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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0309800 |
| Transcript ID | LotjaGi3g1v0309800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein ZINC INDUCED FACILITATOR-LIKE 1; TAIR: AT5G13750.1 zinc induced facilitator-like 1; Swiss-Prot: sp|Q94BZ1|ZIFL1_ARATH Protein ZINC INDUCED FACILITATOR-LIKE 1; TrEMBL-Plants: tr|I3SEY1|I3SEY1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0309800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:65679611..65684854) extracted from Lotus japonicus Gifu genome v1.2.
GTTATGTCATATGTGTAATATAGTATTCACTAGGAAATTTTATAGTATCTTTTCTTGGTTGAAGTATAGGAAATGGGAAC ATGACACTTCGATTTCATTCTCATACACAAGTGCAGCTCCAACAGTCTCTCCTGCAGCTGTATGTTTGTTTGCTCAACCT TTGACTTTTTCTTTCTTAATTTGGGCTTCAATAAGAAAAATTGCCAAAAGCACTGCCTTTAACATCTCTTTCTGATTATT CATTTTCATTTTTTATGCTGCATGTGAAGTATTATAGATAAGAGGGACACTTGTTAAACAAGAACTGGAGTTCTCTCACA AACATGGAGAATGAGATTATGAAAGAGCCATTGTTGGAGAAGACATACTACAAGGACTGTCCAGGTTGTAAGGTGGATCA AGCAAAAGAGCTGAACAGGGGTGTATCAGTTCTAAATCTTTTTATTATATGGATGGTTGTCTTATGTGCAGGTAAGCATT GAACTCTAATTTTACTTCTGGACAATTTGAATGCTGTAGTGAATATTAGTGTTTTATATCTTGAATGTCTGAAATTGTGT GTAGGCAAATTTAAGTTAAATGTTTTTATGGGAGTTTTAATCTGATATTTTGAAGGAAAAATCAAATGTTGTAATTCAAT GTAATAACTAGTTATGAATTCTCATGTCTCTTCCTCTGCCAGTTGAAACTAGTTTACCCTTCTCTGATGTCTCTTAATTT TATCCTGTCCAGCACTACCTATATCATCTCTCTATCCATTCCTTTATTTCATGGTGAGTCTAACTATCTACTATAGCTTA CAATACACCTTCCATATGATGTACACTCTGATTGTGATATTGTTATTTCTTGGAAGTTGCCTGAACACTGGAGGAGAATT TATTTATTTTGAGTATTTCAAGTTCAAGTTCAATTTCAGTTTTTATTTTATTTTAGATTTTTCATTAAAGATGAATTGGA AGTTTTTGCCAAATCCTTTCGATGGGGACATATACTAGTATATCGTATTAATCATCAAATATATTCACGTTGATCTTTTT CTCATGTTTTTTTGTATTTCAAAAAATGAATCTGTATTAAGGGCAATTAAGGCCTGCTTCCACCTGATTACTGCTACCAA GAACAGTATAGAGTTCTCTACATTTAAAAAGCCATTACTCTCTGAAAATTAGAAGAAGATTATCTTCAATATATGAAGTA CCTTCACTGTTTTCCTCATTATAACATGTCATGTTCCCTCTCAACAGCACTTATGAAGTGTGATTGATATTTGCAAACTC TTGGTTGTACCAATGTTAACTTCAAATTGCTTATTGCTTTTCTCCCCTTCTACTTTTTCATTTGTTATGAAGTACTCAAA AGATCAATAACTATACACCGATGAATGTAATGTACAACATCCTCAATTACGCAACATTTATTTTCAGGTAAGGGATTTCG ATGTTGCAAAATCGGAGGCGGATATTAGTTCTTATGCTGGTTATGTGGGTAAGATTAGCTTTTGTATTTCCATTCTTTGA AGACTTATATCCTTGTTATGAGTTCTTTATTATTGATGCCTGTATGATCAAAAAATGATGTAGGATCTACATTGATGCTC GGCAGAGCTTTGACATCTGTAAGCTGGGGAATGGTTTCTGATCGTTATGGTCGAAAACCTATTTTAATTTTAGGGGTCTT GGCCGTGTGAGTATAATATTTTCCAATCTGACAATGAATTGGATGCTTTCTTAAAGTTATATTGTGTAGTTTCCCATAAC TAAAAATGTTTACTTGATTTCAGTGTCATTTTCAACACACTATTCGGCCTAAGTACAAATTTTTGGATGGCTATTATCGC GAGATTTCTTCTGGGATGTTGTAATGGTATACTTGGACCAGTTAAGGTACCCTTCTTTAAAACCTAATAATGTGCAGTTC