAAACACCCTTCTCCCCACCTCTCTCCCAACGAACACGCTAATTCCAATGG AGTTGTAAAACCACCGAAAACAGAACCAGAATTGGGATCTCACACATTGAAAAATAGAAATGGAAGAGA
CDS sequence (LotjaGi3g1v0260800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACTGGGTTTTGACGAGAAGGACTATTTATCATGCTGTGGAAGCACCATATTCGCCAAGGAAATGGCTTCAGCCTC TCCTTTCTCTTCCTTTCAGCACGCCATTTCCATTGCCAGAGACATTTGGTTCAACAGCGTTGATGTCAATGGTTGGCTTC AAGCTTTCTCTGCTCACCCTCAGATTGGTCAAACCCATGCTCCCTCTCACGCCTCGGAAACCAGTGCTCAGTGGAGTAAG GGAGAACAATCAACTGCATTAGCAACTGCTACTGGTTCTAGCTCACAGGAACTATCCGAATGGAATGCTCGATATATGCA GAAGTTTGGGTTTGTGTTTCTCATATGTGCATCTGGGAGAAGTACTGATGAGATACTTGCTGAACTGAAGAGACGTTATA CAAACAGGCCAATTGTTGAATTTGAGATCGCTGCTCAGGAGCAAATGAAAATTACAGAACTACGCCTTGCAAAGCTCTTT TCAAGCAGAGAAAACACTTCTTCTACAACTGATAAGTATTCCACTATTGTTGTTAAAAAGGCAGAAGAAGATCGTATAGG CATTATTGGTGGTCATGTAACTGCTGCTTCAGAAAATTCAACTGGAAAATCACTTCAAACTACTGCTAGATCCCGCCCAC CTATTACCACTCATGTGTTGGATGTTTCGCGAGGCTGTCCCGCTGCTGGTATGGAAGTACTTTTGGAGGTGTGGAGAGGC AGTCAGTCTCGACCAACATTTGGGGCCGCCGGCGGTGGCAGTTGGGTGGTTCTAGGGTCATCTACAACAGATTTAGATGG TCGGAGTGGTCAGCTGTTGAGCATCGTGGACGATGCGAATCCAGGGGTATACAGGATAAGTTTTAACACCGGGAAGTACA ACCCAAGCGGTTTCTTTCCTCATGTGTCTATTGTGTTTGAAATCCTGGAGTCACAGAAAAAGCAACATTTTCATGTTCCT CTGTTGCTTTCACCATTTTCATTCAGCACTTACCGTGGAAGCTAG
Protein sequence (LotjaGi3g1v0260800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELGFDEKDYLSCCGSTIFAKEMASASPFSSFQHAISIARDIWFNSVDVNGWLQAFSAHPQIGQTHAPSHASETSAQWSK GEQSTALATATGSSSQELSEWNARYMQKFGFVFLICASGRSTDEILAELKRRYTNRPIVEFEIAAQEQMKITELRLAKLF SSRENTSSTTDKYSTIVVKKAEEDRIGIIGGHVTAASENSTGKSLQTTARSRPPITTHVLDVSRGCPAAGMEVLLEVWRG SQSRPTFGAAGGGSWVVLGSSTTDLDGRSGQLLSIVDDANPGVYRISFNTGKYNPSGFFPHVSIVFEILESQKKQHFHVP LLLSPFSFSTYRGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 6 | 163 | 158 | 1.7E-57 | ||
| SUPERFAMILY | 11 | 161 | 151 | 5.76E-40 | ||
| PANTHER | 12 | 334 | 323 | 5.0E-65 | – | |
| PANTHER | 12 | 334 | 323 | 5.0E-65 | ||
| Pfam | 13 | 157 | 145 | 8.5E-30 | ||
| MobiDBLite | 64 | 91 | 28 | - | – | |
| Gene3D | 202 | 333 | 132 | 3.8E-35 | ||
| SUPERFAMILY | 209 | 334 | 126 | 4.19E-32 | ||
| CDD | 213 | 334 | 122 | 5.92662E-47 | – | |
| TIGRFAM | 214 | 334 | 121 | 3.9E-27 | ||
| PRINTS | 214 | 234 | 21 | 4.3E-8 | ||
| Pfam | 215 | 333 | 119 | 9.1E-31 | ||
| ProSitePatterns | 218 | 233 | 16 | - | ||
| PRINTS | 312 | 334 | 23 | 4.3E-8 | ||
| ProSitePatterns | 317 | 329 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Purine nucleobase metabolic process | The chemical reactions and pathways involving purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine. | ||
| Molecular function | Hydroxyisourate hydrolase activity | Catalysis of the reaction: 5-hydroxyisourate + H(2)O = 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate + H(+). |
Expression pattern of LotjaGi3g1v0260800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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