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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0263100 |
| Transcript ID | LotjaGi3g1v0263100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BED zinc finger,hAT family dimerization domain; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp|Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2; TrEMBL-Plants: tr|A0A151RXE3|A0A151RXE3_CAJCA Putative AC transposase; Found in the gene: LotjaGi3g1v0263100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:48739860..48747520) extracted from Lotus japonicus Gifu genome v1.2.
CAACTTTCTTCTCCACTTTCAGATCACGGCTTTCTTCTCCTCTTCCAGTTCTGCTCCGTTTCCTTCTTCCGCCCACGGAG CTGCCATTCTCCTCTTCCACTCTTGCTCCGTCTCCTTCTTCCGTCCACGGAGCTGTCGTTCTCCTCTTCCAGGCCCGCTC CGTCTCCTTCTTCCGTCCACGAAGCCACCGTCCAAGCGTCCACGCCTCCACGGAGCCGCGCGTCACCTCTGCATTTTTTC TCAGACCCCATGCACAAGTAATGGCCATGGCTTTGTTTCTCTGACCGTGGTTGATTGAGTTTGATTTTCAATTCATCTTT TTATTTTTTTAATATCTGAGATGAAAAGGGGGTTATTTTAATTTAATTTGATTTCATAGCTTCTAATTGATGATCAAATT TGAAATATTGCTTATCTTCAGTTGGTTCTGGAAACCACCTTTGATTGATTCTGCATTCATTCAATTTCAAACCACCCTTC TTCACATTCACCTTCAACTGAACCACCATATCCTCTTCTTCTTTCCTCTGCCACTAAAGAGCTGAGATTGCTTGATCATG CTTCCAATTATTCTGGGATTCATTTGTCCTTCACTCTTCAGGTATTTTCCTTGGAACTCAGCTCATCTTTTACTATCTTT TCATGTTTTAGTTTTAGAGTAAATAGCAAAGTTCAGTTACTGTTATTAATAGAATAGAATACGTTTAAAGTACTTGATCT TTTGTTCAGTTTAATCAAATACTCTGTAACTGTTTCATTTCACCAATGCCTTAATACTTGATGGTTTGGTTATTGATAGG AAAGGCTGATGTATGGTAAACAAATATATTCAAATTTGGAGGTGTCTGGAGCAATTATTTGTGCATTTACCTGGTTTATT GCTTTATGAACCTGAGGTTTGAGCATTTAAGAGCCTAGGAAGATTGAGACTGAGAGGTTAAAAACTTAAACAATTACCAA CTTCCCATTACAAGATCTTTGAATGTGTTGTATACTTGTATTAGCTGGAAAGTTTAAAGGGTCTATCTTGGTTCTGAGTT TTTATCAGTTTATTGAGCTGTTCTCTGAGAAAAATATCAAATTGATATTCTTTTTTCCAAAGGAGCCTGAAGCTTGCCTT GGTTGTTTGTTATGCTTTTCACTGTTTAAAATGTAGTTGCAAGGTATAGAAAATTTTGACTGCACTTCAGGAATTTTTAG ATGCTTACCCGCTTCTTCCACTAGTCTAGTACAACTTGAACCTAAGAAGAGACTATATTGAATTTGGATCAACTTCAAGT GTTGTTTTTTTTTTTGAACGTTTTCAAGTGTTGTTACTTGCATAACTAGTAGAAATTCCCTTCTTATATTGCTACTTGTG CTAACAATTTCAGTTCCAAAATGTATCGGCTTGATAAACATAGATTAACTTATGTGTTGGCAGTGCTTGAATAATGCCAT