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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0318600 |
| Transcript ID | LotjaGi3g1v0318600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ADP-ribosylation factor family protein; TAIR: AT2G18390.1 ADP-ribosylation factor family protein; Swiss-Prot: sp|Q9ZPX1|ARF5_ARATH ADP-ribosylation factor-like protein 2; TrEMBL-Plants: tr|M5W6X0|M5W6X0_PRUPE Uncharacterized protein; Found in the gene: LotjaGi3g1v0318600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:67415124..67420696) extracted from Lotus japonicus Gifu genome v1.2.
CCCTCCCTTCTCTCTCTCTCAGAAAGAAGCATTTTTGCTTTCTCACTCACCTCCCGCACTCTGACCCACCATCGAATTTC CTTGCTTCGTCGCCGCCATCACTCCTTGATTTCGCATGTAAGCTTCTGATTCCATTGTCCATCCCTCTCTTCTCTCTCAC GAATTTGTGATGTGGTGTTGAAGAATTCCTCTCCCTCACCAAGAACTTCATCTCCTACTACTTTGTAATTTTTTTCTTCA AGCATTTAGAATGAGGGAAAAAGATTAATAGGAAGGAACAAATTCAAAATTAAAAGGAAAATGGGTCTTCTGAGCATCAT TCGGAAAATCAAAAGGAAAGAAAAGGAAATGCGAATCCTTATGGTGTAAGCGCTGCTTCCTACTTCTCTCATTTCCTTCC ATTTCCTTCACCTTAGTAACATTCAAAATCACCTCTTTTGCAGTGGGTTGGACAATTCTGGCAAAACCACAATCGTTTTG AAGATTAATGGCGAGGACACTAGTGTCATCAGTCCTACCCTTGGCTTCAACATCAACACCATCTCCTACCAAACGTAATA AACCTTTCCCTACTTATTTTGTATCAATGTTATATATTTTATTAGAATAGCTCTTGGAGTTTTAATTAAGAGTGAATGGT CAAATTGACACTTAGAAGTGTTCGGCGCCCGGCACCTCCGTCTTTAGAAGAAGGAAATTACTCCCGCGGTCTCTAATTGT GTAAAATACTAACATGACTGACATTTTACATAGGGATCGCGGGGAATCCTGAATCCATGGACGAACTTGCTAGCACCGAA TACTTTCAGGAGCCATTTTGCATGATGATTTCTGCATTCTACTTAAGGGGAAAACATGTGATCTTACTTCTTAATTTGGT TGTTGTATATTCTAAGAGTATAGTAGGTTTGTTTCTTGAATATCTGTGAAAGGTTTTGCTTGTAATTCCTTCAATATACG TTGTTAGCCTTTGTTTTGCTTAGTATCTCGCTGCGATCTTACTGGAGGAACTACTTTGAGCAAACAGATGGTTTGGTTTG GGTAGTTGACAGTTCCGATCTCAGAAGGTTGGATGACTGCAAAATGGAGCTAGATAACCTTCTAAAGGAAGAGGTTCGTT CAGTACAAAATGGTTTTTGCTTATTCCCCCATCAAATTGCTTACAGTACATGCTGTACTTAACTGAAGATATTCAGTCAT TTTTTCTGCCCCTTATTAATTCATGTCCAATATGTTTGATCAATTGGTTGGCATAAACCATTGCGTCATATGTGCCTCTG TATCCAAGCGCAGTCATTGCAAAAAGGGAATGCTTTGCAGGACCCCAAATCCAGTTGCTTTCCTTTCCTTATGATAACTT ACTTACCTCATAGGAGACATGATTTTTTAAATGGTTACCAAAAAATATTAAGTACTTCCATTTAAAAAAGATAGCTGTGT TTGTTTCACCAAAACGAGCTAATAAGTGTTTCTCATTGTTGCTAATTTGGAATGCTCAAATGATTACTCTTTTCTTCGTC GGGGGTTGTGAAGTACTGGTATTTTCAAATCTCAATAGTTTTATGTTTTAAATGACAGCGGCTATCAGGATCATCCTTAC TGATACTAGCAAATAAACAGGACATTAGAGGCGCACTTACACCAGATGAGATAGCTAAGGTAAGCTTACTTTTATTTGGG GGGCGAGGGGGGTTGTTAACTTAGCATTATAGGAACTATGACTATAAAAATACATAATATGTTGAGTTTTAGTGAAACAC ATGATGTTTTTTTTTAACTAAATGGGCCTTTTCCTCTGGTCCTCTCAATCATCTCTTGCAGTGGTTATTTTCTTATTTAA ATAATTGCTTACAGAGCTTCTCATAGAAATAGCTCCAATCAAGTCTCAACCAGGGAGTTTAAATATCCAACCATAAGTAG TTACAGTATTCATTCTGAGTACAAATTTTACATGATAATCTTTTCAGGCGCTGAACTTTGTCTTGGTGTGTATTTGTGGA