Domain Predictions — View

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SSF140996

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 24

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0080219.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Oligoribonuclease [Medicago truncatula] gi\|357493709\|ref\|XP_003617143.1\|	Domains IPR003656 PF02892 PS50808 PTHR23272 SM00614 SSF140996 SSF57667	7
Lj0g3v0105489.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains IPR003656 PF02892 PS50808 PTHR23272 SM00614 SSF140996 SSF57667	7
Lj0g3v0281349.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HAT family dimerisation domain containing protein [Oryza sativa Japonica Group] gi\|110289306\|gb\|AAP54387.2\|	Domains IPR008906 IPR012337 IPR025525 PF05699 PF14372 PTHR23272 PTHR23272:SF12 SSF140996 SSF53098	9
Lj0g3v0281349.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HAT family dimerisation domain containing protein [Oryza sativa Japonica Group] gi\|110289306\|gb\|AAP54387.2\|	Domains IPR008906 IPR012337 IPR025525 PF05699 PF14372 PTHR23272 PTHR23272:SF12 SSF140996 SSF53098	9
Lj0g3v0330619.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HAT family dimerization domain containing protein [Medicago truncatula] gi\|357444855\|ref\|XP_003592705.1\|	Domains IPR012337 PTHR23272 PTHR23272:SF0 SSF140996 SSF53098	5
Lj0g3v0346449.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Os10g0170600 [Oryza sativa Japonica Group] gi\|297610165\|ref\|NP_001064234.2\|	Domains IPR012337 PTHR23272 PTHR23272:SF12 SSF140996 SSF53098	5
Lj3g3v1309430.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Oligoribonuclease [Medicago truncatula] gi\|357493709\|ref\|XP_003617143.1\|	Domains IPR003656 IPR012337 PTHR23272 PTHR23272:SF0 SM00614 SSF140996 SSF53098 SSF57667	8
Lj3g3v2517860.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Os11g0613900 [Oryza sativa Japonica Group] gi\|297612178\|ref\|NP_001068267.2\|	Domains IPR003656 PF02892 PS50808 PTHR23272 SM00614 SSF140996 SSF57667	7
Lj5g3v0875890.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Oligoribonuclease [Medicago truncatula] gi\|357493709\|ref\|XP_003617143.1\|	Domains IPR012337 PTHR23272 PTHR23272:SF0 SSF140996 SSF53098	5
Lj6g3v1371890.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Oligoribonuclease [Medicago truncatula] gi\|357493709\|ref\|XP_003617143.1\|	Domains IPR003656 PF02892 PS50808 PTHR23272 SM00614 SSF140996 SSF57667 mobidb-lite	8
LotjaGi1g1v0297300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BED zinc finger,hAT family dimerization domain; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp\|P08770\|TRA1_MAIZE Putative AC transposase; TrEMBL-Plants: tr\|A0A151R6M7\|A0A151R6M7_CAJCA Putative AC transposase; Found in the gene: LotjaGi1g1v0297300_LC	Domains IPR003656 IPR036236 IPR037220 PF02892 PS50808 PTHR23272 PTHR23272:SF112 SM00614 SSF140996 SSF57667 mobidb-lite	11
LotjaGi1g1v0297300_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BED zinc finger,hAT family dimerization domain; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp\|P08770\|TRA1_MAIZE Putative AC transposase; TrEMBL-Plants: tr\|A0A151R6M7\|A0A151R6M7_CAJCA Putative AC transposase; Found in the gene: LotjaGi1g1v0297300_LC	Domains IPR003656 IPR036236 IPR037220 PF02892 PS50808 PTHR23272 PTHR23272:SF112 SM00614 SSF140996 SSF57667 mobidb-lite	11
LotjaGi1g1v0511400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BED zinc finger and hAT dimerization domain-containing protein; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp\|Q6AVI0\|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2; TrEMBL-Plants: tr\|A0A151R6M7\|A0A151R6M7_CAJCA Putative AC transposase; Found in the gene: LotjaGi1g1v0511400	Domains IPR003656 IPR008906 IPR012337 IPR025525 IPR036236 IPR037220 PF02892 PF05699 PF14372 PS50808 PTHR23272 PTHR23272:SF112 SM00614 SSF140996 SSF53098 SSF57667 mobidb-lite	17
LotjaGi2g1v0215100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BED zinc finger,hAT family dimerization domain; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp\|P08770\|TRA1_MAIZE Putative AC transposase; TrEMBL-Plants: tr\|A0A151RXE3\|A0A151RXE3_CAJCA Putative AC transposase; Found in the gene: LotjaGi2g1v0215100	Domains IPR003656 IPR008906 IPR012337 IPR025525 IPR036236 IPR037220 PF02892 PF05699 PF14372 PS50808 PTHR23272 PTHR23272:SF128 SM00614 SSF140996 SSF53098 SSF57667 mobidb-lite	17
LotjaGi2g1v0260000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BED zinc finger,hAT family dimerization domain, putative; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp\|Q9M2N5\|DSLE_ARATH Zinc finger BED domain-containing protein DAYSLEEPER; TrEMBL-Plants: tr\|A0A151RFC5\|A0A151RFC5_CAJCA Putative AC transposase; Found in the gene: LotjaGi2g1v0260000	Domains Coil IPR008906 IPR012337 IPR025525 IPR037220 PF05699 PF14372 PTHR23272 SSF140996 SSF53098 mobidb-lite	11