GGACCTTTTACAGTTTTACTAGATAAATATGTCAGTAAGGAATGTCTATTACTTTCATAAAACATCACAAATTGTTGGAT TTGTATTAATTAGCTTTGTATCTTACGTTACTTTGGTCAGATTCATTGTATATACATCAAATAGTGAAATTAAAATCTGT TCATTCATGATTAGATTAACATATATATATATATATATTGATATTCAGTTGTCTGTGGTGTGCATTCACACATGGTCTTC ATTCTGCTCTCTTGTAAGTAAGCCATTAAGAAATAGCTTATTCTGTTTGAACTTTGAAGGAGCATGTCAGCAAGATACTA GCATGAAATTAGGATTCAAGAAGATTAATTACAAATTTGGAAATCCATGTTTAACCATTAGTGAGTATTCTCTTTGCAAA CATTGTTGTTTACTTTTTCTGATTTTGTTATTGATGTTATACGGAAAATGGATCAAGTGAACACAACTCCGGAAGGAACT TCTAATCCTACACAAGAAAGCATGTATGAACCAAGTCCGGAAGGATCTTCTAATCCTACACCTGAAGGTCTGTCACTAAA TGATTCAACTCATGATGGGCAAGATGCTGCAGATTCAACACAACCTCCAACAAAGAAGCCAAAAAGTGAGGTATGGAATG ATTTTGATAAGGTTAAAGTGAATGGGGAAGTAAAGGCAGTATGCAAGTGGTGCAAGAAACATCTTAGTGGCAATTCAACG TATGGAACAACTCACTTGCGTGGTCATGCAAATAGGTGTATTCAGAAGTTGATTAAGACGAGAGGCCATAACAAAGGGCA AACATTCATCATGCCTAAAGCCATCCAAGGCAAGCAAGAGATAGGCTTTGGAAATTATGATGCAGAGAAAACAAAGAAGT TGATTGAAAATGCAATTGTCATGCATGATTATCCACTATCAATAGTGGATCATATTGGTTTTAGGAGAATATTAGGTTCT CTCCAACCATTGTTTCTAGTTCCTAGTCGAAACACTATCAAGAAGGAGATTTTGAAAATCTATGATATTGAGAGGCAATG TACTATGAAGATGTTAGACACTCATGAAGGAAGAGTGGCCATTACCACAGACATGTGGACTGCAAGCAACCAAAAAAAGG GTTACATGGCGGTCACAGTTCACTACATTGATGGCACTTGGACTTTACAAAGTCGAATTTTGAGGAAATAAAGTTTAAAT TTCTTTTATCCTACTAGCTGTTTTTGTATGATAAAATTTTTAAATGTAAGTTAGTTATTTATGTTCCTTGTTATTTTAGG TTCATTTATGTTCCAGCCCCTCACACGAGTGAAAGACTTTGTCAAGTACTTGTTGAATGTTTGATGGACTGGAACATTGA CTCAAAATTGTCTACAATCACTTTAGACAATTGTGCTGCAAATGATAAAATGATTGACCTTGTTAGGAATAAGTTGCAGT TGGAGTCTTTGATAAAGGATGGGTCTTTATTGCATATGCGTTGTTCTGCGCATATCTTAAACTTAATTGTTAAAGAAGGC CTACAAGTGGTGAAGGATGGTGTAGAAAAGATTCGGGAGAGTGTGGGGTATTGGAATGGTACCCCAAAAAGGCACGAAAA ATTTGAAGAAACAGCTAGACAATTGAAAATTAATTGTACTAGAGGCTTAGTAAATGATGTTCCAACTAGGTGGAACTCAA CATTTAAGATGCTTGAGTCTGCCATACCATACAAGGATGTATTTGTTCGGCTAGCTCAACGTGAAAAGCTATACACTTGT TTGCCAAGTAATTCACAATGGCAATTTGCAAAGGATGTTTGTGGGTGTTTAGGATTGTTTAATGATATAACTGAGTTGGT TTCTGGTACCAAATATCCAACTGCCAATCTTTATTTTCCCAAGATTTGTAAGATTAAGTTGGAAATAATTAGATGGCAGA GCTCCTCTAATACATTGATTAAGGAGATGGCAAATAGGATGATGGAAAAATTTGAAAGTTATTGGAGTGTGATACATGAT