Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0312200 |
| Transcript ID | LotjaGi3g1v0312200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ubiquitin-associated domain-containing family protein; TAIR: AT2G26920.1 Ubiquitin-associated/translation elongation factor EF1B protein; Swiss-Prot: sp|Q9LM84|WOX14_ARATH WUSCHEL-related homeobox 14; TrEMBL-Plants: tr|I1MIK5|I1MIK5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0312200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:66056838..66061048) extracted from Lotus japonicus Gifu genome v1.2.
AACTTCATATCATTAGAATACACAGCAAAATCACAACCAAAAAAGTAAAGGAAAGAAGAAAAAGGAGAAACAAACTAACG CCAATCATCTTCACATGCTCTGTTGTTGTTGTTGTTCATAGGTCAGGTTCTTTAATTCATTTATTCTATTGGGTTGTTCT GTTTTTTTCTGATAATTTTATTTATGTATGATTTCCTCTGTTCTGCTTTGTAGTCTGTGATCTGAATCTTTGTTGGTTTG GAGGTTTAGTTTCATGTGTTGGAGGCAAAGTTTGGATTTTTAGGATATTATCTTGGTGGGTTTGGAACCATTTCTTCTGA AAAATGTTTTTCACTTATGGCATTGATGACTGTTTTAACTGTTTTTTTCTTGAGGGGAAAGTGGAAGATGTGTTGTGTGG ATACCTCAATTTCATAATTGTTAGCTTTTGTAATTTTTGATTCTGTGAAAAGCTTGAAATCATTTTTTTCCTCTCTAATT GATTGATGGCTTCATTTTGGATTTTACAATTTGATCCAAGCTTGTTAAATAGGCGTCTTAATTATGGGGGTGTTCTTCTC ATTAGTTATGAGGCGCCTATCTGTGGATCTGTAGATTAGTTTTGAGTTTTGATTAGAAATTCCGTATATTTTATAGATCT CATGGTGTGAGATTCTCATTCTTTTGATTCTCAAAGGTTCTTCAGTTTTCTTAAATATTCTTGGATAATTTTATTATATC TCAATTATCATGAGTGAATTTAATGTTTTCTTTTCAACCAGAAGTTGTTTGTCCATATATGATGTCCATTCTGATGTTGC ATATCAATTGCATTGCAATTTAGATGAGTCAAATCATAAAATGGAGATTAATTCTAATTTCTAAATTATTTTTTGCAGAT AGCAAGTAATATAATGTCTCCATCAATGAAATCAAAATCCAAGTCCAAGGAGAAGGGCTCTGCAAAGACAAGTAAGGAAC AACATAAGGGAGCATTTCAAACTACAGAAACATCATTGGTTGCTTCTACTGCACAAGTTCATGTAAAAAATCTACACTTC CCAAATACATCTGATACAGATGAGCATTCTAATAGTCCTCAGGGAACAGCCTCTGAGTGTGATTCAGTTTCCAACAACGG CAGCTGCTCTGGTGAATCAGAAGACCCTAAGGAGAAAGCAACAAATTCTGCTACGCGGTTGAATGTTATGCCTGGTTGTG ATAATGACCGAAGGGATAAGATCCGCCTAAAGAATGAGAGAAAGCACCAAAGGCAGAAGGAAAGGAGAGCTCAGGAGTTG CATGATCGATGTGGCGAGTATCTAATGTTGAAGAAGCTAGACGCACTTGCAGAGAAGCTAGTGGCAATGGGATTCTCTTC TGAGAGAGCTACATTGGCTTTAAAGTTAAATGATGGTAAATTAGAGGAATCAATATCATGGCTGTTTGAAGGAGGTGAAG