ACGGCAGTCGGGGAGGCATGGTTGGTAAACTTAACTTAAATGTTGTGTAAAACCAATCATCGTTAGGACTTTCTGGAATA TTTGTTGACTGAACATTATATTATTAGCTGATCTTCTATTCAAACAATGGTTATTGAGAGGTAGTAAGTTTCATGCATGA ATGATCCTACTTCATTGAATTGAATGCATTGACTGATAGGAACCCAATAGTTAGGGATAGGCCCAATACTACTAAAGTCC ATGGGCTGTGCAGGTAGTGGGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGGGGATTATATAAACA TGTATTGTGTGAGAGAGAGGTTAGGCAGAATTTGAGTTAGGAATTGGGAGAGAGAGACACTCTCGAAATTGTCTCATTCT ATCTTTGTTTTTCTACTATTTTCCTTGTAAGCTCTATCATAGAATTTTGGGTTATCTCCAGAATTCTCAGTAAATAATAT ACTGTTTCTACATTTCCTTTCTGAAAAACCGGGTTCTAACATTGTTATCAGAGCATAGTTTACAGTGGAGCATACTTTAA AGTCCACTGTTTTACATTGGTATTTGGTATACCTTTTTTCTCTTTTGAAGTGGGGGGTTTGTAAATGTTGACATTTAAAA TTTATCATTTTATAACGGCTATAAACTCGTAAGCCGAAAGATATATTAGCCAATATATGAGTAGTTAGTTTTTTGCCAAG TCAGGGTAAATAGTTGAATGAGCCTTGCACATGGACGGGATTCATGGACAAATATAGAAGCTTAGGTCTGAGGATGAAGA TGTTTTCATGTATGGGCTTAGAATCTAGGTTTATGATAGAGTGGTGATTAAGCCACCTGTCAAGAAAGTGTATGCTAGGA GAGAAAAGGGAAATGTGGTGGGTTCTTAACCTGTTTACCAGGTCACAATTGCTAGTTATTGTGAGTAGTAGATTGAGTAG GAACTGGCAGAGTAGGTAATAAGTGTAACTGCCAGTGTCATTCTTGTTTCAGTTTAGTGAATAAAAGGGGAAAAATGTTA GGGAATAACCACCTTGTGGTCATTGTGAGTGGGAGAGATCCTGACCTCTCGAATTGTCAGAAGTTGTAATTGCTTTTCTC TGTTAATAGAAATCATTCACTTTCTCTATTCTACTGTTCTTGTTCTTCTTGAACCCTAAATCTCTGGAACACTCTATCAG TTTAAACACGTGGAAATTGGATATGGTGTCACTCCTTAAATATAGGTATAACTGTCACAAGCTTGGGACCAGCCGATACA AATATATAGGTTTTAACAGACAGTTTCTCTGTTCAGGGCACTTTAGATATGGACGGGTTAATACTGTGCTTCAAAAGATA TGTAGGTCATGGAAGCAACAAGAGTCTTTTCTCACTAGGTGGCATTGACAAGGTGTATCAAAAAATTGTCATGATATGTG GTACACATTTAACAAAATAATGTCAAGTAAAATAGTTTGTTCATTTGTCAATATCTGGAACTCTGAATAAGGCTATGTTT GGATAAAATAGGATGGAATGGAGTTGAGTGGAGTGAAATGAAATAGAATAATATTACACTTTCATTGTCTGGATTTTTTT TAGGGAATAGAGAAAAGTACTTGTTTTATCTCATTCCCCCTCCCCTATATTGGATGGAATGGGATGGAATGCATTGTGAT CATGGTCTATTCCATTTCACTCTGTTTTAAAACTTTCAAACAATGGTATCTGTTATAATCTTACTCTACTCCATCAATTC AAACATAACTTAATAGAAGCACCCCAAGCATATTCTTGCAGTAATGTTTCAACAGCTTTGAACCGATTTCAGTAGTTTAG GCGTCAAATTTGTTCAAAGTACTCAATAAATTGATAAGTATTGCAAAATTTGAATTTACTTACTTTCAGAAAACAAGGGA TCTAATTGTTGGATATCATTAATATATAATTGTTTATTGTAAGTGTTTTATTTTCTAATATGCTGTGACTGTGCAGGTGC TGAACTTGGAAGCTATGGATAAATCTCGGCACTGGAATATAGTTGGCTGTAGTGCATACACTGGTGATGGTCTTCTTGAG GGATTTGATTGGATGGTCCAAGACATAGCCTCTAGAATCTACATGCTCGACTAATGATTTTTATGTCATTAGTCATGAAA TGGTTCAACTTAGAAAAGCATCTTAATCTAGGCTTAAAAGCAGTTTATACCCCTCAAGTTTAACACAATTGCGATTCATA CCCCTGTGAATTTTTAGTGCGAAGTGTAACCTACATGTTTCAGAAAGGTGCAAAACCTACCCCTCCGTCAGCCTTCCGTC TAAAACTTGAAAAAAGTGCTGATGTGGCATTTTTAATTTTTTTTTATTAAATTTAAACTTAAAATATTTAATTAAAAATT TCAGGTACCAAACAAACTAAAGAAAATAATAATTTACGGATGAATCATCTTCACCTTCTCCACACCATCGAAACCCACCA CCTCCACCACCAAATCACCCTCTCACCCAACACCACCACCACCACCAAATCCCCCTCTCACCCAACACCACCACTACAAC