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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0269400 |
| Transcript ID | LotjaGi3g1v0269400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hydrolase family protein/HAD-superfamily protein; TAIR: AT3G45740.1 hydrolase family protein / HAD-superfamily protein; Swiss-Prot: sp|O13899|YF38_SCHPO Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein C22A12.08c; TrEMBL-Plants: tr|A0A151SV01|A0A151SV01_CAJCA Uncharacterized protein YKR070W family; Found in the gene: LotjaGi3g1v0269400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:51883655..51890314) extracted from Lotus japonicus Gifu genome v1.2.
ATTGGTTAGAGGGAACTTGGAAGTGAGCAACAAACTTTTCGTTTGCGGTATCGTGTGCTCCTCTACTGAAACGATGAGCT TCCATCTCTTCACCAAAGCTTGCCGGCAAAGCCAAGCGAGAAACCGAACCGCGTTTTCCTCTCTTGTTTCACGCTCTTTC TCTCAGCGATCTGAACCACGGTCCGTGATTCCTCAAACCTCTCATCATTCTCTCTTTTGTGGCTTTTCCGTTTCGTTAAT TTGTGTTTTCGAATTCCCAGGCCTTCATTCGGCATTGCGTTCGACATTGACGGTGTCATTCTGCTCGGAAACTCCCCCGT TGGTGGCTCTCCGGGAGCCCTCAGAAGATTATACGACGCCGACGGTAAACAAGAAATTTCAACAAAATTAAAGAAACTCT CTAAATTAATTTCTGCTATTTTTTATTGACCATTATCGGCTCATGAATTTATTGATCTGTTTGTGTTGTCAGGTAGACTG AAAATCCCTTTCGTTTTCCTCACAAATGGTGAGTTCTGAGTTCTTTCTTCCTCTAATCTTACTTTTTCTGTTTTGAAATT GTCTCGTTCTGTGTATTTAGGTTCAGATCAATACTTGAAATTTCCTTGCTGCACGAGTGTGGTTCAATTAATGGCTCTTC TGGCAACTATATTATTTTGAAATTAAACGCTACTTGCTTTAGTCAGTTTAGTGCATGTTTGTTTCGGCCTTAGAGCCTAG ACAAATGTGATTTCACGTATCTCATGGCAGTACAGAGAAGCTAGAGTGTGACATTTGAGTTTAATATGGATCGGAGAAGC ATGATTATGACACGTGAGTTCAACGAAATTCAAACTAGCACTTAATTTTAATGTTAATTTTATCTTTCACGCAGGTGGTG GCTTTCCTGAAGCTACAAGAGCATCTGAGCTGAGTCAACTTTTGGGTTTAGACGTCTTACCTTCACAGGTGTGTTGGAAA TATCTTGCTATGTTATGAAGAAGAAGATGCATTTAATATCTTATGAACATGAAAATAAATCCAACATTCATTTAGAAATT AAGAGGATTTAGAGTTATTCATTTTGGAAAGATTCATTAATCGTAATCATAATATATACACATGAGGCTTAATTTTCTGG TCTATTCGCCGCATACATGTCTCTGTCCAAAGTCACACTAAAAGACTGCCTTGTCACTTTGGTTCCCTAATTTCTGTTTT GAAATTGCAAAGCGTCATTAACTGAAGTTATCATATTATGCAGGTTTTACAGGGCCATTCACCATTTAAACAATTGGTCA ATAGGTATGAATATGCTTCTTATTTGATAATGGTTCCATGTGAATATTACATGCTGAAATCAATAAGGTTAACATGCGCT GCAGGATCTTCAGGCATATTTGTTGCATAATATTTATCTGACAGAATTTCAGTTTTCAGATTTGAGAATAAACTCATTGT TGCTGTAGGAAAAGGGGAACCTGCTGCTGTGATGTCTGAATATGGTTTTAAGTAAGGTTTTAAGATATTTGGCTTGTCTG ATGTCTCACGGTTGTATTGAATAATCAATCCAACATCATATCCTCCGTCTTATTATTTTGCTTTTGCTGGTTTTTATCTT CAGAAATGTTCTTTCAATGGATGAATATGCATCATGCTTTGAAAACATTGATCCATTGGCAACCTACAAGAAATGGACGA CCAAGCTGGCTACTACTCATGAGTGTGCGTCAAGGAATGATGTCTTATCTGAAAGGGTTCGAGCAGCATTCATAGTCAGC