AAGAATCACAAACCAAGAAAACTACAAATCCGGAGGGTAATTTGAAAATTGACATAGGTGAAGAGCTTGTGCAAATTTCT GCTATGGGGGTGAAGTACAATTGTTCAAATCAAGAGGTTGAGAGAGTAGTTGTTGCTTGTGAAGGTGATCTTCAAAAGGC AGAAAATACCTTAAAATCTCAAAAGCTGAAATCACCTGTGACCCAGTCAAAGTCACAGGATTCTGCTGCAGCTTCAGTTT CAATGCAACAGAAAGGGAATGAGTGTGACTTTAACTATTACAAGGTAGGTGGTGCTGAATCTACTTCTCCAGATCCTGGA AGCAGGAATCTGCAGTCTCTCCATTTGAATCATCCAAATGAACTAACAGAGAAAAGATGGGGAGTTACAGGATCAAGCCC TTCTACTATGTTAAATATGGCACAGTCTATGCAAACATTGTCTCCTTCTGTTAAAGTAGAGGCCTTACCTGGTTCCCTTA GGAATGAAGGACGAATGATTCAAGGAGGAGTAAGAAGAGAGGCCTTAGTCATGATGAAGCATCCACAACTCACAAATCCC CAACAAAATTCTCAGATTTCCATCAATTCTTTACCTTTAGGGACATCTGGTTGGTATGTAAATAGTACTCCACTTGTTGA GAATGTAAGGTCCAATGGGAAGTTACTGCACACTCACATGGAGCAACTTTGTCAAGCTCCGTATAAGGGTGGGTTCTATA ATCCAATGGGTGCATCATCACCTTCACCTACAATTTCCTCTCATCATCAGGGCTTATGGAGCAACAATGCATCTTCACTT GAACTAACAGTTCCATCTTCCTTTGGACTTGTTTCTGGTCATCAGAATGCAGCTAGAACATTCAGCTCACTTTCACACAT GGATAGGAGTACTCGGGGCATGATGCCAGAATTTGACTACAACAGCGTAGATTGGAGTTTGGATTGCACATCATCTTCCA AATCAGGTGGATTGTGGCCAGGGACGTCATCATTGTTGAGTAACAGTGATGGAAATAGAATGGGAAGTTCCTACATTACT GGATTGCAAAATGTTGGCATGGCTAGGGATTCTTCATCTTCTGATGGCTTGAGAGAGTGGACCTCTCCTTTTGCTGGGAA GGACATGTTCAGTGTTCCTAGGCAGTTTGTCACCTCTCCTTCTCTGTAGTTGCATATCATGGGAGTTAAAGGGATGTGAC TTATAGCATGTTTGGAGCAGCTTATTTTTTCTAAGAATCAATTATAGTAATATAGTACCCAACAACTACTCACACGAGCT TATCCCAGTATTGATTTTGACTTCATAATCTATTGTAAACATGTTATTATTCTATGTAGTCCTTGGAATGACTTGTCTTG ATAACTGTTTCTGGTTTTTTAGTGAAATCATCTTCTAATTTGTGGTCTATGATTGTTTTTCCACCTAGTCCTCAAACATC TCTTCCCTTCACTTGCATGTGTTTTATTTGAAGCCCTTTTCTGAAGCTCCCATTTACAGGTGGAGGCTAGAACAAATGTG TTTGAGCATGTGACATTACATCACATATCCTGAATCAAGCTATATGCAAGAGGGAACCATGAAATCCGAATTCTTTAGGT GACAACAGTGATCATGAGTGAAAATTGGAATATGAATATATGATGCTGCCCATAAAATCTCTTCATTAATATTTTTCAAA TTAATGAGTTCTTTTAACCTGTCTATTATATGGGTTTACATCTAGATAGGGGCAAAATTATTGTATTGCTTATATGGGTT TACATTTTTATTTTAAAAAATTGAGCTTTTATCCTACTTACAGCTTCAATTTCTTTCATTTTCCACTGAAACAGAGGTCC TTAAATCCATAAGCATGTCAAATATGAACTATTCAGCCCCAGTGCAGTAGCCCAGTCTCTCTCTCTATCTCTCTCTATCT CTCTCTCCAAAGCCTCTTATAAAGATCAGTTAAGGGTGGGGTAACAGGCAAGGTGGAGAGAGAACTTCGCCAAACTGCTC