GTCATGGGAGTTGCTACAGTTCTGGATCCTAGGAACAAGTTGGTAGTGCTTCGGTTCTATTTTGCAAAGTTGTATGCTAA CAACTCAGTTGCACAAGTGAAAAGAATCCAAGATTTGTGTTATGATTTGCTCTCTGATTATCAAAGCAAAAACAATTCTA TTGAAAGCTCTCCATTGATTGATACTAATGTTGTTCATGATGACCCTTTGGAGGAAGAATGGGAATCGTATGTTGAGAGG GAGGAAGAAGCTAGCTCTACAAATACTAAATCTGAGTTAGATCATTATTTTGGTGAGAAAGTCTTAAAGAAGGCACCACC TGATTTTGATATTTTAAATTGGTGGAAGGCAAATGGAGGACTTTACCCAACACTTCAAACAATTGCAAGAGATGTGTTAG CTATTCCTATCTCTTCAGTAGCTTCAGAATCGGCATTCAGCACTAGTGGTCGAATATTGAGCCCTCATCGAAGTCGACTT CATTGGACTACTGTAGAGGCTTCGATGTGTGCTAGGAGTTGGCTATGGTCTAATGAGAGTGATGGTAAAATTTTAAAATT TTAATTCAATATCATTTAATTTCAAATTATGTTTATATATTGTCAACTAATCATTCTTTGGTACTCTATGTGAGATATTT GTAGGGAATTTGAATTCTAGTGTTGCACAAGAATATGCTACGGTATTAAATGAAATGGAGTCCGATGACGAAGGTATTTT ATTCTTCATTTGCTTTGAATATGTTATTAATGTTAAGCTTCGATGTTTTATTTAATTTTGACTTCTTATTACAGCTGAAA TAATAGATGGTTTGAGTTACCGTTTTGATGATTAATAGCTACTGCATCTATGCTTTAATGCATAACACGGTTAGTATTAT TGTTAACTTTGATTACAATAACTTGTTTCAATGTTGCTTTAAGAAAAATTACTAATGAGCTGCTTAACGTGAATATAACA AGTTGATGTTGAAGATTGTGGACTTTAGATAATTGGATTGAGCTATTGAGAACTGTTGTTTTAATTTGGAAGAGGGTGTT GTTGAAGATTGTTGTTTTAATTGTATGCTTTGAGTTTTTCCTTGTGTTGGATTTATGCTTGATGTTGAAGACTTTGAATT GTTGAGTTTATCTCACTTTTATTTTACTTGTGGTTTTCAAATGTAATTGAGAAGCTTAAGGACCCATGAATTTTGTAATT GAGAAGATTAAGACTGTTGTTGTCTTTTTAATTGCTTATAATACTATGATTGAGGCACTTGCTAAGGGTCATCATGCTCT TCAAAAAAATGGTGGAGAATAATTGTCAGCCTAATGAATTTACATACAATGTGTTTTTTCTGATTTTGATTGTAAAAACT AAAAAGCAATGAAATTTGTTAAGAAAGTAATGTTATTCAAGGTTAGACCGGGTTGCAACCGGGTCGGGTTTTATTCTTCG GGTCAGGTTTCCGGGTTCAGCTGTTTGTTTGAGGTCGTGTGCGGGTGTGGGTACGGGTCGGGTGAACCCGAAACCCAATG GGTTCGGGTGTGGGTTTAAGTTCACCACCCATTTCGGGTTCGGGTGCGGGTGCGGGTTTTTGATTTCGGGTTTGGGTTTG GGTTTTCCAAAACCCGCACCCTACCCGACCCATTGCCATCCCTAAGGACAATGTAAATTGGGCTGAAGTAAGTAAGCCCG ATGGACTAGATAAAAGGAGCCTACAGAAAATTGGAATGCATGTTGACATGTTCACTTGTAAACTGCATAGGGCAATAATA ACAGTGACTAAAGTTTCTCCCCCACTGATATCATCGTGCTTAGATTAGACAAAAAGTTGGATAATGGATTGATCACAATG ACCTATGTTCCTTAGACAAACAAGCTACGTAATATTCTAACTAAGAGCTTGACAACAAAGTGGTTTCAATAACTTGCTTA CAGATAAAAGTAGTAAAATGAAACCCTTAGGGTTTGTAAAATGAGAGAAGAAGAAAAAGGGCTTTGTTTCCCTTGTGATG