AATGTTTCATCCACAAGTAACAGGAGTCGGGACACAATTTTTGGATTTACATGTTACACACATGGATACATGACTTTTTC AACGACTCAAACTTATTAGAGTATAGTTAGTTACAGATACTGTAGAGGATAGTTAGTTACGGATTAGATCAATTAGTTAG TATGACTATGAGTCTTCTCTAGGACTCTTGTTTTAACAGATTCTGTTGGTCTATATATAGACCATTCTGTACAGTGTTCT GTCAGTGAAATACACACAAGATCCATTTTCTGTTAGTTTGCTCTCTACTCTAGTAAAACTCATCTACACTTCAATTTATA TATCTATGTGATGAACTCCTTTATTTAACAGGCCTATGCTACTGAACTTTTTCGAGAAGAGCATCAAGCTCTAGCACACT CTAGCATCAAGCTCTAGCATCAAACTCATCTACACCATCAACCCTTGTTGTCTACGGTAACTTCTCAGAACTGTGTTTCC ATCATAATAATTCAGAGTGTGATATGCTTTTAGGTCAGTGGAGCTTGGGCCATAGGACTGATTATTGGCCCAGCATTGGG AGGATATTTGGCTCAGGTACTGTTGTTATTCTTTGCCTTCAGAAGTAGAAATGCATCTTGCGAAAAACCTTGAATTTAGT ATATGCACGTAAGATGGCTTTTTGAAAGATTTCTAGTATATTGAGAAGGCTGATGCCTGACATTTTGTACTTAAGAATTA GAAAGGTTGAATTTCCAAAACCCATTTTGACATATCAAAAATAAATGATCTTCTGCATGGTTCTTACATTTGTGTGATTG TATCTTTGTCTGTGTATAGGTAATGGCACACATTCACGTGCCGATTTGTCATTTGCTCCTCCAGTGCTAAAGGAAATTTC TTATTGCAGCCAGTAGAAAAATACCCACACATATTTCCAAAGGACTCCTTTTGGGATCAGTAAGTGGACTTGTCCTAGTG TGTAATTTAATAAAACCTATTGATTCGATTTTGGCTCCCATGTTTGTCTTTCTATCAGTTTATCATTTAAATAATATGTG AATTTCATTTGTCAAAACACAAATCATTCTTCAGGTTTCCATACTTCTTGCCCTGCTTTATAATATCAGGACTGGCATTT TCAGTTCTTATTGCCTGTATCTGGATTCCGGTATGTAACTCAGGTTCTAACATATATGCTCATTAGCTACGTATGTTTCT ATCTTCTGTTTTGTGGATTTTACTTTGAACACTTTTATGACGATATTTTTGTTTATCCATTTTTGGGTGATTTTGTCAGC TTTACCTTGCTTTTGTCTTCATTGTTTGCATGGTCTTATGTCTAACTGTCTCCTTCGTCGGTAAAATTGTTTAAAATACC TGAAGGAAACACTTCACAATCACAAAGGTAGCAATGAGTCCACAGATGATGCTGGAGCTTTAGAAAGTGGAAGCGGCAGA GTTGACAAAGAGAAGACAATCCAAAAGAATGAAAACCTCTTCAAGAATTGGCCCTTAATGTCATCTATCATTGTTTATTG TATTTTCTCCGTTCATGACATGGCTTATCAAGAGGTATCTTTTCTATCTAATGAGGTTAAAAATGGTATATGCAACTCAT TTAATACATGCAGTTTGGATTCTCCTGCTTGTTTTATCCATATATCAATGCATCTATGGTAAAAAATCTGTTCATCCTGT TTTCTTTAGATTTTCTCTTTATGGGCTGTCAGTCCTCCAAGGCTGGGGGGTTTGAACTTCACAACTGATGATGTTGGTAA TATTCTTGCAATAACAGGTGCATCTCTGAAACCTATAACAATGGTTTATCACTGTTAGGCATGTGTCCTTATTAAACTTC CATCCATAAAGAGTACACATAAATTGTATGCATATACATAGGGCCAGATGGTAACTTGATGCAAGGGTTTTTGTTAGGGT TCTAAATTATAATCAGTAGGCCTGTTTTGTTTGGGCCTAGGTTTGATTTTATTTATCTCTATTAGTTAGTTTTAGTACGG TTCGGTATTGAGTCTGTTTTTATTATTTGAGTTGAGCCTATACTGAGCCAGAGTTGTTTGCTTAGTAAGGTTAGTTTATT ATAAATAGGAGTACTCTCCTTAGGTTAAGTTATGAAGTGAGTAAAAGAGTTTGTAAAGAGATATTCCCTTGGAAGGGTCA CCGTTGGAAAGAAGGTTTTCCTTTTTGTTTGAATCCAATAGGATTGTTTTTGTATCCCTCTATCATTACTCTACTCTTTT CATATTATATTTTCCAGTTCATATAATCAAAAATACAAAAAATATTTCCTATTCCACTTCCTTTATCTTGTCATTGGCTG TTAGGATTCTACAATCCTAATAGTTTTCTTCTTTTTACTGGTCTTGTTTAGTGAATTTCACTGACTTGGATTACTAAATT TTGGTCAACTATTCTTCAGACAAATCTAGATCATGAGTACATGACCACAATATAGTGTTTACATTTAGCATTAATCTTTG TATCCCCATTAGATAATAGATATTTTGTTTACTTGTTTCTCAAATGGTTAGGTCTTTCCCTTGTCATCTACCAAGTTACC