CAAACAGTAGTGAAAAGTACGACTTAAATTAAAAAGAAAATTCAAGGAACTCAGAAAGGCTCATGTATTCACAGTCTCTT TCAAATGACTATACCTCATCAATGCTTTGAATCTATACATTCTTCTACTTCGAACACATCAGTAATAATTTCCCAAACAA TTTGAGAATCTAAGTTCAACAGAGTCCCAAAAGATTCTATACACAAAAACGTTCAATACACTGGTCACCCTTACCTCCAC CACCAGAACTGTTTGAACATGTATATCTTTCTCATCCTAGTATTGTATGTCAGGAAGGCTCTGGCTTTGATAGGATCAGC ATTCAAATACTCAAATGGAGCCTGTAATAGCTCAGCGGCATCAATGGAGCACTTGCTGCGCTCCATTGAATCAGCCAATC GCCGGATGCTTGATGCCACGGTCATCAATGCTTCTTGAAGCTCATCCGAGCTTCGAGGCCGTTTCGGAAGCTGTCTTAGA GGATGGACGACAGGAGCCTCTTGATAACCATTGGGCATCTGCTCATACTCTGGAGGCTCACTGTATGATTCGGTTCCATC TGTCTCACTCGTATTTTCTGAAACGGGAGATGCAAAGGAGGCGGATTCATCGTCACAATTCTTCATATTCACTAAGTGGT TATCATCCTTCACCTTTGCCCAACGACCGGGAGCTTGATAGTTTCCACAAACAATTTTAAGTTGATCATACATCTCTATC TGCTTTCCACAAAATCCTTTAGCATCAGGGTGTGCCTATTCAATGAATTAG
CDS sequence (LotjaGi3g1v0312200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCCATCAATGAAATCAAAATCCAAGTCCAAGGAGAAGGGCTCTGCAAAGACAAGTAAGGAACAACATAAGGGAGC ATTTCAAACTACAGAAACATCATTGGTTGCTTCTACTGCACAAGTTCATGTAAAAAATCTACACTTCCCAAATACATCTG ATACAGATGAGCATTCTAATAGTCCTCAGGGAACAGCCTCTGAGTGTGATTCAGTTTCCAACAACGGCAGCTGCTCTGGT GAATCAGAAGACCCTAAGGAGAAAGCAACAAATTCTGCTACGCGGTTGAATGTTATGCCTGGTTGTGATAATGACCGAAG GGATAAGATCCGCCTAAAGAATGAGAGAAAGCACCAAAGGCAGAAGGAAAGGAGAGCTCAGGAGTTGCATGATCGATGTG GCGAGTATCTAATGTTGAAGAAGCTAGACGCACTTGCAGAGAAGCTAGTGGCAATGGGATTCTCTTCTGAGAGAGCTACA TTGGCTTTAAAGTTAAATGATGGTAAATTAGAGGAATCAATATCATGGCTGTTTGAAGGAGGTGAAGAAGAATCACAAAC CAAGAAAACTACAAATCCGGAGGGTAATTTGAAAATTGACATAGGTGAAGAGCTTGTGCAAATTTCTGCTATGGGGGTGA AGTACAATTGTTCAAATCAAGAGGTTGAGAGAGTAGTTGTTGCTTGTGAAGGTGATCTTCAAAAGGCAGAAAATACCTTA AAATCTCAAAAGCTGAAATCACCTGTGACCCAGTCAAAGTCACAGGATTCTGCTGCAGCTTCAGTTTCAATGCAACAGAA AGGGAATGAGTGTGACTTTAACTATTACAAGGTAGGTGGTGCTGAATCTACTTCTCCAGATCCTGGAAGCAGGAATCTGC AGTCTCTCCATTTGAATCATCCAAATGAACTAACAGAGAAAAGATGGGGAGTTACAGGATCAAGCCCTTCTACTATGTTA AATATGGCACAGTCTATGCAAACATTGTCTCCTTCTGTTAAAGTAGAGGCCTTACCTGGTTCCCTTAGGAATGAAGGACG AATGATTCAAGGAGGAGTAAGAAGAGAGGCCTTAGTCATGATGAAGCATCCACAACTCACAAATCCCCAACAAAATTCTC