AGAAATATATAAATATCTTAGGGGGATGATTTTGGAGGAACTTCATAGTTATAAGTTTGTTAAAGGTTATTGGTATAGTC AGTTAGAAGTTTGGTACAAGTTGTAAGAGGGTCTGTATGCTATATTAAGCCCTGCAGCTAAGAATAGTGGACTTTGGCCA GTGAATGACGTTGTAGGAGAATCCTTGGACCACTCAAATAATTTTTGCATCAATATCAATATGCACCAACTCTGGGTACA TCACTTAATAATCCTATCTTTCGATAATTAATTTTAAAATTCTCTCATTATTGGTACCAGTTTTATCCCAATATGAGCAT GCAAATTTGTTCAATCAATATATACTTCCAGACAAAACACTGATAGAAATACATATGACAAGTAACTCATCCAGATGATT TTTAGTTTTAATCACCAAAAACATGATATTTGGTTACTATCATTCTTCTTGAGTATCATACTATCATTCAAGCAACAAAG CATAATTAGTTACTAATTTACAGTACAAGACAATATTATAATTATGTTAACCATATCATCAAGTAACTAGTGTCCTTAAA AGGTATTTACATTACACAAACATTTTTACCAAAATAAATTCTTTTTCAGTATTTATCTTTCAAGATTTGAGTCGTACAAA TAATCATACTATGCATTTAAAGAGAATTCCCAAACCTTGACTGATTTATATTCTCCTGTAAATTAACATTTCGTCGTTGT GAAATCCCAATATGTCAAAAAATGTTGGTAATAATGATAATTATAGTAGCTACTTAATTCTTACCTATTTCTTGTGAATC TTTCTGTCTTAGACATCCTCTCCACCAAGCTATACCAAATACCGTGATGATAGCAAATGCTCCAGCAGCTACAGCTAAAA CAATAGACCGCACTGGCATGCGCCGCATACCAGTTCCACTTTCCACTGGGGGTGTAAATTCTGCTTGATCATGATATAAC ATAAGTGATTTTCATATATATTAGGTCAAATGACTATATTGATTATGATGACATGAGAGATAGAACCACAGAAAAGTAGA ACTAACCAGAATCAACAGAAATAGCTGATACAAGAGGACCATAGACTGATCCAAATGGGATAGCAGTTGTCCCTTTCCCA GCCCAATGAAAGCGGATCTCCAAGGTATTATTAGTCACGATGGCAGTGAACTTTTTAATGACTGCCTTACCAACTCCTCC TGCTGCTTCTGCAATATCGAAATCCTTCAGCACCAAGTTTCTCTGCAATTCTTCAATCCAAGACCAAATTATTCATGATT GTAAAAACTGAAAAGGCATTTGTTCAATATCAAACAAGTGGTCGAAAAAAGATAAAATGATGATATCATGCACCTGAATA TAAATGTCAAAACACACGCCTTCCAAGGCTGGAATATGTTTGGTCATCCGTGAACATTATCTCTGCAAAATGGAGATTTA CTGTGTACTTTCCATTTCCCAGGCAAAATCCATAATACATGAGGGAAAGAGGAGAGACACGAGCATCCATATACAGTTCA CCATCATCCATAGCAAGCTTAGTTGAATTAGACCAGGTATAGTAATCCATGAGGCCGCTATCAAAGAAGTGACCAGTGGT GCTAACTGCCCAATTTGATTTAGTCTGGTAAAATGTTGCAGGTCCGGCTTCATGTGAATCATCATCAAACGTCACGCTTC CATTAGAAGTTATCATCTTGCCACCACAATTTATATGGAGAGAGTACAAACCTGAAGTGGAAAGCCAGTACAAGGAAACA AGCCCAATAAGATGATCGCATTAGAAAATTCCATACAAGTATTATTTTTTCATCCTCTTGTATGCAGGAGAGCGAAGATT AGCAGCACCTTCATTCATGAAAGACAACTGGAAATATAATTGGTTACAATATCTACACTCTTTAAGAAGAAGAACAAAAA AACCTTGAGCAAAATTACCATGTACTCCTATATGAAACAGAGTCTTGGAAGTAGATGTTTCTATATAATTTCTCCATGAT TACATATCACGAAAATTCTCGCATCTCATATTACAATAAGGTCAGTACAAAAGTTGTACATTTCACATGATCAAAGTTAA GATAAAACCCCAAGTTAAAATAAAATTGTACATTTCACATAATCACAAAATGCTGATCTATTGTAATTTTTGTTTCAGGC TATTGTAATCCCAAAATGTTTGCGTCACACTGTAAATTTTCCAACATTATGTTCATTTATA