CTATACCCATATGTGGAAAGAACTTGTGGGCCTATTGTCATTGCCCGAATTACAGGGGTTAGTTTTTACCTAATTGTGGC AATTATTGCAATTTAGCATGTCATTGCTTGTTATTTGAAATATGTGAAGTTACTGTGGTTCCATATGCAGATGTTATCCA TACCACTTTTGCAAAGTTACCCCTTTATAGCAATGTTGTCAGGCATATCACTATACATAGTGATAAGTGCTGCTTCTATT CTGAAGAACATTCTGGCTGTAAGTGTTCCTCTTTTTATATACTTAATCATTCATGAGTGATAATGGGAGGTTACAATAAA TTGAATTAGACTCCATAAGCTTCTCTTTCCTTAAAATTAATTCTAGCATCTAAAAGCTACTCACAAAAGCTTCTACCTAG AATTGATGTTGGCTTTAAAATCAATTGTAGAATGATTTTCAAACAAGCACTCAACCTCAGAGTCCAACTTAATCAATTCT TTAAAGGTTCTCTATGTTACAAATGTGACCGACTGCATTCTTTTTGTCAGATGACGATCATAACTGGTTTATCTCTTTTG CAAAACAGAGCAGTGGTAAATTTTCAGATAATTTTATTTTCTTCTTTTTCCTCAAGAAGTTTTAAATTAGATTTTGTTAG CTGACCATCATATGACATATTTATTTTGGAAACAGGAACAACACCAAAGGGGGGCAGCTAATGGAATTTCTTTGACTGCT ATGTCTCTATTCAAAGCTATTGGCCCTGCTGCAGGTGGTGCATT
CDS sequence (LotjaGi3g1v0309800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAATGAGATTATGAAAGAGCCATTGTTGGAGAAGACATACTACAAGGACTGTCCAGGTTGTAAGGTGGATCAAGC AAAAGAGCTGAACAGGGGTGTATCAGTTCTAAATCTTTTTATTATATGGATGGTTGTCTTATGTGCAGCACTACCTATAT CATCTCTCTATCCATTCCTTTATTTCATGGTAAGGGATTTCGATGTTGCAAAATCGGAGGCGGATATTAGTTCTTATGCT GGTTATGTGGGATCTACATTGATGCTCGGCAGAGCTTTGACATCTGTAAGCTGGGGAATGGTTTCTGATCGTTATGGTCG AAAACCTATTTTAATTTTAGGGGTCTTGGCCGTTGTCATTTTCAACACACTATTCGGCCTAAGTACAAATTTTTGGATGG CTATTATCGCGAGATTTCTTCTGGGATGTTGTAATGGTATACTTGGACCAGTTAAGGCCTATGCTACTGAACTTTTTCGA GAAGAGCATCAAGCTCTAGCACACTCTAGCATCAAGCTCTAG
Protein sequence (LotjaGi3g1v0309800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENEIMKEPLLEKTYYKDCPGCKVDQAKELNRGVSVLNLFIIWMVVLCAALPISSLYPFLYFMVRDFDVAKSEADISSYA GYVGSTLMLGRALTSVSWGMVSDRYGRKPILILGVLAVVIFNTLFGLSTNFWMAIIARFLLGCCNGILGPVKAYATELFR EEHQALAHSSIKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 171 | 171 | 7.5E-93 | – | |
| Phobius | 1 | 35 | 35 | - | – | |
| PANTHER | 1 | 171 | 171 | 7.5E-93 | – | |
| Phobius | 36 | 59 | 24 | - | – | |
| Gene3D | 37 | 171 | 135 | 4.3E-29 | – | |
| ProSiteProfiles | 38 | 173 | 136 | 17.949 | ||
| SUPERFAMILY | 38 | 168 | 131 | 7.06E-27 | ||
| TMHMM | 39 | 61 | 23 | - | – | |
| CDD | 42 | 167 | 126 | 3.4003E-30 | – | |
| Pfam | 42 | 167 | 126 | 6.3E-18 | ||
| Phobius | 60 | 78 | 19 | - | – | |
| TMHMM | 76 | 98 | 23 | - | – | |
| Phobius | 79 | 98 | 20 | - | – | |
| Phobius | 99 | 109 | 11 | - | – | |
| Phobius | 110 | 135 | 26 | - | – | |
| TMHMM | 110 | 132 | 23 | - | – | |
| Phobius | 136 | 173 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0309800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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