CATAAATCCCAGCTATCCACGACCCACCATCAAACCCAGCTACCCACGACCATCAAACCCAGCCGCCCATGACCACCACA ACCCACCATCAAACCCAGCCACCCACGACCCACCACAACCCACCATAACCCCAAAACCCACAACCCACAAACCCAACACT AAAAAACCCAAATTTGAAGGGGGAAGAAAGGGATAAACGTGTAGATCTAAAGGAAAACCACAAATCCATCAATTTTTGTT CTTCCCCCTTCAATTTCGCAGTTCAAATTCGTGATCTGGGTTCTGAATGATGATGATGGTGTGGATGATGTTCTTGGGTG TTGTTATTGGGAAAATTGGGTGTTCTGGAAAATTGGGGAAAAGTGGTGGTGTTGTTGTTGTTTGATGTTGATGATGTAGG TGAAGAAGAAGAAGAAGGAATGAAGGTAGGCTGTGTGAAGAAGGTGGCTGCGTGAAGAAGAAGAAGGAATGAAGATGAGT GTTTTTTTTAGTTGGTCCTTAAATTGTTTTTTTTAGTTTTTTTTTGTCCTTGAAATCTTTTTTAGTTTAAATTTAATTAA AAAATGAAAAAAATGTCACGTGAGCTTTGACCGTCAAAAAATAGACGGAAGACGGACGGAGGGGTATGTTTTGCACCTTT CTGAAACATGTAGGTTACACTTCGCACTAAAAATTCACATGGGGTATGAATCGCAATTGGGTTAAACTTGAGGGGTATAA ACTGCTTTTAAGCCCTTAATCTAATATGCCGTCATTGCAGAACATTGTCTGCTGCATCCCGGAAATGTCCCCGCTAGGAT TTCTTTTCTCTTTTTTTCTTTTCAATTCAAGCTTGTAATCTGATCAGTGAATGTAATATGTTTTAGTGATTTAAATTGTT TCCACAGGATATGTATTCAAACTTCATTGCCATAATACTCTCCCAAAAAGAAAGCCAAGTTTGATACATTTTTATGTGAA GATCTAGTTGAGGAACAGGGAAAAAAAACTCCCATCAGCGAAGTATAATTGTA
CDS sequence (LotjaGi3g1v0318600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAGGACACTAGTGTCATCAGTCCTACCCTTGGCTTCAACATCAACACCATCTCCTACCAAACCCTTTGTTTTGCT TAGTATCTCGCTGCGATCTTACTGGAGGAACTACTTTGAGCAAACAGATGGTTTGGTTTGGGTAGTTGACAGTTCCGATC TCAGAAGGTTGGATGACTGCAAAATGGAGCTAGATAACCTTCTAAAGGAAGAGCGGCTATCAGGATCATCCTTACTGATA CTAGCAAATAAACAGGACATTAGAGGCGCACTTACACCAGATGAGATAGCTAAGGTGCTGAACTTGGAAGCTATGGATAA ATCTCGGCACTGGAATATAGTTGGCTGTAGTGCATACACTGGTGATGGTCTTCTTGAGGGATTTGATTGGATGGTCCAAG ACATAGCCTCTAGAATCTACATGCTCGACTAA
Protein sequence (LotjaGi3g1v0318600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARTLVSSVLPLASTSTPSPTKPFVLLSISLRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGSSLLI LANKQDIRGALTPDEIAKVLNLEAMDKSRHWNIVGCSAYTGDGLLEGFDWMVQDIASRIYMLD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 139 | 139 | 4.6E-6 | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| ProSiteProfiles | 1 | 135 | 135 | 11.897 | – | |
| SignalP_GRAM_POSITIVE | 1 | 15 | 15 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 23 | 8 | - | – | |
| Phobius | 24 | 143 | 120 | - | – | |
| Gene3D | 27 | 135 | 109 | 1.8E-33 | – | |
| Pfam | 30 | 135 | 106 | 3.5E-37 | ||
| PANTHER | 30 | 142 | 113 | 5.3E-58 | – | |
| PANTHER | 30 | 142 | 113 | 5.3E-58 | – | |
| SUPERFAMILY | 30 | 137 | 108 | 5.58E-26 | ||
| PRINTS | 31 | 56 | 26 | 4.3E-6 | ||
| PRINTS | 109 | 133 | 25 | 4.3E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0318600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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