CDS sequence (LotjaGi3g1v0263100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCAAGTGAACACAACTCCGGAAGGAACTTCTAATCCTACACAAGAAAGCATGTATGAACCAAGTCCGGAAGGATC TTCTAATCCTACACCTGAAGGTCTGTCACTAAATGATTCAACTCATGATGGGCAAGATGCTGCAGATTCAACACAACCTC CAACAAAGAAGCCAAAAAGTGAGGTATGGAATGATTTTGATAAGGTTAAAGTGAATGGGGAAGTAAAGGCAGTATGCAAG TGGTGCAAGAAACATCTTAGTGGCAATTCAACGTATGGAACAACTCACTTGCGTGGTCATGCAAATAGGTGTATTCAGAA GTTGATTAAGACGAGAGGCCATAACAAAGGGCAAACATTCATCATGCCTAAAGCCATCCAAGGCAAGCAAGAGATAGGCT TTGGAAATTATGATGCAGAGAAAACAAAGAAGTTGATTGAAAATGCAATTGTCATGCATGATTATCCACTATCAATAGTG GATCATATTGGTTTTAGGAGAATATTAGGTTCTCTCCAACCATTGTTTCTAGTTCCTAGTCGAAACACTATCAAGAAGGA GATTTTGAAAATCTATGATATTGAGAGGCAATGTACTATGAAGATGTTAGACACTCATGAAGGAAGAGTGGCCATTACCA CAGACATGTGGACTGCAAGCAACCAAAAAAAGGGTTACATGGCGGTCACAGTTCACTACATTGATGGCACTTGGACTTTA CAAAGTCGAATTTTGAGGAAATAA
Protein sequence (LotjaGi3g1v0263100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDQVNTTPEGTSNPTQESMYEPSPEGSSNPTPEGLSLNDSTHDGQDAADSTQPPTKKPKSEVWNDFDKVKVNGEVKAVCK WCKKHLSGNSTYGTTHLRGHANRCIQKLIKTRGHNKGQTFIMPKAIQGKQEIGFGNYDAEKTKKLIENAIVMHDYPLSIV DHIGFRRILGSLQPLFLVPSRNTIKKEILKIYDIERQCTMKMLDTHEGRVAITTDMWTASNQKKGYMAVTVHYIDGTWTL QSRILRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 58 | 58 | - | – | |
| MobiDBLite | 1 | 63 | 63 | - | – | |
| PANTHER | 45 | 246 | 202 | 4.8E-57 | – | |
| PANTHER | 45 | 246 | 202 | 4.8E-57 | – | |
| SMART | 57 | 107 | 51 | 4.9E-10 | ||
| ProSiteProfiles | 57 | 121 | 65 | 9.255 | ||
| Pfam | 60 | 101 | 42 | 4.4E-5 | ||
| SUPERFAMILY | 60 | 108 | 49 | 1.43E-6 | ||
| SUPERFAMILY | 140 | 197 | 58 | 3.14E-5 | ||
| SUPERFAMILY | 201 | 246 | 46 | 1.14E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi3g1v0263100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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