GATCCTGTTGATTGGAGCAGGGACATACAGGTTACAAAGATTCTATAACTAATTTGTATGAATCAAGATTATAAATAGCA ATTAGCAAATGATATAATTAAACAGTTTTTACCATAAACATCAAATATTCAATGGGAAGTTTAATTGTTGTGCAGCCATT CTTTCTCACAAAGCAGCGTTATGTGTATGTGAAATGAAACAAACAAGTATATTATCAGTGGTTTTGGTCTCCCCCATATG GGAAACCGAACTGCTGAGGTTTTTTTTTTGTTAGTTTAGGGCACAATGCCATCCACTTTGGTGGATGTTCAGGAGAGAAA AATCAAGCTGTGTTAGACTACTTCTATGGTCAGGTTTTAGTTTATTAGATCTAATGCATGTGCACATGGCTATTCCCTGT GAGAGTAATTGAGTGTTTGTGCTATTCATTGGCCATGAATTTTGTCTGCATTTCATAGCTAGAACTAGAAATGAAATGAA ATAAAAAGTAGAAAACAGAAAAAAGAAACATAAGAAACGGAAATGCTACAATAGATACTCTACAAGGATCCAAATTGTAG GTGAGAAACATACAACTAAGTTTGACGCTTTCAAGCTGCTGTCATCTTTTTCAGTTTAGATTAATCATATTTGAAAATTT GAATGATAACATGGTGTTGACAATTATTCAATTAGTTCAATGATGACTGCAAGTATCATCCCATAGGGATTTGAAATCCA AGTACCAGTTCACAAATAGAGTATCTTTTTTTGGTAACATAGGAAGATATACAAGGAGAGTATCTAATTGAATGAATTTC AAATTGAGATTTAAAATGTGAACACAAATTTAGGGCCTGTTTGGTTTACCCATTTTCTGTTTCCATTTTCAGAGAAAACA GAAAATAGATGTGAAAATGTGTTTGGTTAAAATTTTGAAAATATTTTCTTTGAAAACATTTTCGAAAATGGGTTAAATTT TGAAAATAAAAAAAAGTCGTTTTCACATTTTCAATGAAAACGGAAACGGGAATGATGAAAACACGCGGTGGCATACTTGT AATTATAATCACATTGATTTTTTTTTTCTTTTCGTTCTGAAAGAAGTGCATCTGTTGGTGCCAACCCTAACATCTCAGTT CTGCGTTATTCTCTGCTACCTGCTTCATCTCACAGCCAAGATTCTTCCTTCTTCCCTCTTCAAATTTCGATTACCTGGTT TCACTGGGAACCTATTTATGCCTTTTTTAGGTCCGATCTGCTATGAACCTTTGGTTCCTCTATTTTTGGGTGCTTTACTT GATGGGTTTTGGTTGATTTTGGAGCTTCTTTTTTTGTTTGGTGTTCCAATCCTTGTTTAAAGGAACTCTGTTGTTCTCCT CTACTTATATGGCTTGCTATTTTTTTTGTGTTGCATAGTTTTTTCCATTTCAAATTTTGGCGGAACAAGAACTATGAACG CTGATCTGTTTGTATTTATTTGAGTTTCTGTCTTCAATTGTTAGAAATTTGAGCAAATTGACATTAAAAAAAAGAAAACA TGAAACATTTTACTTTGGCTTTGGAAAGCTTATGTACGGTCACACATGGATGCTCAAGATATCTAGGAATTCTTGCATCT GGGTTGGCTTTCCAATGACAGGTGCTGGTTCTCTTTGTGATGAAGGGCTTCGCTGCTCTATTCTTCAAGCATCTAGGATT GCTATTTAATTGGGTTCAATTCCTCACTGCTACCTCCATTAACCTTTCCCGTCAATTTGGTGGGACTTTTGATTTTGGCT CATAAAAAAAATGTTGCATGGTCTTATCAATAAACTGAATGCTATGGCATCCATATACATGCTTGTCTCTTGTGCTTCTT TAAATTGTGCTTTGCAGGGTCTGAGTTGTATTGGCTGGGAATATGGCCTAGTTTTGACAGCTTTGGTTTTTTACTCTAGT CCTTACGAAAATAAGACAGGAGGTGCAGATGATTGTTTCTCTGCTTGATTTTTTTTCTTCTGTTTTTCTCTTCTTGTACT AAGTTAGGATACCTCTTGATTCCCATTATTATGGATGCACAAGGCTTAGAGTAGATCAGCAAGGTGCCAATGTTGATGTT AATCAAGGTGCCAAACTTATGCAGATCAAATGTGGGAAAATTACCATAAATCTTAAGAAGAATTGTATAATTTTTATTTT TAAGACCAATAATACTTATTATATTCCTCTTACTTGCAACGTGTTGTGACAATTGTATTTAACACTTGAATAATAGTTTT TTGTTATAATAGTAATATAAAACACATATACCAATTTTTATATTTGAAAATATAATTAGTATTAGATATAAAATATATTA