AGATTTCCATCAATTCTTTACCTTTAGGGACATCTGGTTGGTATGTAAATAGTACTCCACTTGTTGAGAATGTAAGGTCC AATGGGAAGTTACTGCACACTCACATGGAGCAACTTTGTCAAGCTCCGTATAAGGGTGGGTTCTATAATCCAATGGGTGC ATCATCACCTTCACCTACAATTTCCTCTCATCATCAGGGCTTATGGAGCAACAATGCATCTTCACTTGAACTAACAGTTC CATCTTCCTTTGGACTTGTTTCTGGTCATCAGAATGCAGCTAGAACATTCAGCTCACTTTCACACATGGATAGGAGTACT CGGGGCATGATGCCAGAATTTGACTACAACAGCGTAGATTGGAGTTTGGATTGCACATCATCTTCCAAATCAGGTGGATT GTGGCCAGGGACGTCATCATTGTTGAGTAACAGTGATGGAAATAGAATGGGAAGTTCCTACATTACTGGATTGCAAAATG TTGGCATGGCTAGGGATTCTTCATCTTCTGATGGCTTGAGAGAGTGGACCTCTCCTTTTGCTGGGAAGGACATGTTCAGT GTTCCTAGGCAGTTTGTCACCTCTCCTTCTCTGTAG
Protein sequence (LotjaGi3g1v0312200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSPSMKSKSKSKEKGSAKTSKEQHKGAFQTTETSLVASTAQVHVKNLHFPNTSDTDEHSNSPQGTASECDSVSNNGSCSG ESEDPKEKATNSATRLNVMPGCDNDRRDKIRLKNERKHQRQKERRAQELHDRCGEYLMLKKLDALAEKLVAMGFSSERAT LALKLNDGKLEESISWLFEGGEEESQTKKTTNPEGNLKIDIGEELVQISAMGVKYNCSNQEVERVVVACEGDLQKAENTL KSQKLKSPVTQSKSQDSAAASVSMQQKGNECDFNYYKVGGAESTSPDPGSRNLQSLHLNHPNELTEKRWGVTGSSPSTML NMAQSMQTLSPSVKVEALPGSLRNEGRMIQGGVRREALVMMKHPQLTNPQQNSQISINSLPLGTSGWYVNSTPLVENVRS NGKLLHTHMEQLCQAPYKGGFYNPMGASSPSPTISSHHQGLWSNNASSLELTVPSSFGLVSGHQNAARTFSSLSHMDRST RGMMPEFDYNSVDWSLDCTSSSKSGGLWPGTSSLLSNSDGNRMGSSYITGLQNVGMARDSSSSDGLREWTSPFAGKDMFS VPRQFVTSPSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 128 | 128 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 11 | 11 | - | – | |
| PANTHER | 5 | 570 | 566 | 4.4E-218 | – | |
| PANTHER | 5 | 570 | 566 | 4.4E-218 | – | |
| MobiDBLite | 7 | 21 | 15 | - | – | |
| MobiDBLite | 22 | 80 | 59 | - | – | |
| Coils | 112 | 132 | 21 | - | – | |
| Gene3D | 113 | 195 | 83 | 2.6E-8 | – | |
| ProSiteProfiles | 141 | 180 | 40 | 10.619 | ||
| SMART | 142 | 179 | 38 | 6.9E-4 | ||
| SUPERFAMILY | 145 | 185 | 41 | 2.81E-8 | ||
| SMART | 201 | 242 | 42 | 23.0 | ||
| Coils | 219 | 239 | 21 | - | – | |
| MobiDBLite | 242 | 264 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0312200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…