LotjaGi3g1v0182200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BED zinc finger,hAT family dimerization domain; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp\|P08770\|TRA1_MAIZE Putative AC transposase; TrEMBL-Plants: tr\|A0A151RXE3\|A0A151RXE3_CAJCA Putative AC transposase; Found in the gene: LotjaGi3g1v0182200	Domains IPR003656 IPR008906 IPR012337 IPR025525 IPR036236 IPR037220 PF02892 PF05699 PF14372 PS50808 PTHR23272 PTHR23272:SF128 SM00614 SSF140996 SSF53098 SSF57667 mobidb-lite	17
LotjaGi3g1v0182200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BED zinc finger,hAT family dimerization domain; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp\|P08770\|TRA1_MAIZE Putative AC transposase; TrEMBL-Plants: tr\|A0A151RXE3\|A0A151RXE3_CAJCA Putative AC transposase; Found in the gene: LotjaGi3g1v0182200	Domains IPR003656 IPR008906 IPR012337 IPR025525 IPR036236 IPR037220 PF02892 PF05699 PF14372 PS50808 PTHR23272 PTHR23272:SF128 SM00614 SSF140996 SSF53098 SSF57667 mobidb-lite	17
LotjaGi3g1v0263100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BED zinc finger,hAT family dimerization domain; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp\|Q6AVI0\|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2; TrEMBL-Plants: tr\|A0A151RXE3\|A0A151RXE3_CAJCA Putative AC transposase; Found in the gene: LotjaGi3g1v0263100	Domains IPR003656 IPR012337 IPR036236 IPR037220 PF02892 PS50808 PTHR23272 PTHR23272:SF113 SM00614 SSF140996 SSF53098 SSF57667 mobidb-lite	13
LotjaGi3g1v0263100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BED zinc finger,hAT family dimerization domain; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp\|Q6AVI0\|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2; TrEMBL-Plants: tr\|A0A151RXE3\|A0A151RXE3_CAJCA Putative AC transposase; Found in the gene: LotjaGi3g1v0263100	Domains IPR003656 IPR012337 IPR036236 IPR037220 PF02892 PS50808 PTHR23272 PTHR23272:SF113 SM00614 SSF140996 SSF53098 SSF57667 mobidb-lite	13
LotjaGi3g1v0263100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BED zinc finger,hAT family dimerization domain; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp\|Q6AVI0\|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2; TrEMBL-Plants: tr\|A0A151RXE3\|A0A151RXE3_CAJCA Putative AC transposase; Found in the gene: LotjaGi3g1v0263100	Domains IPR003656 IPR012337 IPR036236 IPR037220 PF02892 PS50808 PTHR23272 PTHR23272:SF113 SM00614 SSF140996 SSF53098 SSF57667 mobidb-lite	13
LotjaGi3g1v0354000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BED zinc finger,hAT family dimerization domain, putative; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp\|P08770\|TRA1_MAIZE Putative AC transposase; TrEMBL-Plants: tr\|A0A151R6M7\|A0A151R6M7_CAJCA Putative AC transposase; Found in the gene: LotjaGi3g1v0354000_LC	Domains IPR003656 IPR012337 IPR036236 IPR037220 PF02892 PS50808 PTHR23272 PTHR23272:SF112 SM00614 SSF140996 SSF53098 SSF57667 mobidb-lite	13
LotjaGi5g1v0096500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BED zinc finger,hAT family dimerization domain, putative; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp\|Q6AVI0\|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2; TrEMBL-Plants: tr\|A0A0R0FPF7\|A0A0R0FPF7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0096500_LC	Domains IPR012337 IPR025525 IPR037220 PF14372 PTHR23272 PTHR23272:SF112 SSF140996 SSF53098	8
LotjaGi5g1v0096500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BED zinc finger,hAT family dimerization domain, putative; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp\|P08770\|TRA1_MAIZE Putative AC transposase; TrEMBL-Plants: tr\|A0A0R0FPF7\|A0A0R0FPF7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0096500_LC	Domains IPR012337 IPR025525 IPR037220 PF14372 PTHR23272 PTHR23272:SF112 SSF140996 SSF53098	8
LotjaGi5g1v0286000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BED zinc finger,hAT family dimerization domain; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp\|P08770\|TRA1_MAIZE Putative AC transposase; TrEMBL-Plants: tr\|A0A151R6M7\|A0A151R6M7_CAJCA Putative AC transposase; Found in the gene: LotjaGi5g1v0286000	Domains CYTOPLASMIC_DOMAIN IPR003656 IPR008906 IPR012337 IPR025525 IPR036236 IPR037220 NON_CYTOPLASMIC_DOMAIN PF02892 PF05699 PF14372 PS50808 PTHR23272 PTHR23272:SF112 SM00614 SSF140996 SSF53098 SSF57667 TMhelix TRANSMEMBRANE mobidb-lite	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	4.17