TAAATTATGACAAACATTGGTGAGTGTATTTTCCTCAATTATTTCAAAAATTGAAAACAGTTGAATCAAACACATTTCCA TTATTTTCAGTTTGAGAAAATGGAAAATATGAAGTTAAACCAAACACGTTTTCTAAATGTTAAAAAATTGAAAATGAAAA CCGGAAATGAAAATAGAAAATGTTTTCTCAAACCAAACAGGCCCTTAAAGTGCAGAGTCTAAAATGACACTGAATGAATT TATCCCTGGATGTTCTAAGTACCACCATTGGATGTTCCAGCCAACAAGCACCAGCAGTGATCTCATTTTCTATTTATCTT TGGCTCCCCTGGTCCCTTAAGATAATTCCTACATTAAAACATTATAAACTGACCAATGGAATAAGTGGTCTAACACCACA ATCACATATCCTAGTTTCTGGACACATCTTGGCATAACTATCAAAAAAATACTACAAACTAACTATATCAATCAACTTCA AACGTGGATTTATCACATGGATTGTATTTCTAAGAAGCCAAAACAAATAAAAAAACAGTATTTGCTAGAAGTTCTTAGAT TTTTGTTTTTGTTTTATGCATGGAATTGATGGATCTGGGGACTAACCAAGACTTTTCATTCAGGTTCTCTGTGACATCTT AAAATCAGGAGGCCTTCCTGGAAGAAACATTGGACAGCAGCCACATTTATATTTTGCAAATGATGACCTTGAGTACCAGG TTGGTTGATGTTTGCTACTGAAAAGTCTTATACAGAAGAAGACATTATATGGATCCAATTAAAAATACTATACTACTATA CTTACTGACACAAGGTCCCGCGAAAGGTAGACTAAATTTCCTTCTGAACGTCTGGGCATGGGAGCTTTCAGGATTGCACT AGAATCTATCTTCAATAGGTACGACTGCCTATTATCTAACTGTTAATGGCAGCTCTATACTTTAGCTCCTTTAACTGGAT TGCACTAGAATCTATCTTCAATATATACATATACATACAAGTTACATAAGAAACCATTTAAGCATATTCATTATTCAAAA CTGCAGCCAAATTAGTGTAGTGGTGTGTGCTGATTTAATTAATATCTAGACTTTCAAGAATCTTCGACTATATCCTGAAA CACTCTATATGCAGGATTTCCCCTCATTCCCTGGAGTACACATGTTTTGGAAAACCTCATCCATCTGTATTCAAGAATGC AGAAAATGTGTTACAACAATTCGTGCCATGTGTTGATCTCAATGATTTTAATAATAAAAATGCTCAATATTTTCAAACAC TTTATATGATTGGAGATAATCCTGCAGTTGACATTAGAGGTGCACAGCAGGTTTGTCTCTTGCAGCTAGATTCACTAGTA TCATAGGTAAATTTATTTGGTGACAAATGCCATTAATGAAAACATCACATTTCAGACTGGGCATCCTTGGTTTTCTATTC TCACAAGAACTGGAGTTTTCAAAGGGAAGGAAAATCATGACAAATTTCCAGCAGATCTGGTAATCTCTTTCAAGTTCCTC TAGAAAAATCTCATACACAAAATGCATTTTTCCCCACTTTGTTATTTTAATTTCGTTGGAAGGTAGCCGTCATAGATAGT TGGAGATGTAAGAATAAAGGTATAGAAATGCTTTTCTTTTTCTTGTGGGTTTGTGAGTAATCTGAGTTGGACATATAGTA TAGAATCAGGATAAACAAAAAAAATGTTTTATCAGGATAGTCTAGTAATTATGGATAGAGTAAGTCTAAGGAATATTATT TGTATACTTGATATCTGATCAATTCATCTAGCCGGTTCAATATAGTGGAAAAAGACAGTTGTGTTAGTTGTCATGTTTGA ATTTTTTACCTAATGAAAAAAAGGATGGAGGACTCGGTGATATTGACACAGATAATGCCACCATAGGATTGAATTATACA AAGCATAATTTTGCCTGAAATGTGTGTGAACTATGAAGTAGTAATCAAGACAACACCACACCATAACAGCCTTGTGTTTA TTTTGCATTTTGCAACTGAAATTGCTACTCTCAAGTAAAATAACTTGGGGGTGGGATTACAATACAACTTCGCATTTGCC ATCGCAGGTTGTTGATACTGTAGAAGAAGCTGTGGACTTCATCTTGACAAGGGAATCCGCTTCATAAATCCCATCAGCTT TACATGGCGAAGGCTCTGATTTTTTAAGGAGGAAGATTCTTAAAAGATGATATTTGAGTGATCAATAAAGAATGGAATAA TTTAAGGCTTATTCCTGCCATTCATTTGATGACAAGTTGCACTATGAAACATTGGATTAAATTGGTTTTTATTCATTCTA CCCTTGTTTACCCATGTTTGCTTGCTTTTCTGATAGATCAAGAGCTTTTAGTTAGTTGCTTCAGTTTAACTACACTTTCT TGTGCTTGTAAGTTCATTTGGGTGGGCCTTTCAAAAATAAAATTCATTTGGGTGGGAGTTTCGCTATTAAATTCCTCAGC CTTGGGCTGAATTGAAGTATGAATCAATGACTTTAAAAAAAAAGTATTAATGAAATGGTACCAAATCATGAAACTTTATA AAGTTCTAAATAAGTAAATT
CDS sequence (LotjaGi3g1v0269400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCTTCCATCTCTTCACCAAAGCTTGCCGGCAAAGCCAAGCGAGAAACCGAACCGCGTTTTCCTCTCTTGTTTCACG CTCTTTCTCTCAGCGATCTGAACCACGGCCTTCATTCGGCATTGCGTTCGACATTGACGGTGTCATTCTGCTCGGAAACT CCCCCGTTGGTGGCTCTCCGGGAGCCCTCAGAAGATTATACGACGCCGACGGTAGACTGAAAATCCCTTTCGTTTTCCTC ACAAATGGTGGTGGCTTTCCTGAAGCTACAAGAGCATCTGAGCTGAGTCAACTTTTGGGTTTAGACGTCTTACCTTCACA GGTTTTACAGGGCCATTCACCATTTAAACAATTGGTCAATAGATTTGAGAATAAACTCATTGTTGCTGTAGGAAAAGGGG AACCTGCTGCTGTGATGTCTGAATATGGTTTTAAAAATGTTCTTTCAATGGATGAATATGCATCATGCTTTGAAAACATT GATCCATTGGCAACCTACAAGAAATGGACGACCAAGCTGGCTACTACTCATGAGTGTGCGTCAAGGAATGATGTCTTATC TGAAAGGGTTCGAGCAGCATTCATAGTCAGCGATCCTGTTGATTGGAGCAGGGACATACAGGTTCTCTGTGACATCTTAA AATCAGGAGGCCTTCCTGGAAGAAACATTGGACAGCAGCCACATTTATATTTTGCAAATGATGACCTTGAGTACCAGACT AAATTTCCTTCTGAACGTCTGGGCATGGGAGCTTTCAGGATTGCACTAGAATCTATCTTCAATAGGATTTCCCCTCATTC CCTGGAGTACACATGTTTTGGAAAACCTCATCCATCTGTATTCAAGAATGCAGAAAATGTGTTACAACAATTCGTGCCAT GTGTTGATCTCAATGATTTTAATAATAAAAATGCTCAATATTTTCAAACACTTTATATGATTGGAGATAATCCTGCAGTT GACATTAGAGGTGCACAGCAGACTGGGCATCCTTGGTTTTCTATTCTCACAAGAACTGGAGTTTTCAAAGGGAAGGAAAA TCATGACAAATTTCCAGCAGATCTGGTTGTTGATACTGTAGAAGAAGCTGTGGACTTCATCTTGACAAGGGAATCCGCTT CATAA
Protein sequence (LotjaGi3g1v0269400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSFHLFTKACRQSQARNRTAFSSLVSRSFSQRSEPRPSFGIAFDIDGVILLGNSPVGGSPGALRRLYDADGRLKIPFVFL TNGGGFPEATRASELSQLLGLDVLPSQVLQGHSPFKQLVNRFENKLIVAVGKGEPAAVMSEYGFKNVLSMDEYASCFENI DPLATYKKWTTKLATTHECASRNDVLSERVRAAFIVSDPVDWSRDIQVLCDILKSGGLPGRNIGQQPHLYFANDDLEYQT KFPSERLGMGAFRIALESIFNRISPHSLEYTCFGKPHPSVFKNAENVLQQFVPCVDLNDFNNKNAQYFQTLYMIGDNPAV DIRGAQQTGHPWFSILTRTGVFKGKENHDKFPADLVVDTVEEAVDFILTRESAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 372 | 367 | 1.3E-197 | – | |
| PANTHER | 6 | 372 | 367 | 1.3E-197 | – | |
| TIGRFAM | 39 | 368 | 330 | 3.2E-130 | ||
| Pfam | 41 | 145 | 105 | 1.7E-17 | ||
| TIGRFAM | 41 | 340 | 300 | 5.5E-68 | ||
| Gene3D | 41 | 364 | 324 | 1.9E-97 | ||
| SUPERFAMILY | 41 | 364 | 324 | 3.28E-29 | ||
| Gene3D | 111 | 273 | 163 | 1.9E-97 | ||
| Pfam | 273 | 363 | 91 | 3.0E-15 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0269400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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